RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
PDCD4-202ENST00000393104 A8MTW9 85 aa8.22□□□□□ -1.09
PDCD4-202ENST00000393104 LINC00467Q9BRT7 94 aa8.22□□□□□ -1.09
PDCD4-202ENST00000393104 IGHV3-73A0A0B4J1V6 119 aa8.21□□□□□ -1.09
PDCD4-202ENST00000393104 TMEM89A2RUT3 159 aa8.21□□□□□ -1.09
PDCD4-202ENST00000393104 C3orf56Q8N813 242 aa8.21□□□□□ -1.09
PDCD4-202ENST00000393104 TMEM101Q96IK0 257 aa8.21□□□□□ -1.09
PDCD4-202ENST00000393104 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
PDCD4-202ENST00000393104 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
PDCD4-202ENST00000393104 C9orf129Q5T035 196 aaKnown RBP8.21□□□□□ -1.1
PDCD4-202ENST00000393104 SMIM20Q8N5G0 67 aa8.21□□□□□ -1.1
PDCD4-202ENST00000393104 TMEM86BQ8N661 226 aa8.21□□□□□ -1.1
PDCD4-202ENST00000393104 CDKN2A-AS1Q9UH64 79 aa8.21□□□□□ -1.1
PDCD4-202ENST00000393104 IGLV5-39A0A0G2JS06 123 aa8.21□□□□□ -1.1
PDCD4-202ENST00000393104 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
PDCD4-202ENST00000393104 CD28P10747 220 aa8.2□□□□□ -1.1
PDCD4-202ENST00000393104 USP9XQ93008 2570 aaPredicted RBP8.2□□□□□ -1.1
PDCD4-202ENST00000393104 H3BUX3 64 aa8.2□□□□□ -1.1
PDCD4-202ENST00000393104 Q96MF0 132 aa8.2□□□□□ -1.1
PDCD4-202ENST00000393104 TIMM17BO60830 172 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 CENPEQ02224 2701 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.19□□□□□ -1.1
PDCD4-202ENST00000393104 IGHV3OR16-12A0A075B7B8 117 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 IGKV2-29A2NJV5 120 aaPredicted RBP8.19□□□□□ -1.1
PDCD4-202ENST00000393104 NDUFA7O95182 113 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 PF4V1P10720 104 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 C11orf72Q8NBR9 251 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 TEX15Q9BXT5 2789 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 Q6YL49 198 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 ZNF462Q96JM2 2506 aa8.19□□□□□ -1.1
PDCD4-202ENST00000393104 NDUFA1O15239 70 aa8.18□□□□□ -1.1
PDCD4-202ENST00000393104 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
PDCD4-202ENST00000393104 PRSS2P07478 247 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 Q1RN00 199 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 MEIG1Q5JSS6 88 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 FAM19A3Q7Z5A8 133 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 LINC00308Q8TCZ7 52 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 KNCNA6PVL3 124 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 F5H768 121 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 LINC00694P0DN24 101 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
PDCD4-202ENST00000393104 TNFRSF18Q9Y5U5 241 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
PDCD4-202ENST00000393104 KRTAP1-1Q07627 177 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
PDCD4-202ENST00000393104 LINC00242Q5T6M2 205 aa8.16□□□□□ -1.1
PDCD4-202ENST00000393104 C5orf38Q86SI9 138 aa8.16□□□□□ -1.1
PDCD4-202ENST00000393104 PPDPFQ9H3Y8 114 aa8.16□□□□□ -1.1
PDCD4-202ENST00000393104 DUX5Q96PT3 197 aa8.15□□□□□ -1.1
PDCD4-202ENST00000393104 DEFB112Q30KQ8 113 aa8.15□□□□□ -1.11
PDCD4-202ENST00000393104 VPREB3Q9UKI3 123 aa8.15□□□□□ -1.11
PDCD4-202ENST00000393104 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
PDCD4-202ENST00000393104 SMIM1B2RUZ4 78 aa8.14□□□□□ -1.11
PDCD4-202ENST00000393104 TIRAPP58753 221 aa8.14□□□□□ -1.11
PDCD4-202ENST00000393104 NTM-AS1Q6ZSK4 140 aa8.14□□□□□ -1.11
PDCD4-202ENST00000393104 ID1P41134 155 aa8.14□□□□□ -1.11
PDCD4-202ENST00000393104 C18orf65Q6ZTR6 163 aa8.14□□□□□ -1.11
PDCD4-202ENST00000393104 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
PDCD4-202ENST00000393104 COX7A2LO14548 114 aa8.13□□□□□ -1.11
PDCD4-202ENST00000393104 KLK5Q9Y337 293 aaPredicted RBP8.13□□□□□ -1.11
PDCD4-202ENST00000393104 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
PDCD4-202ENST00000393104 FAM236AA0A1B0GUQ0 79 aa8.12□□□□□ -1.11
PDCD4-202ENST00000393104 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
PDCD4-202ENST00000393104 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
PDCD4-202ENST00000393104 DAZ2Q13117 558 aaKnown RBP8.12□□□□□ -1.11
PDCD4-202ENST00000393104 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
PDCD4-202ENST00000393104 IL17DQ8TAD2 202 aa8.12□□□□□ -1.11
PDCD4-202ENST00000393104 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
PDCD4-202ENST00000393104 WFDC11Q8NEX6 87 aa8.12□□□□□ -1.11
PDCD4-202ENST00000393104 IGHV3-53P01767 116 aa8.11□□□□□ -1.11
PDCD4-202ENST00000393104 SYNJ2BPP57105 145 aa8.11□□□□□ -1.11
PDCD4-202ENST00000393104 IMUPQ9GZP8 106 aa8.11□□□□□ -1.11
PDCD4-202ENST00000393104 SPG11Q96JI7 2443 aa8.11□□□□□ -1.11
PDCD4-202ENST00000393104 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
PDCD4-202ENST00000393104 Q9H8V8 135 aa8.1□□□□□ -1.11
PDCD4-202ENST00000393104 IGHV4-59P01825 116 aa8.1□□□□□ -1.11
PDCD4-202ENST00000393104 SS18Q15532 418 aa8.1□□□□□ -1.11
PDCD4-202ENST00000393104 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
PDCD4-202ENST00000393104 CFAP161Q6P656 301 aa8.1□□□□□ -1.11
PDCD4-202ENST00000393104 ZNF702PQ9H963 129 aa8.09□□□□□ -1.11
PDCD4-202ENST00000393104 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
PDCD4-202ENST00000393104 FAM208BQ5VWN6 2430 aa8.08□□□□□ -1.12
PDCD4-202ENST00000393104 LOC107984640A0A0U1RRK4 108 aa8.08□□□□□ -1.12
PDCD4-202ENST00000393104 HIST2H2BDQ6DRA6 164 aa8.08□□□□□ -1.12
PDCD4-202ENST00000393104 TENM4Q6N022 2769 aa8.08□□□□□ -1.12
PDCD4-202ENST00000393104 SNRPD3P62318 126 aaKnown RBP8.08□□□□□ -1.12
PDCD4-202ENST00000393104 HIST2H2BCQ6DN03 193 aa8.08□□□□□ -1.12
PDCD4-202ENST00000393104 RS1O15537 224 aa8.08□□□□□ -1.12
PDCD4-202ENST00000393104 HOXD3P31249 432 aaPredicted RBP8.08□□□□□ -1.12
PDCD4-202ENST00000393104 A0A0U1RRA0 63 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 USP9YO00507 2555 aaPredicted RBP8.07□□□□□ -1.12
PDCD4-202ENST00000393104 APCP25054 2843 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 TRACP01848 142 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 HTN1P15515 57 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 PDZD2O15018 2839 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 OXTP01178 125 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 C3orf22Q8N5N4 141 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 LINC00526Q96FQ7 95 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 UPK3BQ9BT76 320 aa8.07□□□□□ -1.12
PDCD4-202ENST00000393104 YAE1D1Q9NRH1 226 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms