RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 PAPPA-AS1Q5QFB9 102 aa10.59□□□□□ -0.71
SREBF1-205ENST00000395757 Q6ZTI0 123 aa10.59□□□□□ -0.71
SREBF1-205ENST00000395757 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
SREBF1-205ENST00000395757 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
SREBF1-205ENST00000395757 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
SREBF1-205ENST00000395757 LINC00315P59091 139 aa10.58□□□□□ -0.72
SREBF1-205ENST00000395757 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
SREBF1-205ENST00000395757 TRAV12-1A0A0B4J245 112 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 SEC61GP60059 68 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 CLPSL2Q6UWE3 100 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 ZMAT4Q9H898 229 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 F8P00451 2351 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 FOXI1Q12951 378 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 DEFB114Q30KQ6 69 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 KIF25-AS1Q9Y6Z4 181 aa10.57□□□□□ -0.72
SREBF1-205ENST00000395757 TMEM141Q96I45 108 aa10.56□□□□□ -0.72
SREBF1-205ENST00000395757 CDIP1Q9H305 208 aa10.56□□□□□ -0.72
SREBF1-205ENST00000395757 HIGD1BQ9P298 99 aa10.56□□□□□ -0.72
SREBF1-205ENST00000395757 NDUFA12Q9UI09 145 aa10.56□□□□□ -0.72
SREBF1-205ENST00000395757 MUSTN1Q8IVN3 82 aa10.56□□□□□ -0.72
SREBF1-205ENST00000395757 CHCHD5Q9BSY4 110 aa10.56□□□□□ -0.72
SREBF1-205ENST00000395757 C9JAW5 83 aa10.55□□□□□ -0.72
SREBF1-205ENST00000395757 HRCT1Q6UXD1 115 aa10.55□□□□□ -0.72
SREBF1-205ENST00000395757 LINC00467Q9BRT7 94 aa10.55□□□□□ -0.72
SREBF1-205ENST00000395757 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
SREBF1-205ENST00000395757 A8MWV9 139 aa10.55□□□□□ -0.72
SREBF1-205ENST00000395757 MORN3Q6PF18 240 aaPredicted RBP10.55□□□□□ -0.72
SREBF1-205ENST00000395757 C9orf85Q96MD7 179 aa10.55□□□□□ -0.72
SREBF1-205ENST00000395757 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
SREBF1-205ENST00000395757 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
SREBF1-205ENST00000395757 NHLRC4P0CG21 123 aaPredicted RBP10.54□□□□□ -0.72
SREBF1-205ENST00000395757 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
SREBF1-205ENST00000395757 LGALS9O00182 355 aa10.53□□□□□ -0.72
SREBF1-205ENST00000395757 RPL36AP83881 106 aaKnown RBP10.53□□□□□ -0.72
SREBF1-205ENST00000395757 RPL36ALQ969Q0 106 aaKnown RBP10.53□□□□□ -0.72
SREBF1-205ENST00000395757 A0A0J9YY99 117 aa10.53□□□□□ -0.72
SREBF1-205ENST00000395757 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
SREBF1-205ENST00000395757 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
SREBF1-205ENST00000395757 C9orf153Q5TBE3 101 aa10.53□□□□□ -0.72
SREBF1-205ENST00000395757 RHODO00212 210 aa10.52□□□□□ -0.72
SREBF1-205ENST00000395757 ZNF22P17026 224 aaPredicted RBP10.52□□□□□ -0.72
SREBF1-205ENST00000395757 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.72
SREBF1-205ENST00000395757 IGHV3-30-3P0DP02 117 aa10.52□□□□□ -0.73
SREBF1-205ENST00000395757 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.73
SREBF1-205ENST00000395757 LYRM7Q5U5X0 104 aa10.52□□□□□ -0.73
SREBF1-205ENST00000395757 TRBV7-3A0A075B6L6 115 aa10.52□□□□□ -0.73
SREBF1-205ENST00000395757 FAM19A4Q96LR4 140 aa10.52□□□□□ -0.73
SREBF1-205ENST00000395757 TIMM17AQ99595 171 aa10.52□□□□□ -0.73
SREBF1-205ENST00000395757 NBPF19A0A087WUL8 3843 aa10.51□□□□□ -0.73
SREBF1-205ENST00000395757 CFAP126Q5VTH2 177 aa10.51□□□□□ -0.73
SREBF1-205ENST00000395757 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
SREBF1-205ENST00000395757 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
SREBF1-205ENST00000395757 MAST4O15021 2626 aa10.51□□□□□ -0.73
SREBF1-205ENST00000395757 CDKN2A-AS1Q9UH64 79 aa10.51□□□□□ -0.73
SREBF1-205ENST00000395757 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
SREBF1-205ENST00000395757 RHOHQ15669 191 aa10.5□□□□□ -0.73
SREBF1-205ENST00000395757 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
SREBF1-205ENST00000395757 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
SREBF1-205ENST00000395757 J3KT08 172 aa10.48□□□□□ -0.73
SREBF1-205ENST00000395757 TMEM89A2RUT3 159 aa10.48□□□□□ -0.73
SREBF1-205ENST00000395757 Q9H8V8 135 aa10.48□□□□□ -0.73
SREBF1-205ENST00000395757 TAL2Q16559 108 aa10.48□□□□□ -0.73
SREBF1-205ENST00000395757 NDUFA11Q86Y39 141 aa10.48□□□□□ -0.73
SREBF1-205ENST00000395757 LINC01006Q8NI28 216 aa10.48□□□□□ -0.73
SREBF1-205ENST00000395757 CFC1BP0CG36 223 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 CFC1P0CG37 223 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 FHL3Q13643 280 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 TMEM126AQ9H061 195 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 PFN2P35080 140 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 NOTCH1P46531 2555 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 TCL1BO95988 128 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 LINC00482Q8N8I6 264 aa10.47□□□□□ -0.73
SREBF1-205ENST00000395757 C5orf38Q86SI9 138 aa10.46□□□□□ -0.73
SREBF1-205ENST00000395757 TMEM101Q96IK0 257 aa10.46□□□□□ -0.73
SREBF1-205ENST00000395757 A0A096LNT2 108 aa10.46□□□□□ -0.73
SREBF1-205ENST00000395757 F8WDY8 70 aa10.46□□□□□ -0.73
SREBF1-205ENST00000395757 J3QKU1 62 aa10.46□□□□□ -0.74
SREBF1-205ENST00000395757 LEPROTO15243 131 aa10.46□□□□□ -0.74
SREBF1-205ENST00000395757 CIRBPQ14011 172 aaKnown RBP10.46□□□□□ -0.74
SREBF1-205ENST00000395757 KLK9Q2XQG4 91 aa10.45□□□□□ -0.74
SREBF1-205ENST00000395757 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
SREBF1-205ENST00000395757 A0A0J9YXY3 114 aa10.45□□□□□ -0.74
SREBF1-205ENST00000395757 SLC25A29Q8N8R3 303 aa10.45□□□□□ -0.74
SREBF1-205ENST00000395757 A0A0U1RQV1 116 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 CRLF1O75462 422 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 C4orf26Q17RF5 130 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 CR1P17927 2039 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 LINC00158P58513 81 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 NBEAL1Q6ZS30 2694 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 COX6CP09669 75 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 C1orf158Q8N1D5 194 aa10.44□□□□□ -0.74
SREBF1-205ENST00000395757 TRBV6-5A0A0K0K1A5 114 aa10.43□□□□□ -0.74
SREBF1-205ENST00000395757 FAM236AA0A1B0GUQ0 79 aa10.43□□□□□ -0.74
SREBF1-205ENST00000395757 FAM236BA0A1B0GV22 79 aa10.43□□□□□ -0.74
SREBF1-205ENST00000395757 NXPH4O95158 308 aa10.43□□□□□ -0.74
SREBF1-205ENST00000395757 PPDPFLQ8WWR9 84 aa10.43□□□□□ -0.74
SREBF1-205ENST00000395757 LINC01546A6NGU7 62 aa10.43□□□□□ -0.74
SREBF1-205ENST00000395757 RNASE1P07998 156 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms