RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 TEX48A0A1B0GUV7 120 aa10.76□□□□□ -0.69
PSME4-201ENST00000389993 MED14OSP0DP75 135 aa10.76□□□□□ -0.69
PSME4-201ENST00000389993 PRSS47A8MTI9 375 aa10.75□□□□□ -0.69
PSME4-201ENST00000389993 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
PSME4-201ENST00000389993 M0QY20 66 aa10.75□□□□□ -0.69
PSME4-201ENST00000389993 NDUFA7O95182 113 aa10.75□□□□□ -0.69
PSME4-201ENST00000389993 ABCA12Q86UK0 2595 aa10.75□□□□□ -0.69
PSME4-201ENST00000389993 POLQO75417 2590 aa10.75□□□□□ -0.69
PSME4-201ENST00000389993 REG3AQ06141 175 aa10.74□□□□□ -0.69
PSME4-201ENST00000389993 PIK3CD-AS1Q5SR53 167 aa10.74□□□□□ -0.69
PSME4-201ENST00000389993 PTPRBP23467 1997 aa10.74□□□□□ -0.69
PSME4-201ENST00000389993 IGHV1-58A0A0C4DH39 117 aa10.74□□□□□ -0.69
PSME4-201ENST00000389993 ZFYVE26Q68DK2 2539 aa10.74□□□□□ -0.69
PSME4-201ENST00000389993 EYSQ5T1H1 3165 aa10.74□□□□□ -0.69
PSME4-201ENST00000389993 CRYBA4P53673 196 aa10.73□□□□□ -0.69
PSME4-201ENST00000389993 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
PSME4-201ENST00000389993 HERV-K104P63124 156 aa10.73□□□□□ -0.69
PSME4-201ENST00000389993 IGLV4-3A0A075B6K6 122 aa10.73□□□□□ -0.69
PSME4-201ENST00000389993 IGKV3D-7A0A0C4DH55 119 aa10.72□□□□□ -0.69
PSME4-201ENST00000389993 INSL3P51460 131 aa10.72□□□□□ -0.69
PSME4-201ENST00000389993 CLUHP3Q96NS8 147 aa10.72□□□□□ -0.69
PSME4-201ENST00000389993 WDFY4Q6ZS81 3184 aa10.72□□□□□ -0.69
PSME4-201ENST00000389993 XAGE1AQ9HD64 81 aa10.71□□□□□ -0.69
PSME4-201ENST00000389993 A0A096LNI7 61 aa10.71□□□□□ -0.69
PSME4-201ENST00000389993 SLPIP03973 132 aa10.71□□□□□ -0.69
PSME4-201ENST00000389993 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
PSME4-201ENST00000389993 CHCHD10Q8WYQ3 142 aaPredicted RBP10.71□□□□□ -0.69
PSME4-201ENST00000389993 ORMDL1Q9P0S3 153 aa10.71□□□□□ -0.69
PSME4-201ENST00000389993 NDUFA1O15239 70 aa10.71□□□□□ -0.7
PSME4-201ENST00000389993 CRIP2P52943 208 aaPredicted RBP10.71□□□□□ -0.7
PSME4-201ENST00000389993 NANOS2P60321 138 aaKnown RBP10.71□□□□□ -0.7
PSME4-201ENST00000389993 TRBV10-1A0A0K0K1A3 114 aa10.7□□□□□ -0.7
PSME4-201ENST00000389993 SPEGQ15772 3267 aa10.7□□□□□ -0.7
PSME4-201ENST00000389993 BRI3O95415 125 aa10.7□□□□□ -0.7
PSME4-201ENST00000389993 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
PSME4-201ENST00000389993 USP9XQ93008 2570 aaPredicted RBP10.7□□□□□ -0.7
PSME4-201ENST00000389993 HILS1P60008 231 aa10.7□□□□□ -0.7
PSME4-201ENST00000389993 NRACQ8N912 160 aa10.7□□□□□ -0.7
PSME4-201ENST00000389993 CRYGDP07320 174 aa10.69□□□□□ -0.7
PSME4-201ENST00000389993 ZNF462Q96JM2 2506 aa10.69□□□□□ -0.7
PSME4-201ENST00000389993 NDUFS5O43920 106 aa10.69□□□□□ -0.7
PSME4-201ENST00000389993 ANKRD29Q8N6D5 301 aa10.69□□□□□ -0.7
PSME4-201ENST00000389993 UBL5Q9BZL1 73 aa10.68□□□□□ -0.7
PSME4-201ENST00000389993 FN1P02751 2386 aaKnown RBP10.68□□□□□ -0.7
PSME4-201ENST00000389993 MRGPRG-AS1Q2M3A8 158 aa10.68□□□□□ -0.7
PSME4-201ENST00000389993 MRPS12O15235 138 aaKnown RBP10.68□□□□□ -0.7
PSME4-201ENST00000389993 TRACP01848 142 aa10.67□□□□□ -0.7
PSME4-201ENST00000389993 RNASE8Q8TDE3 154 aaKnown RBP10.67□□□□□ -0.7
PSME4-201ENST00000389993 LAMA1P25391 3075 aa10.67□□□□□ -0.7
PSME4-201ENST00000389993 LRCOL1A6NCL2 159 aa10.67□□□□□ -0.7
PSME4-201ENST00000389993 TSHBP01222 138 aa10.67□□□□□ -0.7
PSME4-201ENST00000389993 ZNF22P17026 224 aaPredicted RBP10.67□□□□□ -0.7
PSME4-201ENST00000389993 A0A0J9YWU9 116 aa10.67□□□□□ -0.7
PSME4-201ENST00000389993 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
PSME4-201ENST00000389993 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
PSME4-201ENST00000389993 ODF3L2Q3SX64 289 aa10.66□□□□□ -0.7
PSME4-201ENST00000389993 TCL1BO95988 128 aa10.65□□□□□ -0.7
PSME4-201ENST00000389993 RBMY1FQ15415 496 aaKnown RBP10.65□□□□□ -0.7
PSME4-201ENST00000389993 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
PSME4-201ENST00000389993 USP9YO00507 2555 aaPredicted RBP10.65□□□□□ -0.7
PSME4-201ENST00000389993 IGHV4-30-4P0DP06 118 aa10.65□□□□□ -0.7
PSME4-201ENST00000389993 COL27A1Q8IZC6 1860 aaPredicted RBP10.65□□□□□ -0.71
PSME4-201ENST00000389993 UBE2AP49459 152 aa10.64□□□□□ -0.71
PSME4-201ENST00000389993 KLLNB2CW77 178 aa10.64□□□□□ -0.71
PSME4-201ENST00000389993 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
PSME4-201ENST00000389993 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
PSME4-201ENST00000389993 LRRK2Q5S007 2527 aa10.64□□□□□ -0.71
PSME4-201ENST00000389993 C9orf153Q5TBE3 101 aa10.63□□□□□ -0.71
PSME4-201ENST00000389993 U3KQK5 164 aa10.63□□□□□ -0.71
PSME4-201ENST00000389993 AGRNO00468 2067 aa10.63□□□□□ -0.71
PSME4-201ENST00000389993 FAM19A5Q7Z5A7 132 aaPredicted RBP10.63□□□□□ -0.71
PSME4-201ENST00000389993 TM2D2Q9BX73 214 aa10.62□□□□□ -0.71
PSME4-201ENST00000389993 SPTBN5Q9NRC6 3674 aaKnown RBP10.62□□□□□ -0.71
PSME4-201ENST00000389993 MIAQ16674 131 aa10.62□□□□□ -0.71
PSME4-201ENST00000389993 C14orf132Q9NPU4 83 aa10.62□□□□□ -0.71
PSME4-201ENST00000389993 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
PSME4-201ENST00000389993 VPS13AQ96RL7 3174 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 LINC00310P59036 64 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 KPRPQ5T749 579 aaPredicted RBP10.61□□□□□ -0.71
PSME4-201ENST00000389993 SHISA2Q6UWI4 295 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 LYRM9A8MSI8 78 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 FOXI1Q12951 378 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 Q6ZSN1 163 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 IFITM1P13164 125 aa10.61□□□□□ -0.71
PSME4-201ENST00000389993 IGKV2-28A0A075B6P5 120 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 IGKV2D-28P01615 120 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 RBX1P62877 108 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 HIGD1BQ9P298 99 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 HIGD2AQ9BW72 106 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 TRANK1O15050 2925 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 ZNF580Q9UK33 172 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 MYO15AQ9UKN7 3530 aa10.6□□□□□ -0.71
PSME4-201ENST00000389993 C9orf85Q96MD7 179 aa10.59□□□□□ -0.71
PSME4-201ENST00000389993 UBE2D4Q9Y2X8 147 aa10.58□□□□□ -0.72
PSME4-201ENST00000389993 DIRC1Q969H9 104 aa10.57□□□□□ -0.72
PSME4-201ENST00000389993 RNF183Q96D59 192 aa10.57□□□□□ -0.72
PSME4-201ENST00000389993 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
PSME4-201ENST00000389993 MIFP14174 115 aa10.57□□□□□ -0.72
PSME4-201ENST00000389993 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms