RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 KIAA0087Q14695 138 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 CD164L2Q6UWJ8 174 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 LINC01006Q8NI28 216 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 SDK1Q7Z5N4 2213 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 C4orf3Q8WVX3 66 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 PSMG3-AS1Q96PY0 264 aa2.34□□□□□ -2.03
PHF3-202ENST00000393387 KPRPQ5T749 579 aaPredicted RBP2.34□□□□□ -2.04
PHF3-202ENST00000393387 FAM218AQ96MZ4 157 aa2.34□□□□□ -2.04
PHF3-202ENST00000393387 LUZP6Q538Z0 58 aa2.34□□□□□ -2.04
PHF3-202ENST00000393387 C1orf229Q6ZS94 237 aaPredicted RBP2.34□□□□□ -2.04
PHF3-202ENST00000393387 MCM3APO60318 1980 aa2.34□□□□□ -2.04
PHF3-202ENST00000393387 SMCHD1A6NHR9 2005 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 EIF4EBP1Q13541 118 aaPredicted RBP2.33□□□□□ -2.04
PHF3-202ENST00000393387 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 SMIM1B2RUZ4 78 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 NHSQ6T4R5 1651 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 TAF1LQ8IZX4 1826 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 LOC101927531A0A1B0GV80 90 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 KIAA1217Q5T5P2 1943 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
PHF3-202ENST00000393387 UQCR11O14957 56 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 ADORA2A-AS1P86434 159 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 LINC00242Q5T6M2 205 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 IGLV4-60A0A075B6I1 120 aa2.33□□□□□ -2.04
PHF3-202ENST00000393387 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 COX17Q14061 63 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 PIP4P1Q86T03 277 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 MARF1Q9Y4F3 1742 aaKnown RBP2.32□□□□□ -2.04
PHF3-202ENST00000393387 DOCK5Q9H7D0 1870 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 NYNRINQ9P2P1 1898 aaKnown RBP2.32□□□□□ -2.04
PHF3-202ENST00000393387 ADAMTSL1Q8N6G6 1762 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 LY6G6CO95867 125 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 PRR15Q8IV56 129 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 Q8IZM0 81 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 C22orf24Q9Y442 160 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 MYO7AQ13402 2215 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 URB1O60287 2271 aaKnown RBP2.32□□□□□ -2.04
PHF3-202ENST00000393387 C18orf65Q6ZTR6 163 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 LINC00337Q8N6G1 96 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 Q8N7P7 452 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 CDC42SE2Q9NRR3 84 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 TDRD15B5MCY1 1934 aaKnown RBP2.32□□□□□ -2.04
PHF3-202ENST00000393387 YLPM1P49750 1951 aaKnown RBP2.32□□□□□ -2.04
PHF3-202ENST00000393387 IGIPA6NJ69 53 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 Q8N2B8 174 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 PTPRDP23468 1912 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 TRIP12Q14669 1992 aaPredicted RBP2.32□□□□□ -2.04
PHF3-202ENST00000393387 CACNA1DQ01668 2161 aa2.32□□□□□ -2.04
PHF3-202ENST00000393387 DLEC1Q9Y238 1755 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 FBXL19-AS1Q494R0 122 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 LYPD5Q6UWN5 251 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 ITGB4P16144 1822 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 IGLV3-1P01715 115 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 FHL3Q13643 280 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 Q6ZQT0 140 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 STRCP1A6NGW2 1772 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 STRCQ7RTU9 1775 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 ARHGEF17Q96PE2 2063 aaPredicted RBP2.31□□□□□ -2.04
PHF3-202ENST00000393387 NRAPQ86VF7 1730 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 EPM2AB3EWF7 344 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 PARP14Q460N5 1801 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 ZNF575Q86XF7 245 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 CYP4F30PQ9H0H9 118 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 BRCA1P38398 1863 aaKnown RBP2.31□□□□□ -2.04
PHF3-202ENST00000393387 TRPM7Q96QT4 1865 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 PLA2G2CQ5R387 149 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 DSCAML1Q8TD84 2053 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 NUP98P52948 1817 aa2.31□□□□□ -2.04
PHF3-202ENST00000393387 BRWD1-AS2P59051 145 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 MOBPQ13875 183 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 GREB1LQ9C091 1923 aaPredicted RBP2.3□□□□□ -2.04
PHF3-202ENST00000393387 TRPM6Q9BX84 2022 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 CSAG1Q6PB30 78 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 PRO0461Q9UI25 63 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 LCE2AQ5TA79 106 aaPredicted RBP2.3□□□□□ -2.04
PHF3-202ENST00000393387 ST20-AS1Q8NBB2 130 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 K7EQZ3 153 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 IGLV1-44P01699 117 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 Q6ZSN1 163 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 DYSFO75923 2080 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 CHTF8P0CG12 524 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 POLR2KP53803 58 aaKnown RBP2.3□□□□□ -2.04
PHF3-202ENST00000393387 Q96NJ1 140 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 ARFGEF3Q5TH69 2177 aa2.3□□□□□ -2.04
PHF3-202ENST00000393387 BCORQ6W2J9 1755 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 A0A096LNJ9 63 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 LINC00313P59037 77 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 Q6ZPA2 131 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 Q6ZRU5 148 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 NCOR1O75376 2440 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 KIAA0100Q14667 2235 aaKnown RBP2.29□□□□□ -2.04
PHF3-202ENST00000393387 HEATR1Q9H583 2144 aaKnown RBP2.29□□□□□ -2.04
PHF3-202ENST00000393387 ATG2BQ96BY7 2078 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 C11orf72Q8NBR9 251 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 C8orf17Q9NRJ1 99 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 PATJQ8NI35 1801 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 IGLV5-52A0A0A0MRZ9 124 aa2.29□□□□□ -2.04
PHF3-202ENST00000393387 IGFL2Q6UWQ7 119 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms