RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 HIST2H2BCQ6DN03 193 aa15.88■□□□□ 0.13
NFIX-203ENST00000397661 NHLRC4P0CG21 123 aaPredicted RBP15.87■□□□□ 0.13
NFIX-203ENST00000397661 CLEC2BQ92478 149 aa15.87■□□□□ 0.13
NFIX-203ENST00000397661 M0R2P5 195 aa15.86■□□□□ 0.13
NFIX-203ENST00000397661 TTC32Q5I0X7 151 aa15.86■□□□□ 0.13
NFIX-203ENST00000397661 DGAT2L7PQ6IED9 249 aa15.86■□□□□ 0.13
NFIX-203ENST00000397661 ATXN8Q156A1 80 aa15.86■□□□□ 0.13
NFIX-203ENST00000397661 FAM104AQ969W3 186 aa15.86■□□□□ 0.13
NFIX-203ENST00000397661 MAP6D1Q9H9H5 199 aa15.86■□□□□ 0.13
NFIX-203ENST00000397661 NDUFA12Q9UI09 145 aa15.85■□□□□ 0.13
NFIX-203ENST00000397661 GAGE5Q13069 117 aa15.85■□□□□ 0.13
NFIX-203ENST00000397661 GAGE6Q13070 117 aa15.85■□□□□ 0.13
NFIX-203ENST00000397661 CITED1Q99966 193 aa15.85■□□□□ 0.13
NFIX-203ENST00000397661 CCDC179H3BU77 68 aa15.85■□□□□ 0.13
NFIX-203ENST00000397661 TRGV1A0A0A0MS02 117 aa15.84■□□□□ 0.13
NFIX-203ENST00000397661 C2orf82Q6UX34 121 aa15.84■□□□□ 0.13
NFIX-203ENST00000397661 HIVEP2P31629 2446 aa15.84■□□□□ 0.13
NFIX-203ENST00000397661 TRAV8-4A0A0B4J246 113 aa15.84■□□□□ 0.13
NFIX-203ENST00000397661 C15orf53Q8NAA6 179 aa15.84■□□□□ 0.13
NFIX-203ENST00000397661 NDUFV3P56181 108 aaKnown RBP15.83■□□□□ 0.12
NFIX-203ENST00000397661 ZNF415Q09FC8 603 aa15.83■□□□□ 0.12
NFIX-203ENST00000397661 A0A0B4J2C4 111 aa15.82■□□□□ 0.12
NFIX-203ENST00000397661 ITPR2Q14571 2701 aa15.81■□□□□ 0.12
NFIX-203ENST00000397661 GCN1Q92616 2671 aaKnown RBP15.81■□□□□ 0.12
NFIX-203ENST00000397661 CDKN2A-AS1Q9UH64 79 aa15.81■□□□□ 0.12
NFIX-203ENST00000397661 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.81■□□□□ 0.12
NFIX-203ENST00000397661 TRAV13-1A0A0B4J241 112 aa15.81■□□□□ 0.12
NFIX-203ENST00000397661 TMEM89A2RUT3 159 aa15.81■□□□□ 0.12
NFIX-203ENST00000397661 CHCHD7Q9BUK0 85 aa15.81■□□□□ 0.12
NFIX-203ENST00000397661 IGKV3OR2-268A0A0C4DH90 116 aa15.8■□□□□ 0.12
NFIX-203ENST00000397661 CR1P17927 2039 aa15.8■□□□□ 0.12
NFIX-203ENST00000397661 J3QLI3 93 aa15.8■□□□□ 0.12
NFIX-203ENST00000397661 SVIPQ8NHG7 77 aa15.8■□□□□ 0.12
NFIX-203ENST00000397661 PEMTQ9UBM1 199 aa15.8■□□□□ 0.12
NFIX-203ENST00000397661 UBR5O95071 2799 aaPredicted RBP15.79■□□□□ 0.12
NFIX-203ENST00000397661 UBE2WQ96B02 151 aa15.79■□□□□ 0.12
NFIX-203ENST00000397661 WFDC10AQ9H1F0 79 aa15.79■□□□□ 0.12
NFIX-203ENST00000397661 UBE2D4Q9Y2X8 147 aa15.79■□□□□ 0.12
NFIX-203ENST00000397661 DEFB114Q30KQ6 69 aa15.78■□□□□ 0.12
NFIX-203ENST00000397661 IFITM1P13164 125 aa15.78■□□□□ 0.12
NFIX-203ENST00000397661 PLA2G2AP14555 144 aa15.78■□□□□ 0.12
NFIX-203ENST00000397661 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.78■□□□□ 0.12
NFIX-203ENST00000397661 TRBV10-2A0A0K0K1G8 114 aa15.77■□□□□ 0.12
NFIX-203ENST00000397661 STHQ8IWL8 128 aa15.77■□□□□ 0.12
NFIX-203ENST00000397661 ICOSQ9Y6W8 199 aa15.77■□□□□ 0.12
NFIX-203ENST00000397661 COX6A2Q02221 97 aa15.77■□□□□ 0.11
NFIX-203ENST00000397661 H7C423 109 aa15.77■□□□□ 0.11
NFIX-203ENST00000397661 IGHV1-58A0A0C4DH39 117 aa15.76■□□□□ 0.11
NFIX-203ENST00000397661 LINC00694P0DN24 101 aa15.76■□□□□ 0.11
NFIX-203ENST00000397661 INSP01308 110 aa15.76■□□□□ 0.11
NFIX-203ENST00000397661 MRPS36P82909 103 aaKnown RBP15.76■□□□□ 0.11
NFIX-203ENST00000397661 LITAFQ99732 161 aa15.76■□□□□ 0.11
NFIX-203ENST00000397661 Q6ZTI0 123 aa15.75■□□□□ 0.11
NFIX-203ENST00000397661 GAGE12JA6NER3 117 aa15.75■□□□□ 0.11
NFIX-203ENST00000397661 GAGE4Q13068 117 aa15.75■□□□□ 0.11
NFIX-203ENST00000397661 C11orf72Q8NBR9 251 aa15.75■□□□□ 0.11
NFIX-203ENST00000397661 GAGE7O76087 117 aa15.74■□□□□ 0.11
NFIX-203ENST00000397661 GAGE12FP0CL80 117 aa15.74■□□□□ 0.11
NFIX-203ENST00000397661 GAGE12GP0CL81 117 aa15.74■□□□□ 0.11
NFIX-203ENST00000397661 GAGE12IP0CL82 117 aa15.74■□□□□ 0.11
NFIX-203ENST00000397661 ODF3L2Q3SX64 289 aa15.74■□□□□ 0.11
NFIX-203ENST00000397661 VSIG2Q96IQ7 327 aa15.74■□□□□ 0.11
NFIX-203ENST00000397661 RPL35AP18077 110 aaKnown RBP15.73■□□□□ 0.11
NFIX-203ENST00000397661 DEFB113Q30KQ7 82 aa15.73■□□□□ 0.11
NFIX-203ENST00000397661 WFDC11Q8NEX6 87 aa15.73■□□□□ 0.11
NFIX-203ENST00000397661 TRBV30A0A0K0K1B3 111 aa15.72■□□□□ 0.11
NFIX-203ENST00000397661 COX6CP09669 75 aa15.71■□□□□ 0.11
NFIX-203ENST00000397661 RPL13AP40429 203 aaKnown RBP15.71■□□□□ 0.11
NFIX-203ENST00000397661 NOP10Q9NPE3 64 aaKnown RBP15.71■□□□□ 0.11
NFIX-203ENST00000397661 PYGO1Q9Y3Y4 419 aa15.71■□□□□ 0.11
NFIX-203ENST00000397661 RS1O15537 224 aa15.7■□□□□ 0.1
NFIX-203ENST00000397661 C4orf3Q8WVX3 66 aa15.7■□□□□ 0.1
NFIX-203ENST00000397661 C1orf158Q8N1D5 194 aa15.7■□□□□ 0.1
NFIX-203ENST00000397661 Q9H8V8 135 aa15.7■□□□□ 0.1
NFIX-203ENST00000397661 CHCHD5Q9BSY4 110 aa15.69■□□□□ 0.1
NFIX-203ENST00000397661 FSHBP01225 129 aa15.69■□□□□ 0.1
NFIX-203ENST00000397661 SMIM20Q8N5G0 67 aa15.69■□□□□ 0.1
NFIX-203ENST00000397661 TMEM101Q96IK0 257 aa15.69■□□□□ 0.1
NFIX-203ENST00000397661 LOC100131303A0A0U1RQF7 123 aa15.68■□□□□ 0.1
NFIX-203ENST00000397661 TINCRA0A1B0GVN0 87 aa15.67■□□□□ 0.1
NFIX-203ENST00000397661 CITED2Q99967 270 aaPredicted RBP15.67■□□□□ 0.1
NFIX-203ENST00000397661 SPANXA1Q9NS26 97 aa15.67■□□□□ 0.1
NFIX-203ENST00000397661 TENM4Q6N022 2769 aa15.66■□□□□ 0.1
NFIX-203ENST00000397661 CCL24O00175 119 aa15.66■□□□□ 0.1
NFIX-203ENST00000397661 MIAQ16674 131 aa15.66■□□□□ 0.1
NFIX-203ENST00000397661 RNF152Q8N8N0 203 aa15.66■□□□□ 0.1
NFIX-203ENST00000397661 DNAJC9-AS1A6NH13 148 aa15.65■□□□□ 0.1
NFIX-203ENST00000397661 MEIG1Q5JSS6 88 aa15.65■□□□□ 0.1
NFIX-203ENST00000397661 ZNF843Q8N446 348 aa15.65■□□□□ 0.1
NFIX-203ENST00000397661 FASNP49327 2511 aaKnown RBP15.64■□□□□ 0.09
NFIX-203ENST00000397661 TRGV2A0A075B6R0 118 aa15.64■□□□□ 0.09
NFIX-203ENST00000397661 ESM1Q9NQ30 184 aa15.64■□□□□ 0.09
NFIX-203ENST00000397661 TOMM7Q9P0U1 55 aa15.63■□□□□ 0.09
NFIX-203ENST00000397661 HELZ2Q9BYK8 2649 aaKnown RBP15.63■□□□□ 0.09
NFIX-203ENST00000397661 NTM-AS1Q6ZSK4 140 aa15.63■□□□□ 0.09
NFIX-203ENST00000397661 M0QXV9 152 aa15.62■□□□□ 0.09
NFIX-203ENST00000397661 LINC00242Q5T6M2 205 aa15.62■□□□□ 0.09
NFIX-203ENST00000397661 RPL36AP83881 106 aaKnown RBP15.61■□□□□ 0.09
NFIX-203ENST00000397661 PRIMA1Q86XR5 153 aa15.61■□□□□ 0.09
NFIX-203ENST00000397661 RPL36ALQ969Q0 106 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms