RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 LAMTOR2Q9Y2Q5 125 aa7.85□□□□□ -1.15
DEPDC4-202ENST00000378244 IFI27P40305 119 aaPredicted RBP7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 PKIAP61925 76 aa7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 RPL39P62891 51 aaKnown RBP7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 NFE4Q86UQ8 179 aa7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 ALKBH7Q9BT30 221 aaPredicted RBP7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 A0A1B0GUV1 79 aa7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 REG3AQ06141 175 aa7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 LINC00336Q6ZUF6 198 aa7.84□□□□□ -1.15
DEPDC4-202ENST00000378244 DNAH6Q9C0G6 4158 aa7.84□□□□□ -1.16
DEPDC4-202ENST00000378244 RPL32P62910 135 aaKnown RBP7.83□□□□□ -1.16
DEPDC4-202ENST00000378244 RNASE13Q5GAN3 156 aaKnown RBP7.83□□□□□ -1.16
DEPDC4-202ENST00000378244 DGAT2L7PQ6IED9 249 aa7.83□□□□□ -1.16
DEPDC4-202ENST00000378244 LECT2O14960 151 aa7.83□□□□□ -1.16
DEPDC4-202ENST00000378244 PRSS3P2Q8NHM4 247 aa7.83□□□□□ -1.16
DEPDC4-202ENST00000378244 Q8N8P6 123 aa7.82□□□□□ -1.16
DEPDC4-202ENST00000378244 OR5A1Q8NGJ0 315 aa7.82□□□□□ -1.16
DEPDC4-202ENST00000378244 TMEM101Q96IK0 257 aa7.82□□□□□ -1.16
DEPDC4-202ENST00000378244 FAT2Q9NYQ8 4349 aa7.82□□□□□ -1.16
DEPDC4-202ENST00000378244 H7C423 109 aa7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 G0S2P27469 103 aa7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 FUSP35637 526 aaKnown RBP eCLIP7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 Q0VG73 95 aa7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 MAPKAPK5-AS1Q8N8E1 139 aa7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 OPRPNQ99935 248 aaPredicted RBP7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 PRR34Q9NV39 138 aa7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 UBE2D4Q9Y2X8 147 aa7.81□□□□□ -1.16
DEPDC4-202ENST00000378244 MIAQ16674 131 aa7.8□□□□□ -1.16
DEPDC4-202ENST00000378244 NXT2Q9NPJ8 142 aaKnown RBP7.8□□□□□ -1.16
DEPDC4-202ENST00000378244 ZNF25P17030 456 aaPredicted RBP7.8□□□□□ -1.16
DEPDC4-202ENST00000378244 BAALCQ8WXS3 180 aa7.8□□□□□ -1.16
DEPDC4-202ENST00000378244 TMEM18Q96B42 140 aa7.8□□□□□ -1.16
DEPDC4-202ENST00000378244 TM2D2Q9BX73 214 aa7.8□□□□□ -1.16
DEPDC4-202ENST00000378244 TRGC2P03986 189 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 CDC42SE2Q9NRR3 84 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 COLCA2A8K830 154 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 ZNF664Q8N3J9 261 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 RMI2Q96E14 147 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 DNAH17Q9UFH2 4485 aa7.79□□□□□ -1.16
DEPDC4-202ENST00000378244 A0A087WTM6 91 aa7.78□□□□□ -1.16
DEPDC4-202ENST00000378244 WFDC2Q14508 124 aa7.78□□□□□ -1.16
DEPDC4-202ENST00000378244 C2orf66Q6UXQ4 117 aa7.78□□□□□ -1.16
DEPDC4-202ENST00000378244 Q6ZUT4 128 aa7.78□□□□□ -1.16
DEPDC4-202ENST00000378244 C18orf32Q8TCD1 76 aa7.78□□□□□ -1.16
DEPDC4-202ENST00000378244 ORMDL2Q53FV1 153 aa7.78□□□□□ -1.16
DEPDC4-202ENST00000378244 TRAV13-1A0A0B4J241 112 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 A0A1B0GVY2 172 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 FA2HQ7L5A8 372 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 COX11Q9Y6N1 276 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 MALP21145 153 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 XCL1P47992 114 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 KRTAP10-2P60368 255 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 SPATA12Q7Z6I5 190 aa7.77□□□□□ -1.17
DEPDC4-202ENST00000378244 PKHD1P08F94 4074 aa7.76□□□□□ -1.17
DEPDC4-202ENST00000378244 LRCOL1A6NCL2 159 aa7.76□□□□□ -1.17
DEPDC4-202ENST00000378244 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 SMAGPQ0VAQ4 97 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 PMCHL1Q16048 86 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 CHCHD10Q8WYQ3 142 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 CSDC2Q9Y534 153 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 PKD1P98161 4303 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 TRAV8-4A0A0B4J246 113 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 URB1-AS1Q96HZ7 61 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 SPANXA1Q9NS26 97 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 AP5S1Q9NUS5 200 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 HECTD4Q9Y4D8 3996 aa7.75□□□□□ -1.17
DEPDC4-202ENST00000378244 GAGE12HA6NDE8 117 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 K7EMI3 77 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 CCL25O15444 150 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 LINC00614P0C842 121 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 KRTAP26-1Q6PEX3 210 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 TIMM21Q9BVV7 248 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 ERASQ7Z444 233 aa7.74□□□□□ -1.17
DEPDC4-202ENST00000378244 GAGE10A6NGK3 116 aa7.73□□□□□ -1.17
DEPDC4-202ENST00000378244 SS18Q15532 418 aa7.73□□□□□ -1.17
DEPDC4-202ENST00000378244 IGLV4-3A0A075B6K6 122 aa7.73□□□□□ -1.17
DEPDC4-202ENST00000378244 Q8N814 137 aa7.73□□□□□ -1.17
DEPDC4-202ENST00000378244 IFITM10A6NMD0 228 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 USP17L23D6RBM5 183 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 BAGE3Q86Y29 109 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 TMEM141Q96I45 108 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 SCGB3A1Q96QR1 104 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 PCP4L1A6NKN8 68 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 C1orf196B1AJZ1 125 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 TOMM6Q96B49 74 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 PYGO1Q9Y3Y4 419 aa7.72□□□□□ -1.17
DEPDC4-202ENST00000378244 C16orf90A8MZG2 172 aa7.71□□□□□ -1.18
DEPDC4-202ENST00000378244 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
DEPDC4-202ENST00000378244 Q6ZN92 141 aa7.71□□□□□ -1.18
DEPDC4-202ENST00000378244 LINC01546A6NGU7 62 aa7.7□□□□□ -1.18
DEPDC4-202ENST00000378244 LINC01620Q4KN68 170 aa7.7□□□□□ -1.18
DEPDC4-202ENST00000378244 TEX43Q6ZNM6 134 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms