RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 BORCS7Q96B45 105 aa8.71□□□□□ -1.02
PTCH1-202ENST00000375271 CAMK2N2Q96S95 79 aa8.71□□□□□ -1.02
PTCH1-202ENST00000375271 RPP21Q9H633 154 aaKnown RBP8.71□□□□□ -1.02
PTCH1-202ENST00000375271 IGLV4-69A0A075B6H9 119 aa8.7□□□□□ -1.02
PTCH1-202ENST00000375271 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
PTCH1-202ENST00000375271 MEF2BQ02080 365 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-202ENST00000375271 SMAGPQ0VAQ4 97 aa8.7□□□□□ -1.02
PTCH1-202ENST00000375271 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
PTCH1-202ENST00000375271 G3V3Q6 166 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 COX7A2LO14548 114 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 BCL2P10415 239 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 NUDT10Q8NFP7 164 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 TSKUQ8WUA8 353 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 NUDT11Q96G61 164 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 CNFNQ9BYD5 112 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
PTCH1-202ENST00000375271 APOMO95445 188 aa8.68□□□□□ -1.02
PTCH1-202ENST00000375271 C9orf116Q5BN46 136 aaPredicted RBP8.68□□□□□ -1.02
PTCH1-202ENST00000375271 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
PTCH1-202ENST00000375271 TMEM242Q9NWH2 141 aa8.68□□□□□ -1.02
PTCH1-202ENST00000375271 C7orf77A4D0Y5 90 aa8.67□□□□□ -1.02
PTCH1-202ENST00000375271 C1orf196B1AJZ1 125 aa8.67□□□□□ -1.02
PTCH1-202ENST00000375271 TRAV1-1A0A0B4J248 108 aa8.66□□□□□ -1.02
PTCH1-202ENST00000375271 HMSDA8MTL9 139 aa8.66□□□□□ -1.02
PTCH1-202ENST00000375271 FCER1GP30273 86 aa8.66□□□□□ -1.02
PTCH1-202ENST00000375271 UBE2D1P51668 147 aa8.66□□□□□ -1.02
PTCH1-202ENST00000375271 RGS21Q2M5E4 152 aa8.66□□□□□ -1.02
PTCH1-202ENST00000375271 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
PTCH1-202ENST00000375271 CDC42SE2Q9NRR3 84 aa8.65□□□□□ -1.02
PTCH1-202ENST00000375271 TRBV20OR9-2A0A075B6H5 130 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 A0A087WZ39 114 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 GATCO43716 136 aaKnown RBP8.64□□□□□ -1.03
PTCH1-202ENST00000375271 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
PTCH1-202ENST00000375271 PRR4Q16378 134 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
PTCH1-202ENST00000375271 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
PTCH1-202ENST00000375271 PRR26Q8N8Z3 221 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 NUP35Q8NFH5 326 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 C2orf48Q96LS8 159 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 BATF3Q9NR55 127 aa8.64□□□□□ -1.03
PTCH1-202ENST00000375271 TRAV13-1A0A0B4J241 112 aa8.63□□□□□ -1.03
PTCH1-202ENST00000375271 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
PTCH1-202ENST00000375271 A8MWL6 223 aa8.63□□□□□ -1.03
PTCH1-202ENST00000375271 TSHBP01222 138 aa8.63□□□□□ -1.03
PTCH1-202ENST00000375271 ESDP10768 282 aa8.63□□□□□ -1.03
PTCH1-202ENST00000375271 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
PTCH1-202ENST00000375271 SPAG11BQ08648 103 aa8.63□□□□□ -1.03
PTCH1-202ENST00000375271 LPAP08519 4548 aa8.62□□□□□ -1.03
PTCH1-202ENST00000375271 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
PTCH1-202ENST00000375271 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
PTCH1-202ENST00000375271 H0Y9J4 135 aa8.61□□□□□ -1.03
PTCH1-202ENST00000375271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-202ENST00000375271 C5orf38Q86SI9 138 aa8.61□□□□□ -1.03
PTCH1-202ENST00000375271 TMEM18Q96B42 140 aa8.61□□□□□ -1.03
PTCH1-202ENST00000375271 IMMP2LQ96T52 175 aa8.61□□□□□ -1.03
PTCH1-202ENST00000375271 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
PTCH1-202ENST00000375271 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-202ENST00000375271 RPL13AP40429 203 aaKnown RBP8.6□□□□□ -1.03
PTCH1-202ENST00000375271 UBE2BP63146 152 aa8.6□□□□□ -1.03
PTCH1-202ENST00000375271 OCC1Q8TAD7 63 aa8.6□□□□□ -1.03
PTCH1-202ENST00000375271 TRBV27A0A0K0K1C4 114 aa8.59□□□□□ -1.03
PTCH1-202ENST00000375271 K7EN84 100 aa8.59□□□□□ -1.03
PTCH1-202ENST00000375271 VCYO14598 125 aa8.59□□□□□ -1.03
PTCH1-202ENST00000375271 PPP1R17O96001 155 aa8.59□□□□□ -1.03
PTCH1-202ENST00000375271 RNASE13Q5GAN3 156 aaKnown RBP8.59□□□□□ -1.03
PTCH1-202ENST00000375271 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-202ENST00000375271 OR10D4PQ8NGN7 298 aa8.59□□□□□ -1.03
PTCH1-202ENST00000375271 NDUFA1O15239 70 aa8.58□□□□□ -1.04
PTCH1-202ENST00000375271 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
PTCH1-202ENST00000375271 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
PTCH1-202ENST00000375271 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
PTCH1-202ENST00000375271 CEBPGP53567 150 aa8.57□□□□□ -1.04
PTCH1-202ENST00000375271 TMEM191AQ9H0A3 160 aa8.57□□□□□ -1.04
PTCH1-202ENST00000375271 CSDC2Q9Y534 153 aaKnown RBP8.57□□□□□ -1.04
PTCH1-202ENST00000375271 F8WDY8 70 aa8.56□□□□□ -1.04
PTCH1-202ENST00000375271 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
PTCH1-202ENST00000375271 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
PTCH1-202ENST00000375271 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
PTCH1-202ENST00000375271 PPP1R2P9O14990 202 aa8.55□□□□□ -1.04
PTCH1-202ENST00000375271 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
PTCH1-202ENST00000375271 CT83Q5H943 113 aa8.55□□□□□ -1.04
PTCH1-202ENST00000375271 FAM231DQ6ZW35 169 aa8.55□□□□□ -1.04
PTCH1-202ENST00000375271 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
PTCH1-202ENST00000375271 HIGD1CA8MV81 97 aa8.54□□□□□ -1.04
PTCH1-202ENST00000375271 M0QXV9 152 aa8.54□□□□□ -1.04
PTCH1-202ENST00000375271 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
PTCH1-202ENST00000375271 TMEM241Q24JQ0 296 aa8.54□□□□□ -1.04
PTCH1-202ENST00000375271 Q6ZUT4 128 aa8.54□□□□□ -1.04
PTCH1-202ENST00000375271 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
PTCH1-202ENST00000375271 RAB4AP20338 218 aa8.53□□□□□ -1.04
PTCH1-202ENST00000375271 RIGQ13278 110 aa8.53□□□□□ -1.04
PTCH1-202ENST00000375271 FAM168BA1KXE4 195 aa8.52□□□□□ -1.05
PTCH1-202ENST00000375271 TMEM250H0YL14 139 aa8.52□□□□□ -1.05
PTCH1-202ENST00000375271 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
PTCH1-202ENST00000375271 TCAPO15273 167 aa8.52□□□□□ -1.05
PTCH1-202ENST00000375271 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
PTCH1-202ENST00000375271 SLC51BQ86UW2 128 aa8.51□□□□□ -1.05
PTCH1-202ENST00000375271 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
PTCH1-202ENST00000375271 IFITM10A6NMD0 228 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms