RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PRB4P10163 310 aaPredicted RBP7.61□□□□□ -1.19
PTCH1-204ENST00000375290 TSHBP01222 138 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 IGHV4-59P01825 116 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 MIFP14174 115 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 REG3AQ06141 175 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 PRO0628Q9UI54 55 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 Q9HAA7 133 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 NRGNQ92686 78 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 CCDC179H3BU77 68 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 DSCAML1Q8TD84 2053 aa7.6□□□□□ -1.19
PTCH1-204ENST00000375290 SEM1Q6ZVN7 128 aa7.59□□□□□ -1.19
PTCH1-204ENST00000375290 GPR179Q6PRD1 2367 aa7.59□□□□□ -1.19
PTCH1-204ENST00000375290 CXCL6P80162 114 aa7.59□□□□□ -1.19
PTCH1-204ENST00000375290 UNQ9165/PRO28630Q6UXU0 137 aa7.59□□□□□ -1.19
PTCH1-204ENST00000375290 DSCAMO60469 2012 aa7.59□□□□□ -1.19
PTCH1-204ENST00000375290 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
PTCH1-204ENST00000375290 SPRNQ5BIV9 151 aa7.58□□□□□ -1.2
PTCH1-204ENST00000375290 IL17DQ8TAD2 202 aa7.58□□□□□ -1.2
PTCH1-204ENST00000375290 CRIP2P52943 208 aaPredicted RBP7.58□□□□□ -1.2
PTCH1-204ENST00000375290 C10orf142B7Z368 130 aa7.58□□□□□ -1.2
PTCH1-204ENST00000375290 RAI1Q7Z5J4 1906 aaPredicted RBP7.57□□□□□ -1.2
PTCH1-204ENST00000375290 AGRNO00468 2067 aa7.57□□□□□ -1.2
PTCH1-204ENST00000375290 ACACBO00763 2458 aa7.57□□□□□ -1.2
PTCH1-204ENST00000375290 M0R378 163 aa7.57□□□□□ -1.2
PTCH1-204ENST00000375290 PRRC2AP48634 2157 aaKnown RBP7.57□□□□□ -1.2
PTCH1-204ENST00000375290 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
PTCH1-204ENST00000375290 SLURP1P55000 103 aa7.57□□□□□ -1.2
PTCH1-204ENST00000375290 DEFB105AQ8NG35 78 aa7.57□□□□□ -1.2
PTCH1-204ENST00000375290 AMELXQ99217 191 aa7.57□□□□□ -1.2
PTCH1-204ENST00000375290 Q96MF0 132 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 C3orf56Q8N813 242 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 LINC00694P0DN24 101 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 Q6ZQT7 251 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 URB1-AS1Q96HZ7 61 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 DEFB113Q30KQ7 82 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 KLK5Q9Y337 293 aaPredicted RBP7.56□□□□□ -1.2
PTCH1-204ENST00000375290 NCR3O14931 201 aa7.56□□□□□ -1.2
PTCH1-204ENST00000375290 APRG1Q8IVJ8 170 aa7.55□□□□□ -1.2
PTCH1-204ENST00000375290 CHCHD10Q8WYQ3 142 aaPredicted RBP7.55□□□□□ -1.2
PTCH1-204ENST00000375290 IGHV4-61A0A0C4DH41 118 aa7.55□□□□□ -1.2
PTCH1-204ENST00000375290 CLPSL2Q6UWE3 100 aa7.55□□□□□ -1.2
PTCH1-204ENST00000375290 SORL1Q92673 2214 aa7.55□□□□□ -1.2
PTCH1-204ENST00000375290 SMAD5-AS1Q9Y6J3 95 aa7.55□□□□□ -1.2
PTCH1-204ENST00000375290 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
PTCH1-204ENST00000375290 IGLV4-69A0A075B6H9 119 aa7.54□□□□□ -1.2
PTCH1-204ENST00000375290 SPTSSBQ8NFR3 76 aa7.54□□□□□ -1.2
PTCH1-204ENST00000375290 CRYGDP07320 174 aa7.54□□□□□ -1.2
PTCH1-204ENST00000375290 ZFP36P26651 326 aaKnown RBP7.54□□□□□ -1.2
PTCH1-204ENST00000375290 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
PTCH1-204ENST00000375290 C6orf99Q4VX62 202 aa7.54□□□□□ -1.2
PTCH1-204ENST00000375290 FAM19A5Q7Z5A7 132 aaPredicted RBP7.53□□□□□ -1.2
PTCH1-204ENST00000375290 ZNF73O43830 326 aaPredicted RBP7.53□□□□□ -1.2
PTCH1-204ENST00000375290 CLPSL1A2RUU4 121 aa7.53□□□□□ -1.2
PTCH1-204ENST00000375290 SMIM11BQ8TCY0 68 aa7.53□□□□□ -1.2
PTCH1-204ENST00000375290 IGLV10-54A0A075B6I4 117 aa7.52□□□□□ -1.2
PTCH1-204ENST00000375290 IGLV2-18A0A075B6J9 118 aa7.52□□□□□ -1.2
PTCH1-204ENST00000375290 A0A087WZ39 114 aa7.52□□□□□ -1.2
PTCH1-204ENST00000375290 Q8N814 137 aa7.52□□□□□ -1.2
PTCH1-204ENST00000375290 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 H0Y9J4 135 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 A6NED7 52 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 LMO4P61968 165 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 DEFB114Q30KQ6 69 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 LINC00269Q8N2A0 174 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 DCANP1Q8TF63 244 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
PTCH1-204ENST00000375290 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 PTPRSQ13332 1948 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 LINC01548A6NM66 108 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 KLK12Q9UKR0 248 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 PTPRQQ9UMZ3 2332 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 PRYO14603 147 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 FAM208BQ5VWN6 2430 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
PTCH1-204ENST00000375290 A0A1B0GUV1 79 aa7.5□□□□□ -1.21
PTCH1-204ENST00000375290 MPLKIPQ8TAP9 179 aa7.5□□□□□ -1.21
PTCH1-204ENST00000375290 Q6YL49 198 aa7.5□□□□□ -1.21
PTCH1-204ENST00000375290 LIMD2Q9BT23 127 aa7.5□□□□□ -1.21
PTCH1-204ENST00000375290 hDV103S1A0JD37 113 aa7.5□□□□□ -1.21
PTCH1-204ENST00000375290 Q8N9L7 120 aa7.5□□□□□ -1.21
PTCH1-204ENST00000375290 IGKV4-1P06312 121 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 C1orf229Q6ZS94 237 aaPredicted RBP7.49□□□□□ -1.21
PTCH1-204ENST00000375290 SBSPONQ8IVN8 264 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 A0A096LNJ9 63 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 ADORA2A-AS1P86434 159 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 LELP1Q5T871 98 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 MYO9AB2RTY4 2548 aa7.49□□□□□ -1.21
PTCH1-204ENST00000375290 Q6ZQY7 126 aa7.48□□□□□ -1.21
PTCH1-204ENST00000375290 Q6ZS46 218 aa7.48□□□□□ -1.21
PTCH1-204ENST00000375290 Q6ZTI0 123 aa7.48□□□□□ -1.21
PTCH1-204ENST00000375290 DEFB121Q5J5C9 76 aa7.48□□□□□ -1.21
PTCH1-204ENST00000375290 CEMP1Q6PRD7 247 aaPredicted RBP7.48□□□□□ -1.21
PTCH1-204ENST00000375290 IGHV4-30-2A0A087WSY4 118 aa7.48□□□□□ -1.21
PTCH1-204ENST00000375290 DEFB136Q30KP8 78 aa7.48□□□□□ -1.21
PTCH1-204ENST00000375290 A0A096LPF7 62 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms