RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 IGIPA6NJ69 53 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 KLK5Q9Y337 293 aaPredicted RBP4.08□□□□□ -1.76
PTPRD-205ENST00000397611 TMEM223A0PJW6 202 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 COX7A2LO14548 114 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 ELANEP08246 267 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 COX7B2Q8TF08 81 aa4.08□□□□□ -1.76
PTPRD-205ENST00000397611 TRBV30A0A0K0K1B3 111 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 H0YGX0 51 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 CLPSL2Q6UWE3 100 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 UPK3BQ9BT76 320 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 DEFB130BP0DP73 79 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 DEFB130AP0DP74 79 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 COX7CP15954 63 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 VSIG2Q96IQ7 327 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 RAI1Q7Z5J4 1906 aaPredicted RBP4.07□□□□□ -1.76
PTPRD-205ENST00000397611 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
PTPRD-205ENST00000397611 ZFP36P26651 326 aaKnown RBP4.07□□□□□ -1.76
PTPRD-205ENST00000397611 TMEM263Q8WUH6 116 aaKnown RBP4.07□□□□□ -1.76
PTPRD-205ENST00000397611 AGRNO00468 2067 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 C9orf85Q96MD7 179 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 A6NDX4 124 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 Q6Q795 121 aa4.07□□□□□ -1.76
PTPRD-205ENST00000397611 NCR3O14931 201 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 A8MZ25 164 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 J3QLI3 93 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 H7C423 109 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 WFDC9Q8NEX5 89 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 TIMM17BO60830 172 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 SLPIP03973 132 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 F8WEM9 126 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 RNASE3P12724 160 aaKnown RBP4.06□□□□□ -1.76
PTPRD-205ENST00000397611 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
PTPRD-205ENST00000397611 PRORYQ9H606 182 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 A0A096LPF7 62 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 USP17L23D6RBM5 183 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 XCL1P47992 114 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 MGAQ8IWI9 3026 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 K7EQG2 157 aa4.06□□□□□ -1.76
PTPRD-205ENST00000397611 C5orf38Q86SI9 138 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 IGHV4-28A0A0C4DH34 117 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 RPL18AQ02543 176 aaKnown RBP4.05□□□□□ -1.76
PTPRD-205ENST00000397611 FAM240AA0A1B0GVK7 77 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 MIR7-3HGQ8N6C7 128 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 BPESC1Q9GZL8 116 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 MDFICQ9P1T7 246 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 DPH3Q96FX2 82 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
PTPRD-205ENST00000397611 AKAP13Q12802 2813 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 LINC00467Q9BRT7 94 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 LST1O00453 97 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 A0A087WVE0 104 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 JMJD7-PLA2G4BH0Y9G9 81 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 TIRAPP58753 221 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 LINC01356Q8N9X3 169 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 SCXQ7RTU7 201 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 IMUPQ9GZP8 106 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
PTPRD-205ENST00000397611 HIST2H2BCQ6DN03 193 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 HIST2H2BDQ6DRA6 164 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 DEFB105AQ8NG35 78 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 A0A1W2PPR1 153 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 GRNP28799 593 aaKnown RBP4.03□□□□□ -1.76
PTPRD-205ENST00000397611 Q6ZSV7 163 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 M0QY20 66 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 CRYGDP07320 174 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 DCANP1Q8TF63 244 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 IGLV4-3A0A075B6K6 122 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 PRR9Q5T870 116 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 C20orf173Q96LM9 149 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 TRBV10-1A0A0K0K1A3 114 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 MSMBP08118 114 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 TSPEAR-AS2P59090 65 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 MRPL55Q7Z7F7 128 aaKnown RBP4.03□□□□□ -1.76
PTPRD-205ENST00000397611 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
PTPRD-205ENST00000397611 K7EQD1 137 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 AMELXQ99217 191 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 ANKRD17O75179 2603 aaKnown RBP4.02□□□□□ -1.77
PTPRD-205ENST00000397611 SMCPP49901 116 aaPredicted RBP4.02□□□□□ -1.77
PTPRD-205ENST00000397611 UNQ9165/PRO28630Q6UXU0 137 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 NRGNQ92686 78 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 NOP10Q9NPE3 64 aaKnown RBP4.02□□□□□ -1.77
PTPRD-205ENST00000397611 CDKN2A-AS1Q9UH64 79 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 LAMA1P25391 3075 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 CXCL5P42830 114 aa4.02□□□□□ -1.77
PTPRD-205ENST00000397611 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 IGLV5-45A0A087WSX0 123 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 MRPS36P82909 103 aaKnown RBP4.01□□□□□ -1.77
PTPRD-205ENST00000397611 ABCA2Q9BZC7 2435 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 ARHGAP32A7KAX9 2087 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 REV3LO60673 3130 aa4.01□□□□□ -1.77
PTPRD-205ENST00000397611 ZNF561-AS1K7EIQ3 104 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms