RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 APOMO95445 188 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 C16orf74Q96GX8 76 aa7.97□□□□□ -1.13
TCOF1-203ENST00000394269 GEMIN7Q9H840 131 aaKnown RBP7.97□□□□□ -1.13
TCOF1-203ENST00000394269 LINC00694P0DN24 101 aa7.96□□□□□ -1.13
TCOF1-203ENST00000394269 TGP01266 2768 aa7.96□□□□□ -1.14
TCOF1-203ENST00000394269 H3BRM9 83 aa7.96□□□□□ -1.14
TCOF1-203ENST00000394269 SPINK8P0C7L1 97 aa7.96□□□□□ -1.14
TCOF1-203ENST00000394269 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
TCOF1-203ENST00000394269 C9orf118A6NHY6 69 aa7.95□□□□□ -1.14
TCOF1-203ENST00000394269 PRSS2P07478 247 aa7.95□□□□□ -1.14
TCOF1-203ENST00000394269 ZNF22P17026 224 aaPredicted RBP7.95□□□□□ -1.14
TCOF1-203ENST00000394269 NPC2P61916 151 aa7.95□□□□□ -1.14
TCOF1-203ENST00000394269 SAMD5Q5TGI4 173 aa7.95□□□□□ -1.14
TCOF1-203ENST00000394269 CITED1Q99966 193 aa7.95□□□□□ -1.14
TCOF1-203ENST00000394269 UBE2D4Q9Y2X8 147 aa7.95□□□□□ -1.14
TCOF1-203ENST00000394269 TRAV4A0A0B4J268 109 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 A0A0U1RRA0 63 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 UBE2L6O14933 153 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 CSNK1G2-AS1Q8NCQ2 148 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 PLAC8L1A1L4L8 177 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 A4D1N5 150 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 OCIAD2Q56VL3 154 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 C9orf66Q5T8R8 295 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 MRAPQ8TCY5 172 aa7.94□□□□□ -1.14
TCOF1-203ENST00000394269 H7C2G1 150 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 HTN3P15516 51 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 ZNF625Q96I27 306 aaPredicted RBP7.93□□□□□ -1.14
TCOF1-203ENST00000394269 DNAJC30Q96LL9 226 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 GAGE6Q13070 117 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 C12orf74Q32Q52 190 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 PIK3CD-AS1Q5SR53 167 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 NTM-AS1Q6ZSK4 140 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 FABP2P12104 132 aa7.93□□□□□ -1.14
TCOF1-203ENST00000394269 DAZ2Q13117 558 aaKnown RBP7.93□□□□□ -1.14
TCOF1-203ENST00000394269 MTURNQ8N3F0 131 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 FAM104AQ969W3 186 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 CHCHD5Q9BSY4 110 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 A0A0J9YY99 117 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 DEFB121Q5J5C9 76 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 TM2D2Q9BX73 214 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
TCOF1-203ENST00000394269 IGHV3-30-3P0DP02 117 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 SPANXA1Q9NS26 97 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 TMEM262E9PQX1 116 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 PYGO1Q9Y3Y4 419 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 A0A1W2PPM0 123 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 GTF2H5Q6ZYL4 71 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 NFE4Q86UQ8 179 aa7.91□□□□□ -1.14
TCOF1-203ENST00000394269 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 OR5A1Q8NGJ0 315 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 IL17DQ8TAD2 202 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 PTH2Q96A98 100 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 FAM110AQ9BQ89 295 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 FAM222AQ5U5X8 452 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 AMELXQ99217 191 aa7.9□□□□□ -1.14
TCOF1-203ENST00000394269 UBE2D3P61077 147 aa7.9□□□□□ -1.15
TCOF1-203ENST00000394269 UBE2D2P62837 147 aa7.9□□□□□ -1.15
TCOF1-203ENST00000394269 COX6A2Q02221 97 aa7.9□□□□□ -1.15
TCOF1-203ENST00000394269 DAZ4Q86SG3 579 aaKnown RBP7.9□□□□□ -1.15
TCOF1-203ENST00000394269 DAND5Q8N907 189 aa7.9□□□□□ -1.15
TCOF1-203ENST00000394269 DAZ3Q9NR90 486 aaKnown RBP7.9□□□□□ -1.15
TCOF1-203ENST00000394269 PGPEP1Q9NXJ5 209 aa7.9□□□□□ -1.15
TCOF1-203ENST00000394269 TRBV10-1A0A0K0K1A3 114 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 LEPROTO15243 131 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 EDA2RQ9HAV5 297 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 GYPEP15421 78 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 INSL3P51460 131 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 FHL2Q14192 279 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
TCOF1-203ENST00000394269 CIDEAO60543 219 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 NDUFA12Q9UI09 145 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 IGLL5B9A064 214 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 MRPS36P82909 103 aaKnown RBP7.88□□□□□ -1.15
TCOF1-203ENST00000394269 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 MDFIQ99750 246 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 TAL2Q16559 108 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 CLPSL2Q6UWE3 100 aa7.88□□□□□ -1.15
TCOF1-203ENST00000394269 C10orf126Q8N4M7 172 aa7.87□□□□□ -1.15
TCOF1-203ENST00000394269 TOMM7Q9P0U1 55 aa7.87□□□□□ -1.15
TCOF1-203ENST00000394269 X6R8D5 127 aa7.87□□□□□ -1.15
TCOF1-203ENST00000394269 H3BMG7 143 aa7.87□□□□□ -1.15
TCOF1-203ENST00000394269 OVOL2Q9BRP0 275 aa7.87□□□□□ -1.15
TCOF1-203ENST00000394269 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 K7EP34 96 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 UBE2D1P51668 147 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 MUSTN1Q8IVN3 82 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 PRIMA1Q86XR5 153 aa7.86□□□□□ -1.15
TCOF1-203ENST00000394269 SCGB1C2P0DMR2 95 aa7.85□□□□□ -1.15
TCOF1-203ENST00000394269 RPL24P83731 157 aaKnown RBP7.85□□□□□ -1.15
TCOF1-203ENST00000394269 LINC00242Q5T6M2 205 aa7.85□□□□□ -1.15
TCOF1-203ENST00000394269 A0A0J9YXY3 114 aa7.85□□□□□ -1.15
TCOF1-203ENST00000394269 Q1RN00 199 aa7.85□□□□□ -1.15
TCOF1-203ENST00000394269 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms