RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 C10orf113Q5VZT2 155 aa-3.86□□□□□ -3.03
TRAJ53-201ENST00000390485 NUP35Q8NFH5 326 aa-3.86□□□□□ -3.03
TRAJ53-201ENST00000390485 ATP6V0E2Q8NHE4 81 aa-3.86□□□□□ -3.03
TRAJ53-201ENST00000390485 LINC00312Q9Y6C7 94 aa-3.86□□□□□ -3.03
TRAJ53-201ENST00000390485 NWD2Q9ULI1 1742 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 TRAV13-1A0A0B4J241 112 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 NDUFC2O95298 119 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 APOA2P02652 100 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 CCDC172P0C7W6 258 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 BAGE2Q86Y30 109 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 TMEM263Q8WUH6 116 aaKnown RBP-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 BTF3L4Q96K17 158 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 PAIP2Q9BPZ3 127 aaKnown RBP-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 C7orf50Q9BRJ6 194 aaKnown RBP-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 RPRMQ9NS64 109 aa-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 NOP16Q9Y3C1 178 aaKnown RBP-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 RIMS1Q86UR5 1692 aaKnown RBP-3.87□□□□□ -3.03
TRAJ53-201ENST00000390485 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 IQCF5A8MTL0 148 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 H3BMG7 143 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 SDC2P34741 201 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 PRLHP81277 87 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 DCUN1D2Q6PH85 259 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 LINC00305Q7Z4B0 112 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 SLC35B3Q9H1N7 401 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 V9GYH0 126 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 CCDC144AA2RUR9 1427 aa-3.88□□□□□ -3.03
TRAJ53-201ENST00000390485 IFNA17P01571 189 aa-3.89□□□□□ -3.03
TRAJ53-201ENST00000390485 APOC3P02656 99 aa-3.89□□□□□ -3.03
TRAJ53-201ENST00000390485 S100A6P06703 90 aa-3.89□□□□□ -3.03
TRAJ53-201ENST00000390485 TPPP2P59282 170 aa-3.89□□□□□ -3.03
TRAJ53-201ENST00000390485 TMEM97Q5BJF2 176 aa-3.89□□□□□ -3.03
TRAJ53-201ENST00000390485 KIAA1551Q9HCM1 1747 aa-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 UQCRQO14949 82 aa-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 CST2P09228 141 aa-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 HSPE1P61604 102 aaKnown RBP-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 B2MP61769 119 aa-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 Q6ZUT4 128 aa-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 XRN1Q8IZH2 1706 aaKnown RBP-3.9□□□□□ -3.03
TRAJ53-201ENST00000390485 TRPC5OSA6NMA1 111 aa-3.91□□□□□ -3.04
TRAJ53-201ENST00000390485 TMEM114B3SHH9 223 aa-3.91□□□□□ -3.04
TRAJ53-201ENST00000390485 GABARAPH6UMI1 98 aa-3.91□□□□□ -3.04
TRAJ53-201ENST00000390485 LINC01600Q96MT4 127 aa-3.91□□□□□ -3.04
TRAJ53-201ENST00000390485 GUCA1BQ9UMX6 200 aa-3.91□□□□□ -3.04
TRAJ53-201ENST00000390485 RGPD2P0DJD1 1756 aa-3.91□□□□□ -3.04
TRAJ53-201ENST00000390485 TRBV7-6A0A0J9YX20 115 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 TRDV1A0A1B0GX56 115 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 J3QLW9 94 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 HSD11B1P28845 292 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 LINC01545Q5VT33 79 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 LENEPQ9Y5L5 61 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 ANKRD36A6QL64 1941 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 SPEGQ15772 3267 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 MBD5Q9P267 1494 aa-3.92□□□□□ -3.04
TRAJ53-201ENST00000390485 LOC100506127A0A0U1RQW1 187 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 H7C1C5 153 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 DEXIO95424 95 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 SLC25A5P05141 298 aaKnown RBP-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 HIST1H1BP16401 226 aaKnown RBP-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 LCN6P62502 163 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 GNG5P63218 68 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 CCDC122Q5T0U0 273 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 CROCCP2Q86T23 111 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 GINS3Q9BRX5 216 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 LINC01558Q9Y6Z2 57 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 CFAP54Q96N23 3096 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 KDM5CP41229 1560 aa-3.93□□□□□ -3.04
TRAJ53-201ENST00000390485 CSN2P05814 226 aa-3.94□□□□□ -3.04
TRAJ53-201ENST00000390485 MGPP08493 103 aa-3.94□□□□□ -3.04
TRAJ53-201ENST00000390485 CHMP5Q9NZZ3 219 aa-3.94□□□□□ -3.04
TRAJ53-201ENST00000390485 PRNDQ9UKY0 176 aa-3.94□□□□□ -3.04
TRAJ53-201ENST00000390485 MAP3K5Q99683 1374 aa-3.94□□□□□ -3.04
TRAJ53-201ENST00000390485 DMDP11532 3685 aa-3.94□□□□□ -3.04
TRAJ53-201ENST00000390485 HCG22E2RYF7 251 aa-3.95□□□□□ -3.04
TRAJ53-201ENST00000390485 USE1Q9NZ43 259 aa-3.95□□□□□ -3.04
TRAJ53-201ENST00000390485 C4AP0C0L4 1744 aa-3.95□□□□□ -3.04
TRAJ53-201ENST00000390485 C4BP0C0L5 1744 aa-3.95□□□□□ -3.04
TRAJ53-201ENST00000390485 SMG6Q86US8 1419 aaKnown RBP-3.95□□□□□ -3.04
TRAJ53-201ENST00000390485 FYCO1Q9BQS8 1478 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 BORCS7-ASMTA0A0B4J1R7 106 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 G3V2T6 193 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 CCL8P80075 99 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 FDCSPQ8NFU4 85 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 NMNAT1Q9HAN9 279 aaPredicted RBP-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 CBLN4Q9NTU7 201 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 CLIP1P30622 1438 aa-3.96□□□□□ -3.04
TRAJ53-201ENST00000390485 M0QZK8 103 aa-3.97□□□□□ -3.04
TRAJ53-201ENST00000390485 UBE2G1P62253 170 aa-3.97□□□□□ -3.04
TRAJ53-201ENST00000390485 LTC4SQ16873 150 aa-3.97□□□□□ -3.04
TRAJ53-201ENST00000390485 SPANXN1Q5VSR9 72 aa-3.97□□□□□ -3.04
TRAJ53-201ENST00000390485 FAM167A-AS1Q96KT0 104 aa-3.97□□□□□ -3.04
TRAJ53-201ENST00000390485 SSR3Q9UNL2 185 aa-3.97□□□□□ -3.04
TRAJ53-201ENST00000390485 PPIP5K1Q6PFW1 1433 aa-3.97□□□□□ -3.05
TRAJ53-201ENST00000390485 MYH3P11055 1940 aa-3.97□□□□□ -3.05
TRAJ53-201ENST00000390485 IGLC7A0M8Q6 106 aa-3.98□□□□□ -3.05
TRAJ53-201ENST00000390485 RPL22P35268 128 aaKnown RBP-3.98□□□□□ -3.05
TRAJ53-201ENST00000390485 PPP1R2P41236 205 aa-3.98□□□□□ -3.05
TRAJ53-201ENST00000390485 RPL7L1Q6DKI1 246 aaKnown RBP-3.98□□□□□ -3.05
TRAJ53-201ENST00000390485 SH3BGRL3Q9H299 93 aa-3.98□□□□□ -3.05
TRAJ53-201ENST00000390485 AGPAT3Q9NRZ7 376 aa-3.98□□□□□ -3.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms