RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.68□□□□□ -0.06
CLN5-201ENST00000377453 TEX49A0A1B0GTD5 131 aa14.68□□□□□ -0.06
CLN5-201ENST00000377453 TINCRA0A1B0GVN0 87 aa14.67□□□□□ -0.06
CLN5-201ENST00000377453 DEFB114Q30KQ6 69 aa14.67□□□□□ -0.06
CLN5-201ENST00000377453 A8MTW9 85 aa14.67□□□□□ -0.06
CLN5-201ENST00000377453 EDA2RQ9HAV5 297 aa14.66□□□□□ -0.06
CLN5-201ENST00000377453 HELZ2Q9BYK8 2649 aaKnown RBP14.66□□□□□ -0.06
CLN5-201ENST00000377453 TRGV1A0A0A0MS02 117 aa14.65□□□□□ -0.06
CLN5-201ENST00000377453 A0A1B0GV72 72 aa14.65□□□□□ -0.06
CLN5-201ENST00000377453 ODF3L2Q3SX64 289 aa14.65□□□□□ -0.06
CLN5-201ENST00000377453 SPANXA1Q9NS26 97 aa14.65□□□□□ -0.06
CLN5-201ENST00000377453 ICOSQ9Y6W8 199 aa14.65□□□□□ -0.06
CLN5-201ENST00000377453 MIAQ16674 131 aa14.65□□□□□ -0.06
CLN5-201ENST00000377453 INSP01308 110 aa14.64□□□□□ -0.07
CLN5-201ENST00000377453 ATXN8Q156A1 80 aa14.64□□□□□ -0.07
CLN5-201ENST00000377453 PEMTQ9UBM1 199 aa14.64□□□□□ -0.07
CLN5-201ENST00000377453 TMEM101Q96IK0 257 aa14.64□□□□□ -0.07
CLN5-201ENST00000377453 Q96MF0 132 aa14.64□□□□□ -0.07
CLN5-201ENST00000377453 CIDEAO60543 219 aa14.63□□□□□ -0.07
CLN5-201ENST00000377453 DGAT2L7PQ6IED9 249 aa14.63□□□□□ -0.07
CLN5-201ENST00000377453 C4orf3Q8WVX3 66 aa14.63□□□□□ -0.07
CLN5-201ENST00000377453 TRAV13-1A0A0B4J241 112 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 C1orf158Q8N1D5 194 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 ITPR2Q14571 2701 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 RS1O15537 224 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 RPL13AP40429 203 aaKnown RBP14.62□□□□□ -0.07
CLN5-201ENST00000377453 ZFAND6Q6FIF0 208 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 Q6ZTI0 123 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 SPANXDQ9BXN6 97 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 SPANXCQ9NY87 97 aa14.62□□□□□ -0.07
CLN5-201ENST00000377453 ACANP16112 2415 aa14.61□□□□□ -0.07
CLN5-201ENST00000377453 ITPR3Q14573 2671 aa14.61□□□□□ -0.07
CLN5-201ENST00000377453 TRBV30A0A0K0K1B3 111 aa14.61□□□□□ -0.07
CLN5-201ENST00000377453 CRLF1O75462 422 aa14.61□□□□□ -0.07
CLN5-201ENST00000377453 WFDC10AQ9H1F0 79 aa14.61□□□□□ -0.07
CLN5-201ENST00000377453 BEAN1Q3B7T3 259 aa14.6□□□□□ -0.07
CLN5-201ENST00000377453 Q9H8V8 135 aa14.6□□□□□ -0.07
CLN5-201ENST00000377453 TRAV26-1A0A087WT03 109 aa14.59□□□□□ -0.07
CLN5-201ENST00000377453 PLA2G2AP14555 144 aa14.59□□□□□ -0.07
CLN5-201ENST00000377453 H7C423 109 aa14.59□□□□□ -0.07
CLN5-201ENST00000377453 LINC00242Q5T6M2 205 aa14.59□□□□□ -0.07
CLN5-201ENST00000377453 NTM-AS1Q6ZSK4 140 aa14.59□□□□□ -0.07
CLN5-201ENST00000377453 SETXQ7Z333 2677 aaKnown RBP14.58□□□□□ -0.07
CLN5-201ENST00000377453 GAGE12JA6NER3 117 aa14.58□□□□□ -0.08
CLN5-201ENST00000377453 GAGE4Q13068 117 aa14.58□□□□□ -0.08
CLN5-201ENST00000377453 GAGE5Q13069 117 aa14.58□□□□□ -0.08
CLN5-201ENST00000377453 STHQ8IWL8 128 aa14.58□□□□□ -0.08
CLN5-201ENST00000377453 Q8N2B8 174 aa14.58□□□□□ -0.08
CLN5-201ENST00000377453 C2orf82Q6UX34 121 aa14.58□□□□□ -0.08
CLN5-201ENST00000377453 TRBV10-2A0A0K0K1G8 114 aa14.57□□□□□ -0.08
CLN5-201ENST00000377453 FLNAP21333 2647 aaKnown RBP14.57□□□□□ -0.08
CLN5-201ENST00000377453 RNF183Q96D59 192 aa14.56□□□□□ -0.08
CLN5-201ENST00000377453 CITED2Q99967 270 aaPredicted RBP14.56□□□□□ -0.08
CLN5-201ENST00000377453 TRAV4A0A0B4J268 109 aa14.55□□□□□ -0.08
CLN5-201ENST00000377453 LOC100131303A0A0U1RQF7 123 aa14.55□□□□□ -0.08
CLN5-201ENST00000377453 DEFB113Q30KQ7 82 aa14.55□□□□□ -0.08
CLN5-201ENST00000377453 SOSTDC1Q6X4U4 206 aa14.55□□□□□ -0.08
CLN5-201ENST00000377453 CLUHP3Q96NS8 147 aa14.55□□□□□ -0.08
CLN5-201ENST00000377453 DNAJC30Q96LL9 226 aa14.54□□□□□ -0.08
CLN5-201ENST00000377453 NOP10Q9NPE3 64 aaKnown RBP14.54□□□□□ -0.08
CLN5-201ENST00000377453 NDUFA1O15239 70 aa14.54□□□□□ -0.08
CLN5-201ENST00000377453 UBE2WQ96B02 151 aa14.53□□□□□ -0.08
CLN5-201ENST00000377453 IGKV3OR2-268A0A0C4DH90 116 aa14.52□□□□□ -0.08
CLN5-201ENST00000377453 PIK3CD-AS1Q5SR53 167 aa14.52□□□□□ -0.08
CLN5-201ENST00000377453 IGLV5-45A0A087WSX0 123 aa14.52□□□□□ -0.09
CLN5-201ENST00000377453 SMIM1B2RUZ4 78 aa14.52□□□□□ -0.09
CLN5-201ENST00000377453 TIRAPP58753 221 aa14.52□□□□□ -0.09
CLN5-201ENST00000377453 LINC00308Q8TCZ7 52 aa14.52□□□□□ -0.09
CLN5-201ENST00000377453 MTORP42345 2549 aa14.51□□□□□ -0.09
CLN5-201ENST00000377453 TRAV8-4A0A0B4J246 113 aa14.51□□□□□ -0.09
CLN5-201ENST00000377453 KRTAP1-3Q8IUG1 177 aa14.51□□□□□ -0.09
CLN5-201ENST00000377453 ESM1Q9NQ30 184 aa14.51□□□□□ -0.09
CLN5-201ENST00000377453 K7EQD1 137 aa14.5□□□□□ -0.09
CLN5-201ENST00000377453 RPL35AP18077 110 aaKnown RBP14.5□□□□□ -0.09
CLN5-201ENST00000377453 CITED1Q99966 193 aa14.5□□□□□ -0.09
CLN5-201ENST00000377453 DNAJC9-AS1A6NH13 148 aa14.5□□□□□ -0.09
CLN5-201ENST00000377453 TMEM262E9PQX1 116 aa14.5□□□□□ -0.09
CLN5-201ENST00000377453 COX6CP09669 75 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 WFDC11Q8NEX6 87 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 CCL24O00175 119 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 LST1O00453 97 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 TTC32Q5I0X7 151 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 MEIG1Q5JSS6 88 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 IL17DQ8TAD2 202 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 YAE1D1Q9NRH1 226 aa14.49□□□□□ -0.09
CLN5-201ENST00000377453 IGLV5-39A0A0G2JS06 123 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 M0QXV9 152 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 GAGE7O76087 117 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 GAGE12FP0CL80 117 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 GAGE12GP0CL81 117 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 GAGE12IP0CL82 117 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 RPL36AP83881 106 aaKnown RBP14.48□□□□□ -0.09
CLN5-201ENST00000377453 PRIMA1Q86XR5 153 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 RPL36ALQ969Q0 106 aaKnown RBP14.48□□□□□ -0.09
CLN5-201ENST00000377453 NOTCH2Q04721 2471 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 HECTD1Q9ULT8 2610 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 TEX29Q8N6K0 151 aa14.48□□□□□ -0.09
CLN5-201ENST00000377453 HERVK_113P63121 156 aa14.47□□□□□ -0.09
CLN5-201ENST00000377453 KMT2BQ9UMN6 2715 aaPredicted RBP14.47□□□□□ -0.09
CLN5-201ENST00000377453 GIG44P09565 113 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms