RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CAMPP49913 170 aa10.14□□□□□ -0.79
ATG4B-203ENST00000400772 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
ATG4B-203ENST00000400772 MRPL52Q86TS9 123 aaKnown RBP10.14□□□□□ -0.79
ATG4B-203ENST00000400772 TMEM101Q96IK0 257 aa10.14□□□□□ -0.79
ATG4B-203ENST00000400772 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
ATG4B-203ENST00000400772 AP5S1Q9NUS5 200 aa10.14□□□□□ -0.79
ATG4B-203ENST00000400772 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
ATG4B-203ENST00000400772 CIRBPQ14011 172 aaKnown RBP10.13□□□□□ -0.79
ATG4B-203ENST00000400772 BTF3L4Q96K17 158 aa10.13□□□□□ -0.79
ATG4B-203ENST00000400772 IGHV3-64A0A075B6Q5 118 aa10.12□□□□□ -0.79
ATG4B-203ENST00000400772 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
ATG4B-203ENST00000400772 C7orf77A4D0Y5 90 aa10.12□□□□□ -0.79
ATG4B-203ENST00000400772 PPP1R17O96001 155 aa10.12□□□□□ -0.79
ATG4B-203ENST00000400772 HIGD2BQ4VC39 106 aa10.12□□□□□ -0.79
ATG4B-203ENST00000400772 DMBT1Q9UGM3 2413 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-203ENST00000400772 A0A1B0GW15 77 aa10.11□□□□□ -0.79
ATG4B-203ENST00000400772 A0A1B0GXF2 115 aa10.11□□□□□ -0.79
ATG4B-203ENST00000400772 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
ATG4B-203ENST00000400772 XCL1P47992 114 aa10.11□□□□□ -0.79
ATG4B-203ENST00000400772 MRPL54Q6P161 138 aaKnown RBP10.11□□□□□ -0.79
ATG4B-203ENST00000400772 ZNF664Q8N3J9 261 aa10.11□□□□□ -0.79
ATG4B-203ENST00000400772 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
ATG4B-203ENST00000400772 GVQW2A0A096LPI5 108 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-203ENST00000400772 CCL25O15444 150 aa10.1□□□□□ -0.79
ATG4B-203ENST00000400772 CHTF8P0CG12 524 aa10.1□□□□□ -0.79
ATG4B-203ENST00000400772 FCER1GP30273 86 aa10.1□□□□□ -0.79
ATG4B-203ENST00000400772 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
ATG4B-203ENST00000400772 UBE2D4Q9Y2X8 147 aa10.1□□□□□ -0.79
ATG4B-203ENST00000400772 KRTAP29-1A8MX34 341 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-203ENST00000400772 PPP1R2P9O14990 202 aa10.09□□□□□ -0.79
ATG4B-203ENST00000400772 CKS2P33552 79 aa10.09□□□□□ -0.79
ATG4B-203ENST00000400772 HBBP68871 147 aa10.09□□□□□ -0.79
ATG4B-203ENST00000400772 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
ATG4B-203ENST00000400772 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
ATG4B-203ENST00000400772 TNFRSF6BO95407 300 aa10.08□□□□□ -0.8
ATG4B-203ENST00000400772 RPL37AP61513 92 aaKnown RBP10.08□□□□□ -0.8
ATG4B-203ENST00000400772 RPL32P62910 135 aaKnown RBP10.08□□□□□ -0.8
ATG4B-203ENST00000400772 SS18Q15532 418 aa10.08□□□□□ -0.8
ATG4B-203ENST00000400772 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
ATG4B-203ENST00000400772 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
ATG4B-203ENST00000400772 D6R8Y8 96 aa10.07□□□□□ -0.8
ATG4B-203ENST00000400772 COX6A2Q02221 97 aa10.07□□□□□ -0.8
ATG4B-203ENST00000400772 A0A087WYN8 130 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 IGHV1-58A0A0C4DH39 117 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 F8W036 122 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 J3QL48 77 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 S100A8P05109 93 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 HNRNPA3P51991 378 aaKnown RBP10.06□□□□□ -0.8
ATG4B-203ENST00000400772 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
ATG4B-203ENST00000400772 PRSS3P2Q8NHM4 247 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 LINC00526Q96FQ7 95 aa10.06□□□□□ -0.8
ATG4B-203ENST00000400772 NPYP01303 97 aa10.05□□□□□ -0.8
ATG4B-203ENST00000400772 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
ATG4B-203ENST00000400772 DPH3Q96FX2 82 aa10.05□□□□□ -0.8
ATG4B-203ENST00000400772 SMIM2Q9BVW6 85 aa10.05□□□□□ -0.8
ATG4B-203ENST00000400772 ATP5L2Q7Z4Y8 100 aa10.04□□□□□ -0.8
ATG4B-203ENST00000400772 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
ATG4B-203ENST00000400772 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 PHOX2AO14813 284 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 RAB14P61106 215 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
ATG4B-203ENST00000400772 SMAGPQ0VAQ4 97 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 Q6ZUT4 128 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 TMEM18Q96B42 140 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 PLAC8Q9NZF1 115 aa10.03□□□□□ -0.8
ATG4B-203ENST00000400772 TRAV13-1A0A0B4J241 112 aa10.02□□□□□ -0.81
ATG4B-203ENST00000400772 TCAPO15273 167 aa10.02□□□□□ -0.81
ATG4B-203ENST00000400772 PPBPP02775 128 aa10.02□□□□□ -0.81
ATG4B-203ENST00000400772 PNRC1Q12796 327 aaPredicted RBP10.02□□□□□ -0.81
ATG4B-203ENST00000400772 CLLU1Q5K131 121 aa10.01□□□□□ -0.81
ATG4B-203ENST00000400772 TMEM136Q6ZRR5 245 aa10.01□□□□□ -0.81
ATG4B-203ENST00000400772 ANAPC16Q96DE5 110 aa10.01□□□□□ -0.81
ATG4B-203ENST00000400772 A0A096LNI7 61 aa10□□□□□ -0.81
ATG4B-203ENST00000400772 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
ATG4B-203ENST00000400772 MAJINQ3KP22 176 aa10□□□□□ -0.81
ATG4B-203ENST00000400772 ORMDL3Q8N138 153 aa10□□□□□ -0.81
ATG4B-203ENST00000400772 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
ATG4B-203ENST00000400772 ZNF561-AS1K7EIQ3 104 aa9.99□□□□□ -0.81
ATG4B-203ENST00000400772 COX7A2LO14548 114 aa9.99□□□□□ -0.81
ATG4B-203ENST00000400772 OXTP01178 125 aa9.99□□□□□ -0.81
ATG4B-203ENST00000400772 MT-ND4LP03901 98 aa9.99□□□□□ -0.81
ATG4B-203ENST00000400772 CARD19Q96LW7 228 aa9.99□□□□□ -0.81
ATG4B-203ENST00000400772 PRELID3AQ96N28 172 aa9.99□□□□□ -0.81
ATG4B-203ENST00000400772 IGLV4-69A0A075B6H9 119 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 PRSS47A8MTI9 375 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 MALP21145 153 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 IFITM2Q01629 132 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 SPANXA1Q9NS26 97 aa9.98□□□□□ -0.81
ATG4B-203ENST00000400772 MRPS36P82909 103 aaKnown RBP9.97□□□□□ -0.81
ATG4B-203ENST00000400772 STPG4Q8N801 248 aa9.97□□□□□ -0.81
ATG4B-203ENST00000400772 ADCYAP1P18509 176 aa9.96□□□□□ -0.82
ATG4B-203ENST00000400772 Q6ZRU5 148 aa9.96□□□□□ -0.82
ATG4B-203ENST00000400772 RAB5AP20339 215 aa9.95□□□□□ -0.82
ATG4B-203ENST00000400772 IGHV3OR16-9A0A0B4J2B5 98 aa9.94□□□□□ -0.82
ATG4B-203ENST00000400772 LOC389332A0A1B0GUA5 103 aa9.94□□□□□ -0.82
ATG4B-203ENST00000400772 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
ATG4B-203ENST00000400772 LAMTOR2Q9Y2Q5 125 aa9.94□□□□□ -0.82
ATG4B-203ENST00000400772 PYGO1Q9Y3Y4 419 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms