RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 MRPL52Q86TS9 123 aaKnown RBP9.2□□□□□ -0.94
CLCN6-203ENST00000376490 CIRBP-AS1Q8TBR5 109 aa9.2□□□□□ -0.94
CLCN6-203ENST00000376490 CDC42SE2Q9NRR3 84 aa9.2□□□□□ -0.94
CLCN6-203ENST00000376490 SRRM2Q9UQ35 2752 aaKnown RBP9.2□□□□□ -0.94
CLCN6-203ENST00000376490 LINC00959A0A1B0GUT2 108 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 D6R8Y8 96 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 F8W036 122 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 PNRC1Q12796 327 aaPredicted RBP9.19□□□□□ -0.94
CLCN6-203ENST00000376490 SDIM1Q6ZPB5 146 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 C15orf56Q8N910 161 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 VPS13BQ7Z7G8 4022 aa9.19□□□□□ -0.94
CLCN6-203ENST00000376490 MT-ND4LP03901 98 aa9.18□□□□□ -0.94
CLCN6-203ENST00000376490 CNBPP62633 177 aaKnown RBP9.18□□□□□ -0.94
CLCN6-203ENST00000376490 FOXI1Q12951 378 aa9.18□□□□□ -0.94
CLCN6-203ENST00000376490 CFAP161Q6P656 301 aa9.18□□□□□ -0.94
CLCN6-203ENST00000376490 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
CLCN6-203ENST00000376490 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
CLCN6-203ENST00000376490 CCL25O15444 150 aa9.17□□□□□ -0.94
CLCN6-203ENST00000376490 NPYP01303 97 aa9.17□□□□□ -0.94
CLCN6-203ENST00000376490 XCL1P47992 114 aa9.17□□□□□ -0.94
CLCN6-203ENST00000376490 ATP5L2Q7Z4Y8 100 aa9.17□□□□□ -0.94
CLCN6-203ENST00000376490 UBE2D4Q9Y2X8 147 aa9.17□□□□□ -0.94
CLCN6-203ENST00000376490 PANO1I0J062 215 aa9.16□□□□□ -0.94
CLCN6-203ENST00000376490 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
CLCN6-203ENST00000376490 SS18Q15532 418 aa9.16□□□□□ -0.94
CLCN6-203ENST00000376490 HIGD2BQ4VC39 106 aa9.16□□□□□ -0.94
CLCN6-203ENST00000376490 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
CLCN6-203ENST00000376490 PPBPP02775 128 aa9.15□□□□□ -0.94
CLCN6-203ENST00000376490 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.94
CLCN6-203ENST00000376490 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
CLCN6-203ENST00000376490 TMEM136Q6ZRR5 245 aa9.15□□□□□ -0.94
CLCN6-203ENST00000376490 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.94
CLCN6-203ENST00000376490 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
CLCN6-203ENST00000376490 FLG2Q5D862 2391 aaPredicted RBP9.15□□□□□ -0.95
CLCN6-203ENST00000376490 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
CLCN6-203ENST00000376490 TCAPO15273 167 aa9.14□□□□□ -0.95
CLCN6-203ENST00000376490 ADCYAP1P18509 176 aa9.14□□□□□ -0.95
CLCN6-203ENST00000376490 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
CLCN6-203ENST00000376490 PRELID3AQ96N28 172 aa9.14□□□□□ -0.95
CLCN6-203ENST00000376490 IGHV3-64A0A075B6Q5 118 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 PHOX2AO14813 284 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 CD164L2Q6UWJ8 174 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 TIMM21Q9BVV7 248 aa9.13□□□□□ -0.95
CLCN6-203ENST00000376490 GVQW2A0A096LPI5 108 aaPredicted RBP9.12□□□□□ -0.95
CLCN6-203ENST00000376490 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
CLCN6-203ENST00000376490 LINC00526Q96FQ7 95 aa9.12□□□□□ -0.95
CLCN6-203ENST00000376490 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
CLCN6-203ENST00000376490 C1orf196B1AJZ1 125 aa9.11□□□□□ -0.95
CLCN6-203ENST00000376490 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
CLCN6-203ENST00000376490 Q6ZUT4 128 aa9.11□□□□□ -0.95
CLCN6-203ENST00000376490 FAM104AQ969W3 186 aa9.11□□□□□ -0.95
CLCN6-203ENST00000376490 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
CLCN6-203ENST00000376490 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
CLCN6-203ENST00000376490 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
CLCN6-203ENST00000376490 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
CLCN6-203ENST00000376490 KRTAP10-4P60372 401 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-203ENST00000376490 COX6A2Q02221 97 aa9.1□□□□□ -0.95
CLCN6-203ENST00000376490 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
CLCN6-203ENST00000376490 PRSS47A8MTI9 375 aa9.09□□□□□ -0.95
CLCN6-203ENST00000376490 RAB5AP20339 215 aa9.09□□□□□ -0.95
CLCN6-203ENST00000376490 PRSS3P2Q8NHM4 247 aa9.09□□□□□ -0.95
CLCN6-203ENST00000376490 COMMD7Q86VX2 200 aa9.08□□□□□ -0.96
CLCN6-203ENST00000376490 IMMP2LQ96T52 175 aa9.08□□□□□ -0.96
CLCN6-203ENST00000376490 SPANXA1Q9NS26 97 aa9.08□□□□□ -0.96
CLCN6-203ENST00000376490 A0A087WYN8 130 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 COX7A2LO14548 114 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 MALP21145 153 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 C5orf38Q86SI9 138 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 SEC11CQ9BY50 192 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 LAMTOR2Q9Y2Q5 125 aa9.07□□□□□ -0.96
CLCN6-203ENST00000376490 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
CLCN6-203ENST00000376490 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
CLCN6-203ENST00000376490 SPACA4Q8TDM5 124 aa9.06□□□□□ -0.96
CLCN6-203ENST00000376490 IGKV2-24A0A0C4DH68 120 aa9.05□□□□□ -0.96
CLCN6-203ENST00000376490 Q8N8P6 123 aa9.05□□□□□ -0.96
CLCN6-203ENST00000376490 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
CLCN6-203ENST00000376490 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
CLCN6-203ENST00000376490 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
CLCN6-203ENST00000376490 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
CLCN6-203ENST00000376490 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
CLCN6-203ENST00000376490 A0A096LNI7 61 aa9.03□□□□□ -0.96
CLCN6-203ENST00000376490 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
CLCN6-203ENST00000376490 C10orf91Q5T1B1 145 aa9.03□□□□□ -0.96
CLCN6-203ENST00000376490 CARD19Q96LW7 228 aa9.03□□□□□ -0.96
CLCN6-203ENST00000376490 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
CLCN6-203ENST00000376490 PYGO1Q9Y3Y4 419 aa9.03□□□□□ -0.96
CLCN6-203ENST00000376490 TRAV9-1A0A075B6T8 112 aa9.02□□□□□ -0.97
CLCN6-203ENST00000376490 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
CLCN6-203ENST00000376490 IGLV4-3A0A075B6K6 122 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms