RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 C9orf85Q96MD7 179 aa8.2□□□□□ -1.1
HPS4-202ENST00000398145 A0A0C4DFX4 3053 aa8.2□□□□□ -1.1
HPS4-202ENST00000398145 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
HPS4-202ENST00000398145 Q6ZTI0 123 aa8.19□□□□□ -1.1
HPS4-202ENST00000398145 APOC4P55056 127 aa8.19□□□□□ -1.1
HPS4-202ENST00000398145 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
HPS4-202ENST00000398145 FAM240AA0A1B0GVK7 77 aa8.19□□□□□ -1.1
HPS4-202ENST00000398145 CXCL5P42830 114 aa8.19□□□□□ -1.1
HPS4-202ENST00000398145 CRIP2P52943 208 aaPredicted RBP8.19□□□□□ -1.1
HPS4-202ENST00000398145 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
HPS4-202ENST00000398145 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
HPS4-202ENST00000398145 PRO3102Q9H379 93 aa8.18□□□□□ -1.1
HPS4-202ENST00000398145 H3BQ85 93 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 NDUFA7O95182 113 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 MRAPQ8TCY5 172 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 DCANP1Q8TF63 244 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 POM121L12Q8N7R1 296 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 C1orf43Q9BWL3 253 aa8.17□□□□□ -1.1
HPS4-202ENST00000398145 IBA57-AS1B1ANH7 110 aa8.16□□□□□ -1.1
HPS4-202ENST00000398145 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
HPS4-202ENST00000398145 NRGNQ92686 78 aa8.16□□□□□ -1.1
HPS4-202ENST00000398145 UBE2D4Q9Y2X8 147 aa8.16□□□□□ -1.1
HPS4-202ENST00000398145 PDE6GP18545 87 aa8.16□□□□□ -1.1
HPS4-202ENST00000398145 NCR3O14931 201 aa8.15□□□□□ -1.1
HPS4-202ENST00000398145 FAM222AQ5U5X8 452 aa8.15□□□□□ -1.1
HPS4-202ENST00000398145 CDIP1Q9H305 208 aa8.15□□□□□ -1.1
HPS4-202ENST00000398145 PRRC2AP48634 2157 aaKnown RBP8.15□□□□□ -1.11
HPS4-202ENST00000398145 FUSP35637 526 aaKnown RBP eCLIP8.14□□□□□ -1.11
HPS4-202ENST00000398145 SPAG11BQ08648 103 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 NREPQ16612 68 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 C10orf99Q6UWK7 81 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 CAMK2N2Q96S95 79 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 SLPIP03973 132 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 ATP5EP2Q5VTU8 51 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 FN1P02751 2386 aaKnown RBP8.14□□□□□ -1.11
HPS4-202ENST00000398145 UPK3BQ9BT76 320 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 ABCA12Q86UK0 2595 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 PTPRBP23467 1997 aa8.14□□□□□ -1.11
HPS4-202ENST00000398145 COX7CP15954 63 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 DEFB114Q30KQ6 69 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 DEFB105AQ8NG35 78 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 ESM1Q9NQ30 184 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 PRO0255Q9UI72 69 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 DIRC1Q969H9 104 aa8.13□□□□□ -1.11
HPS4-202ENST00000398145 RPL18AQ02543 176 aaKnown RBP8.13□□□□□ -1.11
HPS4-202ENST00000398145 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
HPS4-202ENST00000398145 PRB1P04280 392 aa8.12□□□□□ -1.11
HPS4-202ENST00000398145 USP17L23D6RBM5 183 aa8.12□□□□□ -1.11
HPS4-202ENST00000398145 PKD1L2Q7Z442 2459 aa8.12□□□□□ -1.11
HPS4-202ENST00000398145 DEFB113Q30KQ7 82 aa8.11□□□□□ -1.11
HPS4-202ENST00000398145 C19orf84I3L1E1 186 aa8.11□□□□□ -1.11
HPS4-202ENST00000398145 C5orf47Q569G3 176 aa8.11□□□□□ -1.11
HPS4-202ENST00000398145 ENHOQ6UWT2 76 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 PRO0461Q9UI25 63 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 PRM2P04554 102 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 Q6ZSV7 163 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 ZNF580Q9UK33 172 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 IGKV2D-24A0A075B6R9 120 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 M0QXV9 152 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 SPART-AS1P0CW21 52 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
HPS4-202ENST00000398145 TRBV6-8A0A0A6YYG3 113 aa8.09□□□□□ -1.11
HPS4-202ENST00000398145 LINC00242Q5T6M2 205 aa8.09□□□□□ -1.11
HPS4-202ENST00000398145 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
HPS4-202ENST00000398145 PSCAO43653 123 aa8.09□□□□□ -1.11
HPS4-202ENST00000398145 SMCPP49901 116 aaPredicted RBP8.09□□□□□ -1.11
HPS4-202ENST00000398145 HIGD2BQ4VC39 106 aa8.09□□□□□ -1.11
HPS4-202ENST00000398145 CITED2Q99967 270 aaPredicted RBP8.09□□□□□ -1.11
HPS4-202ENST00000398145 KLK12Q9UKR0 248 aa8.09□□□□□ -1.11
HPS4-202ENST00000398145 FAM236DA0A1B0GTK5 79 aa8.09□□□□□ -1.12
HPS4-202ENST00000398145 FAM236CP0DP71 79 aa8.09□□□□□ -1.12
HPS4-202ENST00000398145 SMIM11BQ8TCY0 68 aa8.09□□□□□ -1.12
HPS4-202ENST00000398145 AMELXQ99217 191 aa8.08□□□□□ -1.12
HPS4-202ENST00000398145 IGHV4-28A0A0C4DH34 117 aa8.08□□□□□ -1.12
HPS4-202ENST00000398145 CDK2AP2O75956 126 aa8.08□□□□□ -1.12
HPS4-202ENST00000398145 Q6YL49 198 aa8.08□□□□□ -1.12
HPS4-202ENST00000398145 ETDCA0A1B0GVM5 59 aa8.08□□□□□ -1.12
HPS4-202ENST00000398145 LINC00269Q8N2A0 174 aa8.08□□□□□ -1.12
HPS4-202ENST00000398145 C6orf99Q4VX62 202 aa8.07□□□□□ -1.12
HPS4-202ENST00000398145 NDUFC2O95298 119 aa8.07□□□□□ -1.12
HPS4-202ENST00000398145 RAI1Q7Z5J4 1906 aaPredicted RBP8.07□□□□□ -1.12
HPS4-202ENST00000398145 CDSNQ15517 529 aa8.07□□□□□ -1.12
HPS4-202ENST00000398145 COX7BP24311 80 aa8.07□□□□□ -1.12
HPS4-202ENST00000398145 KIF25-AS1Q9Y6Z4 181 aa8.07□□□□□ -1.12
HPS4-202ENST00000398145 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
HPS4-202ENST00000398145 EDN2P20800 178 aa8.06□□□□□ -1.12
HPS4-202ENST00000398145 SMIM1B2RUZ4 78 aa8.06□□□□□ -1.12
HPS4-202ENST00000398145 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
HPS4-202ENST00000398145 REG3AQ06141 175 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 LRRC75A-AS1Q8N1F1 130 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 COL4A2P08572 1712 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 BRCA2P51587 3418 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 DEFB4AO15263 64 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 DEFB135Q30KP9 77 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
HPS4-202ENST00000398145 CCL18P55774 89 aa8.05□□□□□ -1.12
HPS4-202ENST00000398145 Q6JHZ5 121 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms