RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
PDGFB-202ENST00000381551 ZNF664Q8N3J9 261 aa10.35□□□□□ -0.75
PDGFB-202ENST00000381551 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
PDGFB-202ENST00000381551 EPPK1P58107 5090 aaKnown RBP10.34□□□□□ -0.75
PDGFB-202ENST00000381551 FAT2Q9NYQ8 4349 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 RAB5BP61020 215 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 MIAQ16674 131 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 SPANXA1Q9NS26 97 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 CYSLTR1Q9Y271 337 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 PYGO1Q9Y3Y4 419 aa10.34□□□□□ -0.75
PDGFB-202ENST00000381551 CRPP02741 224 aa10.33□□□□□ -0.76
PDGFB-202ENST00000381551 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
PDGFB-202ENST00000381551 OPRPNQ99935 248 aaPredicted RBP10.33□□□□□ -0.76
PDGFB-202ENST00000381551 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
PDGFB-202ENST00000381551 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
PDGFB-202ENST00000381551 IGIPA6NJ69 53 aa10.31□□□□□ -0.76
PDGFB-202ENST00000381551 MRPS36P82909 103 aaKnown RBP10.31□□□□□ -0.76
PDGFB-202ENST00000381551 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
PDGFB-202ENST00000381551 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
PDGFB-202ENST00000381551 RMI2Q96E14 147 aa10.31□□□□□ -0.76
PDGFB-202ENST00000381551 TM2D2Q9BX73 214 aa10.31□□□□□ -0.76
PDGFB-202ENST00000381551 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
PDGFB-202ENST00000381551 Q6ZUT4 128 aa10.3□□□□□ -0.76
PDGFB-202ENST00000381551 C1orf43Q9BWL3 253 aa10.3□□□□□ -0.76
PDGFB-202ENST00000381551 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
PDGFB-202ENST00000381551 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 A0A096LNJ9 63 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 LINC01549A6NIU2 74 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 RNASE13Q5GAN3 156 aaKnown RBP10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
PDGFB-202ENST00000381551 KRTAP26-1Q6PEX3 210 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 LINC00336Q6ZUF6 198 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 MAPKAPK5-AS1Q8N8E1 139 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
PDGFB-202ENST00000381551 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 LINC00959A0A1B0GUT2 108 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 NPSP0C0P6 89 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 TNP2Q05952 138 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 PMCHL1Q16048 86 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 ERASQ7Z444 233 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 SCGB3A1Q96QR1 104 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
PDGFB-202ENST00000381551 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
PDGFB-202ENST00000381551 PSCAO43653 123 aa10.27□□□□□ -0.77
PDGFB-202ENST00000381551 LINC00310P59036 64 aa10.27□□□□□ -0.77
PDGFB-202ENST00000381551 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
PDGFB-202ENST00000381551 NUPR1O60356 82 aa10.26□□□□□ -0.77
PDGFB-202ENST00000381551 SERF1AO75920 110 aa10.26□□□□□ -0.77
PDGFB-202ENST00000381551 HBDP02042 147 aa10.26□□□□□ -0.77
PDGFB-202ENST00000381551 VCX2Q9H322 139 aa10.26□□□□□ -0.77
PDGFB-202ENST00000381551 PKD1P98161 4303 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 LRCOL1A6NCL2 159 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 C1orf196B1AJZ1 125 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 CCL25O15444 150 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 HSBP1O75506 76 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 SS18Q15532 418 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 PDZD11Q5EBL8 140 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 CHCHD10Q8WYQ3 142 aaPredicted RBP10.25□□□□□ -0.77
PDGFB-202ENST00000381551 AMELXQ99217 191 aa10.25□□□□□ -0.77
PDGFB-202ENST00000381551 TRAV13-1A0A0B4J241 112 aa10.24□□□□□ -0.77
PDGFB-202ENST00000381551 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
PDGFB-202ENST00000381551 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
PDGFB-202ENST00000381551 TEX43Q6ZNM6 134 aa10.24□□□□□ -0.77
PDGFB-202ENST00000381551 FAM19A2Q8N3H0 131 aa10.24□□□□□ -0.77
PDGFB-202ENST00000381551 A0A087WTM6 91 aa10.23□□□□□ -0.77
PDGFB-202ENST00000381551 GAGE12HA6NDE8 117 aa10.23□□□□□ -0.77
PDGFB-202ENST00000381551 Q6ZN92 141 aa10.23□□□□□ -0.77
PDGFB-202ENST00000381551 LINC00173Q6ZV60 143 aa10.23□□□□□ -0.77
PDGFB-202ENST00000381551 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
PDGFB-202ENST00000381551 IFITM10A6NMD0 228 aa10.22□□□□□ -0.77
PDGFB-202ENST00000381551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.22□□□□□ -0.77
PDGFB-202ENST00000381551 XCL1P47992 114 aa10.22□□□□□ -0.77
PDGFB-202ENST00000381551 CD164L2Q6UWJ8 174 aa10.22□□□□□ -0.77
PDGFB-202ENST00000381551 FOXI1Q12951 378 aa10.21□□□□□ -0.77
PDGFB-202ENST00000381551 WFDC2Q14508 124 aa10.21□□□□□ -0.77
PDGFB-202ENST00000381551 COA6Q5JTJ3 125 aaKnown RBP10.21□□□□□ -0.77
PDGFB-202ENST00000381551 A0A1B0GVY2 172 aa10.2□□□□□ -0.78
PDGFB-202ENST00000381551 ATP5LO75964 103 aa10.2□□□□□ -0.78
PDGFB-202ENST00000381551 UBE2D1P51668 147 aa10.2□□□□□ -0.78
PDGFB-202ENST00000381551 C2orf88Q9BSF0 95 aa10.2□□□□□ -0.78
PDGFB-202ENST00000381551 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
PDGFB-202ENST00000381551 LECT2O14960 151 aa10.19□□□□□ -0.78
PDGFB-202ENST00000381551 NDUFA6P56556 154 aa10.19□□□□□ -0.78
PDGFB-202ENST00000381551 PMVKQ15126 192 aa10.19□□□□□ -0.78
PDGFB-202ENST00000381551 LINC00242Q5T6M2 205 aa10.19□□□□□ -0.78
PDGFB-202ENST00000381551 FAM19A3Q7Z5A8 133 aa10.18□□□□□ -0.78
PDGFB-202ENST00000381551 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
PDGFB-202ENST00000381551 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms