RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 POM121L12Q8N7R1 296 aa6.56□□□□□ -1.36
RTN4-206ENST00000394611 RNF152Q8N8N0 203 aa6.56□□□□□ -1.36
RTN4-206ENST00000394611 MINOS1-NBL1R4GNA1 71 aa6.56□□□□□ -1.36
RTN4-206ENST00000394611 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
RTN4-206ENST00000394611 C20orf203Q8NBC4 194 aa6.56□□□□□ -1.36
RTN4-206ENST00000394611 IGLV4-3A0A075B6K6 122 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 UBE2D3P61077 147 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 UBE2D2P62837 147 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 HERVK_113P63121 156 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 DSCR8Q96T75 97 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 TRAV23DV6A0A075B6W5 121 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 RPL36AP83881 106 aaKnown RBP6.55□□□□□ -1.36
RTN4-206ENST00000394611 RPL36ALQ969Q0 106 aaKnown RBP6.55□□□□□ -1.36
RTN4-206ENST00000394611 CCL19Q99731 98 aa6.55□□□□□ -1.36
RTN4-206ENST00000394611 IGLV10-54A0A075B6I4 117 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 LECT2O14960 151 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 C8orf31Q8N9H6 132 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 TRGV4A0A0C4DH28 118 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 SLURP1P55000 103 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 LAMTOR3Q9UHA4 124 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 KRTAP10-9P60411 292 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
RTN4-206ENST00000394611 VPS13CQ709C8 3753 aa6.54□□□□□ -1.36
RTN4-206ENST00000394611 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 LY6LH3BQJ8 138 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 C5orf56Q8N8D9 126 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 IGHV4-61A0A0C4DH41 118 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 NDUFA4O00483 81 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 NCR3O14931 201 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 XCL1P47992 114 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 STHQ8IWL8 128 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 PIFOQ8TCI5 191 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 MRPL53Q96EL3 112 aaKnown RBP6.53□□□□□ -1.36
RTN4-206ENST00000394611 PIMREGQ9BSJ6 248 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 PEMTQ9UBM1 199 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 EIF4EBP3O60516 100 aaPredicted RBP6.53□□□□□ -1.36
RTN4-206ENST00000394611 TRACP01848 142 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 S100A7L2Q5SY68 101 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 U3KQE9 123 aa6.53□□□□□ -1.36
RTN4-206ENST00000394611 IGIPA6NJ69 53 aa6.52□□□□□ -1.37
RTN4-206ENST00000394611 GPHB5Q86YW7 130 aa6.52□□□□□ -1.37
RTN4-206ENST00000394611 TIMM17AQ99595 171 aa6.52□□□□□ -1.37
RTN4-206ENST00000394611 IGHV1-69DA0A0B4J2H0 117 aa6.52□□□□□ -1.37
RTN4-206ENST00000394611 C10orf105Q8TEF2 133 aa6.52□□□□□ -1.37
RTN4-206ENST00000394611 MIR7-3HGQ8N6C7 128 aa6.52□□□□□ -1.37
RTN4-206ENST00000394611 M0QY20 66 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 ODF3Q96PU9 254 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 C1orf43Q9BWL3 253 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 CNFNQ9BYD5 112 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 APCP25054 2843 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 FAM223BA6NKX1 122 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 IGHV1-69P01742 117 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 SCXQ7RTU7 201 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 FAM223AQ8IWN6 122 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 DAD1P61803 113 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 TMEM190Q8WZ59 177 aa6.51□□□□□ -1.37
RTN4-206ENST00000394611 NHLRC4P0CG21 123 aaPredicted RBP6.5□□□□□ -1.37
RTN4-206ENST00000394611 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
RTN4-206ENST00000394611 NF1P21359 2839 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 POLR2KP53803 58 aaKnown RBP6.5□□□□□ -1.37
RTN4-206ENST00000394611 ZNF415Q09FC8 603 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 C20orf197Q8N268 126 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 MIAQ16674 131 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 C11orf71Q6IPW1 123 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 MRAPQ8TCY5 172 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
RTN4-206ENST00000394611 ITPR2Q14571 2701 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 UNC79Q9P2D8 2635 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 BAHCC1Q9P281 2608 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 IGHV4OR15-8A0A075B7B6 117 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 A0A087WW49 117 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 ATRQ13535 2644 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 A0A0B4J2C4 111 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 Q8N2B8 174 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 LINC00526Q96FQ7 95 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
RTN4-206ENST00000394611 RBMY1BA6NDE4 496 aaKnown RBP6.48□□□□□ -1.37
RTN4-206ENST00000394611 RBMY1EA6NEQ0 496 aaKnown RBP6.48□□□□□ -1.37
RTN4-206ENST00000394611 SOCS3O14543 225 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 RBMY1DP0C7P1 496 aaKnown RBP6.48□□□□□ -1.37
RTN4-206ENST00000394611 RBMY1A1P0DJD3 496 aaKnown RBP6.48□□□□□ -1.37
RTN4-206ENST00000394611 RBMY1CP0DJD4 496 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 ODF3BA8MYP8 253 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 TIRAPP58753 221 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 DEFB112Q30KQ8 113 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 C18orf65Q6ZTR6 163 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 TMEM61Q8N0U2 210 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 SIRPDQ9H106 197 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 DEFB4AO15263 64 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 USMG5Q96IX5 58 aa6.48□□□□□ -1.37
RTN4-206ENST00000394611 FLNBO75369 2602 aaKnown RBP6.48□□□□□ -1.37
RTN4-206ENST00000394611 H3BT86 120 aa6.47□□□□□ -1.37
RTN4-206ENST00000394611 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms