RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 Q8N976 141 aa4.4□□□□□ -1.7
RFX3-204ENST00000382004 DHRS4-AS1Q9P1J3 65 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 THSD7AQ9UPZ6 1657 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 PLXNA2O75051 1894 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 TMEM131Q92545 1883 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 TRBV6-8A0A0A6YYG3 113 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 CCDC179H3BU77 68 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 H7C423 109 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 IGF2-ASQ6U949 168 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 LINC00322Q6ZN03 302 aaPredicted RBP4.4□□□□□ -1.71
RFX3-204ENST00000382004 OTOGLQ3ZCN5 2332 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 TMEM89A2RUT3 159 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 EBI3Q14213 229 aa4.4□□□□□ -1.71
RFX3-204ENST00000382004 ZNF22P17026 224 aaPredicted RBP4.39□□□□□ -1.71
RFX3-204ENST00000382004 PROK1P58294 105 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 ADORA2A-AS1P86434 159 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 PLA2G2EQ9NZK7 142 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 SIPA1L1O43166 1804 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 MGAMO43451 1857 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 C19orf71A6NCJ1 209 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 SMIM9A6NGZ8 99 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 A8MZ25 164 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 EML5Q05BV3 1969 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 M0R378 163 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 LINC00694P0DN24 101 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 TRBV30A0A0K0K1B3 111 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 ODF3L1Q8IXM7 274 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 MAPKAPK5-AS1Q8N8E1 139 aa4.39□□□□□ -1.71
RFX3-204ENST00000382004 LINC00208Q96KT6 92 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 TECTAO75443 2155 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 BBC3Q96PG8 261 aaPredicted RBP4.38□□□□□ -1.71
RFX3-204ENST00000382004 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 PLA2G2CQ5R387 149 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 SMIM11BQ8TCY0 68 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 DENND4CQ5VZ89 1909 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 PSPHP1O15172 72 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 COX7CP15954 63 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 AGRNO00468 2067 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 IGF1P05019 195 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 LINC01548A6NM66 108 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 BEAN1Q3B7T3 259 aa4.38□□□□□ -1.71
RFX3-204ENST00000382004 SMIM26A0A096LP01 95 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 TRAV10A0A0B4J240 114 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 LOC107984640A0A0U1RRK4 108 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 FAM208BQ5VWN6 2430 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 INAFM1C9JVW0 142 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 IGLV4-69A0A075B6H9 119 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 DEFB114Q30KQ6 69 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 DAZAP2Q15038 168 aaPredicted RBP4.37□□□□□ -1.71
RFX3-204ENST00000382004 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
RFX3-204ENST00000382004 PIP4P1Q86T03 277 aa4.37□□□□□ -1.71
RFX3-204ENST00000382004 KPRPQ5T749 579 aaPredicted RBP4.37□□□□□ -1.71
RFX3-204ENST00000382004 A0A1B0GXF2 115 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 TET2Q6N021 2002 aaPredicted RBP4.36□□□□□ -1.71
RFX3-204ENST00000382004 CLUHP3Q96NS8 147 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 IGLV1-47P01700 117 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 ODF3Q96PU9 254 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 EXPH5Q8NEV8 1989 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 M0QXV9 152 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 RBX1P62877 108 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 SIP14410 1827 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 HIVEP2P31629 2446 aa4.36□□□□□ -1.71
RFX3-204ENST00000382004 PLA2G5P39877 138 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 IMUPQ9GZP8 106 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 CD164L2Q6UWJ8 174 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 K7EQG2 157 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 M0QY20 66 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 IGLV2-14P01704 120 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 CRYGAP11844 174 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
RFX3-204ENST00000382004 LRRC75A-AS1Q8N1F1 130 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 PTPN13Q12923 2485 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 ATG2AQ2TAZ0 1938 aa4.35□□□□□ -1.71
RFX3-204ENST00000382004 ZNF73O43830 326 aaPredicted RBP4.34□□□□□ -1.71
RFX3-204ENST00000382004 TRBV6-4A0A1B0GX49 114 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 NOTCH4Q99466 2003 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 ZNF843Q8N446 348 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 LST1O00453 97 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 LINC00959A0A1B0GUT2 108 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 TNFRSF13BO14836 293 aaPredicted RBP4.34□□□□□ -1.71
RFX3-204ENST00000382004 LINC00474Q9P2X8 69 aa4.34□□□□□ -1.71
RFX3-204ENST00000382004 KRTAP27-1Q3LI81 207 aa4.34□□□□□ -1.72
RFX3-204ENST00000382004 Q6YL49 198 aa4.34□□□□□ -1.72
RFX3-204ENST00000382004 CSDC2Q9Y534 153 aaKnown RBP4.34□□□□□ -1.72
RFX3-204ENST00000382004 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 NUPR2A6NF83 97 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.33□□□□□ -1.72
RFX3-204ENST00000382004 IGLV2-8P01709 118 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 PRM2P04554 102 aa4.33□□□□□ -1.72
RFX3-204ENST00000382004 RPL28P46779 137 aaKnown RBP4.33□□□□□ -1.72
RFX3-204ENST00000382004 MRPS36P82909 103 aaKnown RBP4.33□□□□□ -1.72
RFX3-204ENST00000382004 LELP1Q5T871 98 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms