RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 K7EQG2 157 aa12.22□□□□□ -0.45
SIPA1-201ENST00000394224 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.21□□□□□ -0.46
SIPA1-201ENST00000394224 IGLV1-40P01703 118 aa12.21□□□□□ -0.46
SIPA1-201ENST00000394224 LINC00694P0DN24 101 aa12.21□□□□□ -0.46
SIPA1-201ENST00000394224 PRIMA1Q86XR5 153 aa12.21□□□□□ -0.46
SIPA1-201ENST00000394224 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
SIPA1-201ENST00000394224 PSMB8P28062 276 aa12.2□□□□□ -0.46
SIPA1-201ENST00000394224 ATP6V0E2Q8NHE4 81 aa12.2□□□□□ -0.46
SIPA1-201ENST00000394224 NDUFV3P56181 108 aaKnown RBP12.2□□□□□ -0.46
SIPA1-201ENST00000394224 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
SIPA1-201ENST00000394224 Q8N2B8 174 aa12.19□□□□□ -0.46
SIPA1-201ENST00000394224 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
SIPA1-201ENST00000394224 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
SIPA1-201ENST00000394224 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
SIPA1-201ENST00000394224 IFITM1P13164 125 aa12.19□□□□□ -0.46
SIPA1-201ENST00000394224 WFDC10AQ9H1F0 79 aa12.19□□□□□ -0.46
SIPA1-201ENST00000394224 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
SIPA1-201ENST00000394224 IGHV1-58A0A0C4DH39 117 aa12.18□□□□□ -0.46
SIPA1-201ENST00000394224 B4DSR2 109 aa12.18□□□□□ -0.46
SIPA1-201ENST00000394224 LINC01619G3V211 115 aa12.18□□□□□ -0.46
SIPA1-201ENST00000394224 MED14OSP0DP75 135 aa12.18□□□□□ -0.46
SIPA1-201ENST00000394224 UCNP55089 124 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 GAGE6Q13070 117 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 RHOHQ15669 191 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 NSUN5P1Q3KNT7 163 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 PFN2P35080 140 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 VSIG2Q96IQ7 327 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 A0A096LPF7 62 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 RPL35AP18077 110 aaKnown RBP12.17□□□□□ -0.46
SIPA1-201ENST00000394224 CLPSL2Q6UWE3 100 aa12.17□□□□□ -0.46
SIPA1-201ENST00000394224 NHLRC4P0CG21 123 aaPredicted RBP12.16□□□□□ -0.46
SIPA1-201ENST00000394224 ODF3Q96PU9 254 aa12.16□□□□□ -0.46
SIPA1-201ENST00000394224 TRBV10-2A0A0K0K1G8 114 aa12.16□□□□□ -0.46
SIPA1-201ENST00000394224 LOC100131303A0A0U1RQF7 123 aa12.16□□□□□ -0.46
SIPA1-201ENST00000394224 TMEM101Q96IK0 257 aa12.16□□□□□ -0.46
SIPA1-201ENST00000394224 ITPR2Q14571 2701 aa12.15□□□□□ -0.46
SIPA1-201ENST00000394224 NBPF19A0A087WUL8 3843 aa12.15□□□□□ -0.46
SIPA1-201ENST00000394224 TRBV6-5A0A0K0K1A5 114 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 Q6ZTI0 123 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 A0A0B4J2C4 111 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 GAGE7O76087 117 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 GAGE12FP0CL80 117 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 GAGE12GP0CL81 117 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 GAGE12IP0CL82 117 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 FAM104AQ969W3 186 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 HECTD1Q9ULT8 2610 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 UBE2D4Q9Y2X8 147 aa12.14□□□□□ -0.47
SIPA1-201ENST00000394224 ATP5G1P05496 136 aa12.13□□□□□ -0.47
SIPA1-201ENST00000394224 LITAFQ99732 161 aa12.13□□□□□ -0.47
SIPA1-201ENST00000394224 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
SIPA1-201ENST00000394224 UBR5O95071 2799 aaPredicted RBP12.13□□□□□ -0.47
SIPA1-201ENST00000394224 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
SIPA1-201ENST00000394224 MIAQ16674 131 aa12.13□□□□□ -0.47
SIPA1-201ENST00000394224 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
SIPA1-201ENST00000394224 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
SIPA1-201ENST00000394224 TRGV2A0A075B6R0 118 aa12.12□□□□□ -0.47
SIPA1-201ENST00000394224 FAM236AA0A1B0GUQ0 79 aa12.12□□□□□ -0.47
SIPA1-201ENST00000394224 FAM236BA0A1B0GV22 79 aa12.12□□□□□ -0.47
SIPA1-201ENST00000394224 K7EMT4 169 aa12.11□□□□□ -0.47
SIPA1-201ENST00000394224 MRPS36P82909 103 aaKnown RBP12.1□□□□□ -0.47
SIPA1-201ENST00000394224 ZNF415Q09FC8 603 aa12.1□□□□□ -0.47
SIPA1-201ENST00000394224 LINC00158P58513 81 aa12.1□□□□□ -0.47
SIPA1-201ENST00000394224 STHQ8IWL8 128 aa12.1□□□□□ -0.47
SIPA1-201ENST00000394224 SLPIP03973 132 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 KRTAP10-9P60411 292 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 ESM1Q9NQ30 184 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 FASNP49327 2511 aaKnown RBP12.09□□□□□ -0.47
SIPA1-201ENST00000394224 UBE2L6O14933 153 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 SOSTDC1Q6X4U4 206 aa12.09□□□□□ -0.47
SIPA1-201ENST00000394224 VWFP04275 2813 aa12.08□□□□□ -0.48
SIPA1-201ENST00000394224 LINC00308Q8TCZ7 52 aa12.08□□□□□ -0.48
SIPA1-201ENST00000394224 CITED1Q99966 193 aa12.08□□□□□ -0.48
SIPA1-201ENST00000394224 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
SIPA1-201ENST00000394224 TRBV30A0A0K0K1B3 111 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 H3BUA1 57 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 DEFB130BP0DP73 79 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 DEFB130AP0DP74 79 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 DAZ2Q13117 558 aaKnown RBP12.07□□□□□ -0.48
SIPA1-201ENST00000394224 DAZ4Q86SG3 579 aaKnown RBP12.07□□□□□ -0.48
SIPA1-201ENST00000394224 SBSPONQ8IVN8 264 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 MAP6D1Q9H9H5 199 aa12.07□□□□□ -0.48
SIPA1-201ENST00000394224 DAZ3Q9NR90 486 aaKnown RBP12.07□□□□□ -0.48
SIPA1-201ENST00000394224 TRBV7-9A0A0J9YWB2 115 aa12.06□□□□□ -0.48
SIPA1-201ENST00000394224 BAALC-AS2P0C853 105 aa12.06□□□□□ -0.48
SIPA1-201ENST00000394224 HERV-K104P63124 156 aa12.06□□□□□ -0.48
SIPA1-201ENST00000394224 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
SIPA1-201ENST00000394224 MRPL23Q16540 153 aaKnown RBP12.05□□□□□ -0.48
SIPA1-201ENST00000394224 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
SIPA1-201ENST00000394224 ATRQ13535 2644 aa12.05□□□□□ -0.48
SIPA1-201ENST00000394224 IGKV3D-7A0A0C4DH55 119 aa12.05□□□□□ -0.48
SIPA1-201ENST00000394224 RPL32P62910 135 aaKnown RBP12.05□□□□□ -0.48
SIPA1-201ENST00000394224 FAM218AQ96MZ4 157 aa12.05□□□□□ -0.48
SIPA1-201ENST00000394224 VPREB3Q9UKI3 123 aa12.05□□□□□ -0.48
SIPA1-201ENST00000394224 PDZD2O15018 2839 aa12.04□□□□□ -0.48
SIPA1-201ENST00000394224 LST1O00453 97 aa12.04□□□□□ -0.48
SIPA1-201ENST00000394224 INSP01308 110 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms