RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 HIGD2BQ4VC39 106 aa15.49■□□□□ 0.07
SKI-201ENST00000378536 NFE4Q86UQ8 179 aa15.49■□□□□ 0.07
SKI-201ENST00000378536 FXYD2P54710 66 aa15.49■□□□□ 0.07
SKI-201ENST00000378536 ETDBQ3ZM63 59 aa15.49■□□□□ 0.07
SKI-201ENST00000378536 NCR3O14931 201 aa15.49■□□□□ 0.07
SKI-201ENST00000378536 C14orf177Q52M58 125 aa15.48■□□□□ 0.07
SKI-201ENST00000378536 TLN2Q9Y4G6 2542 aa15.48■□□□□ 0.07
SKI-201ENST00000378536 TSHBP01222 138 aa15.48■□□□□ 0.07
SKI-201ENST00000378536 ORMDL1Q9P0S3 153 aa15.48■□□□□ 0.07
SKI-201ENST00000378536 CDKN2A-AS1Q9UH64 79 aa15.48■□□□□ 0.07
SKI-201ENST00000378536 H0YGX0 51 aa15.47■□□□□ 0.07
SKI-201ENST00000378536 RNF183Q96D59 192 aa15.47■□□□□ 0.07
SKI-201ENST00000378536 KPRPQ5T749 579 aaPredicted RBP15.47■□□□□ 0.07
SKI-201ENST00000378536 PYGO1Q9Y3Y4 419 aa15.47■□□□□ 0.07
SKI-201ENST00000378536 USP9YO00507 2555 aaPredicted RBP15.47■□□□□ 0.07
SKI-201ENST00000378536 LOC100131303A0A0U1RQF7 123 aa15.46■□□□□ 0.07
SKI-201ENST00000378536 K7EP13 123 aa15.46■□□□□ 0.06
SKI-201ENST00000378536 Q8N976 141 aa15.46■□□□□ 0.06
SKI-201ENST00000378536 CHD9Q3L8U1 2897 aa15.46■□□□□ 0.06
SKI-201ENST00000378536 DEFB105AQ8NG35 78 aa15.45■□□□□ 0.06
SKI-201ENST00000378536 ZNF22P17026 224 aaPredicted RBP15.45■□□□□ 0.06
SKI-201ENST00000378536 LRRK2Q5S007 2527 aa15.45■□□□□ 0.06
SKI-201ENST00000378536 ZFYVE26Q68DK2 2539 aa15.45■□□□□ 0.06
SKI-201ENST00000378536 SORL1Q92673 2214 aa15.45■□□□□ 0.06
SKI-201ENST00000378536 JMJD1CQ15652 2540 aa15.44■□□□□ 0.06
SKI-201ENST00000378536 POLR2KP53803 58 aaKnown RBP15.44■□□□□ 0.06
SKI-201ENST00000378536 ZFAND6Q6FIF0 208 aa15.44■□□□□ 0.06
SKI-201ENST00000378536 BAALC-AS2P0C853 105 aa15.44■□□□□ 0.06
SKI-201ENST00000378536 PCNTO95613 3336 aa15.44■□□□□ 0.06
SKI-201ENST00000378536 A0A0J9YWU9 116 aa15.43■□□□□ 0.06
SKI-201ENST00000378536 TMEM223A0PJW6 202 aa15.43■□□□□ 0.06
SKI-201ENST00000378536 COX8CQ7Z4L0 72 aa15.42■□□□□ 0.06
SKI-201ENST00000378536 A0A0J9YXY3 114 aa15.42■□□□□ 0.06
SKI-201ENST00000378536 RBX1P62877 108 aa15.42■□□□□ 0.06
SKI-201ENST00000378536 UBL5Q9BZL1 73 aa15.42■□□□□ 0.06
SKI-201ENST00000378536 MIAQ16674 131 aa15.42■□□□□ 0.06
SKI-201ENST00000378536 GAS8-AS1O95177 125 aa15.41■□□□□ 0.06
SKI-201ENST00000378536 DOPEY1Q5JWR5 2465 aa15.41■□□□□ 0.06
SKI-201ENST00000378536 LELP1Q5T871 98 aa15.41■□□□□ 0.06
SKI-201ENST00000378536 UFSP1Q6NVU6 142 aa15.41■□□□□ 0.06
SKI-201ENST00000378536 C1orf158Q8N1D5 194 aa15.41■□□□□ 0.06
SKI-201ENST00000378536 NPSP0C0P6 89 aa15.41■□□□□ 0.06
SKI-201ENST00000378536 NANOS2P60321 138 aaKnown RBP15.4■□□□□ 0.06
SKI-201ENST00000378536 CLUHP3Q96NS8 147 aa15.4■□□□□ 0.06
SKI-201ENST00000378536 UBE2D3P61077 147 aa15.39■□□□□ 0.05
SKI-201ENST00000378536 UBE2D2P62837 147 aa15.39■□□□□ 0.05
SKI-201ENST00000378536 NTN5Q8WTR8 489 aaPredicted RBP15.38■□□□□ 0.05
SKI-201ENST00000378536 UBE2D4Q9Y2X8 147 aa15.38■□□□□ 0.05
SKI-201ENST00000378536 RETNQ9HD89 108 aa15.37■□□□□ 0.05
SKI-201ENST00000378536 C5orf42Q9H799 3197 aa15.36■□□□□ 0.05
SKI-201ENST00000378536 UBE2AP49459 152 aa15.36■□□□□ 0.05
SKI-201ENST00000378536 DIRC1Q969H9 104 aa15.36■□□□□ 0.05
SKI-201ENST00000378536 HAMPP81172 84 aa15.34■□□□□ 0.05
SKI-201ENST00000378536 MRPS36P82909 103 aaKnown RBP15.34■□□□□ 0.05
SKI-201ENST00000378536 IGKV2-24A0A0C4DH68 120 aa15.34■□□□□ 0.05
SKI-201ENST00000378536 EPG5Q9HCE0 2579 aa15.34■□□□□ 0.05
SKI-201ENST00000378536 RNASE8Q8TDE3 154 aaKnown RBP15.33■□□□□ 0.05
SKI-201ENST00000378536 SPANXCQ9NY87 97 aa15.33■□□□□ 0.05
SKI-201ENST00000378536 RBMY1FQ15415 496 aaKnown RBP15.33■□□□□ 0.04
SKI-201ENST00000378536 CD164L2Q6UWJ8 174 aa15.32■□□□□ 0.04
SKI-201ENST00000378536 ANKRD29Q8N6D5 301 aa15.32■□□□□ 0.04
SKI-201ENST00000378536 COL27A1Q8IZC6 1860 aaPredicted RBP15.32■□□□□ 0.04
SKI-201ENST00000378536 IBA57-AS1B1ANH7 110 aa15.31■□□□□ 0.04
SKI-201ENST00000378536 H3BQ85 93 aa15.3■□□□□ 0.04
SKI-201ENST00000378536 LINC00959A0A1B0GUT2 108 aa15.3■□□□□ 0.04
SKI-201ENST00000378536 LINC01620Q4KN68 170 aa15.3■□□□□ 0.04
SKI-201ENST00000378536 FASNP49327 2511 aaKnown RBP15.3■□□□□ 0.04
SKI-201ENST00000378536 TAX1BP3O14907 124 aa15.3■□□□□ 0.04
SKI-201ENST00000378536 LECT2O14960 151 aa15.29■□□□□ 0.04
SKI-201ENST00000378536 FSHBP01225 129 aa15.29■□□□□ 0.04
SKI-201ENST00000378536 IGKV2D-26A0A0A0MRZ7 120 aa15.29■□□□□ 0.04
SKI-201ENST00000378536 RANBP2P49792 3224 aaKnown RBP15.28■□□□□ 0.04
SKI-201ENST00000378536 IGLV2-18A0A075B6J9 118 aa15.27■□□□□ 0.04
SKI-201ENST00000378536 CLEC2BQ92478 149 aa15.27■□□□□ 0.03
SKI-201ENST00000378536 DSCAML1Q8TD84 2053 aa15.27■□□□□ 0.03
SKI-201ENST00000378536 UBE2D1P51668 147 aa15.27■□□□□ 0.03
SKI-201ENST00000378536 A0A0B4J2C4 111 aa15.26■□□□□ 0.03
SKI-201ENST00000378536 SYCNQ0VAF6 134 aa15.26■□□□□ 0.03
SKI-201ENST00000378536 MAPKAPK5-AS1Q8N8E1 139 aa15.26■□□□□ 0.03
SKI-201ENST00000378536 ANKRD17O75179 2603 aaKnown RBP15.26■□□□□ 0.03
SKI-201ENST00000378536 TET2Q6N021 2002 aaPredicted RBP15.26■□□□□ 0.03
SKI-201ENST00000378536 POLQO75417 2590 aa15.26■□□□□ 0.03
SKI-201ENST00000378536 CDC42SE2Q9NRR3 84 aa15.26■□□□□ 0.03
SKI-201ENST00000378536 FUSP35637 526 aaKnown RBP eCLIP15.26■□□□□ 0.031e-6■■■□□ 18.6
SKI-201ENST00000378536 BEAN1Q3B7T3 259 aa15.26■□□□□ 0.03
SKI-201ENST00000378536 FHL2Q14192 279 aa15.25■□□□□ 0.03
SKI-201ENST00000378536 SPANXB1Q9NS25 103 aaPredicted RBP15.25■□□□□ 0.03
SKI-201ENST00000378536 C2CD3Q4AC94 2353 aa15.25■□□□□ 0.03
SKI-201ENST00000378536 COX7BP24311 80 aa15.25■□□□□ 0.03
SKI-201ENST00000378536 FHL3Q13643 280 aa15.24■□□□□ 0.03
SKI-201ENST00000378536 LINC00308Q8TCZ7 52 aa15.24■□□□□ 0.03
SKI-201ENST00000378536 IGIPA6NJ69 53 aa15.23■□□□□ 0.03
SKI-201ENST00000378536 A8MZ25 164 aa15.23■□□□□ 0.03
SKI-201ENST00000378536 FN1P02751 2386 aaKnown RBP15.23■□□□□ 0.03
SKI-201ENST00000378536 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.23■□□□□ 0.03
SKI-201ENST00000378536 PTH2Q96A98 100 aa15.22■□□□□ 0.03
SKI-201ENST00000378536 Q6ZTC4 211 aa15.22■□□□□ 0.03
SKI-201ENST00000378536 SPANXDQ9BXN6 97 aa15.22■□□□□ 0.03
SKI-201ENST00000378536 TP73-AS1Q9UF72 201 aa15.21■□□□□ 0.03
SKI-201ENST00000378536 NUPR2A6NF83 97 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms