RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 C1orf196B1AJZ1 125 aa10.73□□□□□ -0.69
SNRPB-201ENST00000381342 RPL39P62891 51 aaKnown RBP10.73□□□□□ -0.69
SNRPB-201ENST00000381342 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
SNRPB-201ENST00000381342 Q8N8P6 123 aa10.73□□□□□ -0.69
SNRPB-201ENST00000381342 OR5A1Q8NGJ0 315 aa10.73□□□□□ -0.69
SNRPB-201ENST00000381342 TMEM101Q96IK0 257 aa10.73□□□□□ -0.69
SNRPB-201ENST00000381342 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
SNRPB-201ENST00000381342 IGLV10-54A0A075B6I4 117 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 LECT2O14960 151 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 WFDC2Q14508 124 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 UBE2D4Q9Y2X8 147 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 COX11Q9Y6N1 276 aa10.72□□□□□ -0.69
SNRPB-201ENST00000381342 IFI27P40305 119 aaPredicted RBP10.71□□□□□ -0.69
SNRPB-201ENST00000381342 KRTAP10-2P60368 255 aa10.71□□□□□ -0.69
SNRPB-201ENST00000381342 TMEM18Q96B42 140 aa10.71□□□□□ -0.69
SNRPB-201ENST00000381342 NXT2Q9NPJ8 142 aaKnown RBP10.71□□□□□ -0.69
SNRPB-201ENST00000381342 DYNC1H1Q14204 4646 aaKnown RBP10.7□□□□□ -0.7
SNRPB-201ENST00000381342 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNRPB-201ENST00000381342 RAB5BP61020 215 aa10.7□□□□□ -0.7
SNRPB-201ENST00000381342 CDPF1Q6NVV7 123 aa10.7□□□□□ -0.7
SNRPB-201ENST00000381342 KRTAP26-1Q6PEX3 210 aa10.7□□□□□ -0.7
SNRPB-201ENST00000381342 Q6ZUT4 128 aa10.7□□□□□ -0.7
SNRPB-201ENST00000381342 BAALCQ8WXS3 180 aa10.7□□□□□ -0.7
SNRPB-201ENST00000381342 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
SNRPB-201ENST00000381342 DGAT2L7PQ6IED9 249 aa10.69□□□□□ -0.7
SNRPB-201ENST00000381342 CDC42SE2Q9NRR3 84 aa10.69□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BKO60814 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BJP06899 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BOP23527 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BBP33778 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BDP58876 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BCP62807 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 SMAGPQ0VAQ4 97 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST2H2BEQ16778 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.68□□□□□ -0.7
SNRPB-201ENST00000381342 ZNF664Q8N3J9 261 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BHQ93079 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BNQ99877 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HIST1H2BMQ99879 126 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 DNAH5Q8TE73 4624 aa10.68□□□□□ -0.7
SNRPB-201ENST00000381342 HERC2O95714 4834 aa10.67□□□□□ -0.7
SNRPB-201ENST00000381342 TRAV8-4A0A0B4J246 113 aa10.67□□□□□ -0.7
SNRPB-201ENST00000381342 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
SNRPB-201ENST00000381342 Q8N814 137 aa10.67□□□□□ -0.7
SNRPB-201ENST00000381342 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
SNRPB-201ENST00000381342 SPANXA1Q9NS26 97 aa10.67□□□□□ -0.7
SNRPB-201ENST00000381342 CSDC2Q9Y534 153 aaKnown RBP10.67□□□□□ -0.7
SNRPB-201ENST00000381342 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
SNRPB-201ENST00000381342 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
SNRPB-201ENST00000381342 K7EMI3 77 aa10.65□□□□□ -0.7
SNRPB-201ENST00000381342 C2orf66Q6UXQ4 117 aa10.65□□□□□ -0.7
SNRPB-201ENST00000381342 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.7
SNRPB-201ENST00000381342 FAM104AQ969W3 186 aa10.65□□□□□ -0.7
SNRPB-201ENST00000381342 OPRPNQ99935 248 aaPredicted RBP10.65□□□□□ -0.7
SNRPB-201ENST00000381342 CYSLTR1Q9Y271 337 aa10.65□□□□□ -0.7
SNRPB-201ENST00000381342 GAGE12HA6NDE8 117 aa10.64□□□□□ -0.71
SNRPB-201ENST00000381342 C18orf32Q8TCD1 76 aa10.64□□□□□ -0.71
SNRPB-201ENST00000381342 USP17L23D6RBM5 183 aa10.63□□□□□ -0.71
SNRPB-201ENST00000381342 CCL25O15444 150 aa10.63□□□□□ -0.71
SNRPB-201ENST00000381342 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
SNRPB-201ENST00000381342 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.62□□□□□ -0.71
SNRPB-201ENST00000381342 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
SNRPB-201ENST00000381342 LINC01546A6NGU7 62 aa10.62□□□□□ -0.71
SNRPB-201ENST00000381342 GCSHP23434 173 aa10.62□□□□□ -0.71
SNRPB-201ENST00000381342 XCL1P47992 114 aa10.62□□□□□ -0.71
SNRPB-201ENST00000381342 MRPS36P82909 103 aaKnown RBP10.62□□□□□ -0.71
SNRPB-201ENST00000381342 NTN5Q8WTR8 489 aaPredicted RBP10.62□□□□□ -0.71
SNRPB-201ENST00000381342 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
SNRPB-201ENST00000381342 IGLV5-52A0A0A0MRZ9 124 aa10.61□□□□□ -0.71
SNRPB-201ENST00000381342 TRAV13-1A0A0B4J241 112 aa10.61□□□□□ -0.71
SNRPB-201ENST00000381342 SS18Q15532 418 aa10.61□□□□□ -0.71
SNRPB-201ENST00000381342 COA6Q5JTJ3 125 aaKnown RBP10.61□□□□□ -0.71
SNRPB-201ENST00000381342 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
SNRPB-201ENST00000381342 PYGO1Q9Y3Y4 419 aa10.61□□□□□ -0.71
SNRPB-201ENST00000381342 IFITM10A6NMD0 228 aa10.6□□□□□ -0.71
SNRPB-201ENST00000381342 FOXI1Q12951 378 aa10.6□□□□□ -0.71
SNRPB-201ENST00000381342 TOMM6Q96B49 74 aa10.6□□□□□ -0.71
SNRPB-201ENST00000381342 LRP1BQ9NZR2 4599 aa10.59□□□□□ -0.71
SNRPB-201ENST00000381342 TMEM141Q96I45 108 aa10.59□□□□□ -0.71
SNRPB-201ENST00000381342 KRTAP17-1Q9BYP8 105 aa10.59□□□□□ -0.71
SNRPB-201ENST00000381342 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
SNRPB-201ENST00000381342 C14orf177Q52M58 125 aa10.58□□□□□ -0.72
SNRPB-201ENST00000381342 BAGE3Q86Y29 109 aa10.58□□□□□ -0.72
SNRPB-201ENST00000381342 Q8N1X5 172 aa10.58□□□□□ -0.72
SNRPB-201ENST00000381342 IGIPA6NJ69 53 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 S100A6P06703 90 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 PRSS1P07477 247 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 G0S2P27469 103 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 NDUFA6P56556 154 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 C15orf56Q8N910 161 aa10.57□□□□□ -0.72
SNRPB-201ENST00000381342 LINC00614P0C842 121 aa10.56□□□□□ -0.72
SNRPB-201ENST00000381342 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
SNRPB-201ENST00000381342 Q6ZN92 141 aa10.56□□□□□ -0.72
SNRPB-201ENST00000381342 TEX43Q6ZNM6 134 aa10.56□□□□□ -0.72
SNRPB-201ENST00000381342 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms