RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SPRY4Q9C004 299 aa10.24□□□□□ -0.77
VAPA-202ENST00000400000 CDSNQ15517 529 aa10.24□□□□□ -0.77
VAPA-202ENST00000400000 PLXNB1O43157 2135 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 SNURFQ9Y675 71 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 ARHGAP32A7KAX9 2087 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 BRI3O95415 125 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 C20orf197Q8N268 126 aa10.23□□□□□ -0.77
VAPA-202ENST00000400000 COL4A4P53420 1690 aaPredicted RBP10.23□□□□□ -0.77
VAPA-202ENST00000400000 NDUFC2O95298 119 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 NDUFV3P56181 108 aaKnown RBP10.22□□□□□ -0.77
VAPA-202ENST00000400000 K7EQG2 157 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 LRRC75A-AS1Q8N1F1 130 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 KRTAP10-9P60411 292 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 X6R8D5 127 aa10.22□□□□□ -0.77
VAPA-202ENST00000400000 C6orf99Q4VX62 202 aa10.21□□□□□ -0.77
VAPA-202ENST00000400000 TMEM89A2RUT3 159 aa10.21□□□□□ -0.77
VAPA-202ENST00000400000 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
VAPA-202ENST00000400000 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.77
VAPA-202ENST00000400000 IGLV4-3A0A075B6K6 122 aa10.21□□□□□ -0.78
VAPA-202ENST00000400000 SYCNQ0VAF6 134 aa10.21□□□□□ -0.78
VAPA-202ENST00000400000 LINC01006Q8NI28 216 aa10.21□□□□□ -0.78
VAPA-202ENST00000400000 EXPH5Q8NEV8 1989 aa10.21□□□□□ -0.78
VAPA-202ENST00000400000 SONP18583 2426 aaKnown RBP10.2□□□□□ -0.78
VAPA-202ENST00000400000 IGLV2-11P01706 119 aa10.2□□□□□ -0.78
VAPA-202ENST00000400000 CCKP06307 115 aa10.2□□□□□ -0.78
VAPA-202ENST00000400000 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
VAPA-202ENST00000400000 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
VAPA-202ENST00000400000 CSPG4Q6UVK1 2322 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 PLAC8L1A1L4L8 177 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 CRIP1P50238 77 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 ZNF702PQ9H963 129 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 UBE2D2P62837 147 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 FBXL19-AS1Q494R0 122 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 SPANXCQ9NY87 97 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 BRWD1-AS2P59051 145 aa10.19□□□□□ -0.78
VAPA-202ENST00000400000 H3BQ85 93 aa10.18□□□□□ -0.78
VAPA-202ENST00000400000 IGLC6P0CF74 106 aa10.18□□□□□ -0.78
VAPA-202ENST00000400000 Q6ZPA2 131 aa10.18□□□□□ -0.78
VAPA-202ENST00000400000 SPG11Q96JI7 2443 aa10.18□□□□□ -0.78
VAPA-202ENST00000400000 TMEM223A0PJW6 202 aa10.18□□□□□ -0.78
VAPA-202ENST00000400000 MT-ATP8P03928 68 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 NOTCH2Q04721 2471 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 ALPK3Q96L96 1907 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 NDUFA7O95182 113 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 MIFP14174 115 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 SPANXDQ9BXN6 97 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 HIVEP3Q5T1R4 2406 aa10.17□□□□□ -0.78
VAPA-202ENST00000400000 PRRC2AP48634 2157 aaKnown RBP10.17□□□□□ -0.78
VAPA-202ENST00000400000 ZNF22P17026 224 aaPredicted RBP10.16□□□□□ -0.78
VAPA-202ENST00000400000 J3KT08 172 aa10.16□□□□□ -0.78
VAPA-202ENST00000400000 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
VAPA-202ENST00000400000 TRIAP1O43715 76 aa10.16□□□□□ -0.78
VAPA-202ENST00000400000 LINC00308Q8TCZ7 52 aa10.16□□□□□ -0.78
VAPA-202ENST00000400000 RAI1Q7Z5J4 1906 aaPredicted RBP10.16□□□□□ -0.78
VAPA-202ENST00000400000 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
VAPA-202ENST00000400000 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
VAPA-202ENST00000400000 KIR2DL5BQ8NHK3 375 aa10.15□□□□□ -0.78
VAPA-202ENST00000400000 RBX1P62877 108 aa10.15□□□□□ -0.78
VAPA-202ENST00000400000 PRR9Q5T870 116 aa10.15□□□□□ -0.78
VAPA-202ENST00000400000 M0QY20 66 aa10.15□□□□□ -0.78
VAPA-202ENST00000400000 C9orf116Q5BN46 136 aaPredicted RBP10.15□□□□□ -0.78
VAPA-202ENST00000400000 SMIM9A6NGZ8 99 aa10.15□□□□□ -0.79
VAPA-202ENST00000400000 G3V4G9 280 aa10.14□□□□□ -0.79
VAPA-202ENST00000400000 HCFC1P51610 2035 aa10.14□□□□□ -0.79
VAPA-202ENST00000400000 GAS8-AS1O95177 125 aa10.13□□□□□ -0.79
VAPA-202ENST00000400000 H3BT86 120 aa10.13□□□□□ -0.79
VAPA-202ENST00000400000 Q6ZSR3 168 aa10.13□□□□□ -0.79
VAPA-202ENST00000400000 CRIP2P52943 208 aaPredicted RBP10.12□□□□□ -0.79
VAPA-202ENST00000400000 C11orf71Q6IPW1 123 aa10.12□□□□□ -0.79
VAPA-202ENST00000400000 Q6ZQY7 126 aa10.12□□□□□ -0.79
VAPA-202ENST00000400000 MBD6Q96DN6 1003 aa10.11□□□□□ -0.79
VAPA-202ENST00000400000 IGLV4-69A0A075B6H9 119 aa10.11□□□□□ -0.79
VAPA-202ENST00000400000 RNF185Q96GF1 192 aa10.11□□□□□ -0.79
VAPA-202ENST00000400000 PRR3P79522 188 aaKnown RBP10.11□□□□□ -0.79
VAPA-202ENST00000400000 AVPP01185 164 aa10.1□□□□□ -0.79
VAPA-202ENST00000400000 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
VAPA-202ENST00000400000 NUPR2A6NF83 97 aa10.1□□□□□ -0.79
VAPA-202ENST00000400000 SPANXB1Q9NS25 103 aaPredicted RBP10.1□□□□□ -0.79
VAPA-202ENST00000400000 A0A1B0GXF2 115 aa10.1□□□□□ -0.79
VAPA-202ENST00000400000 LINC00959A0A1B0GUT2 108 aa10.1□□□□□ -0.79
VAPA-202ENST00000400000 K7ERS5 55 aa10.1□□□□□ -0.79
VAPA-202ENST00000400000 DEFB116Q30KQ4 102 aa10.09□□□□□ -0.79
VAPA-202ENST00000400000 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
VAPA-202ENST00000400000 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
VAPA-202ENST00000400000 LINC00643Q86TS7 51 aa10.08□□□□□ -0.8
VAPA-202ENST00000400000 TSHBP01222 138 aa10.08□□□□□ -0.8
VAPA-202ENST00000400000 Q6ZVQ6 151 aa10.08□□□□□ -0.8
VAPA-202ENST00000400000 TRBV6-4A0A1B0GX49 114 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 IBA57-AS1B1ANH7 110 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 SPINK1P00995 79 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 IGLV5-52A0A0A0MRZ9 124 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 MUC4Q99102 2169 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
VAPA-202ENST00000400000 MRPS12O15235 138 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms