RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 IGLV5-52A0A0A0MRZ9 124 aa13.8□□□□□ -0.2
MAP1LC3A-202ENST00000374837 IGKV3OR2-268A0A0C4DH90 116 aa13.8□□□□□ -0.2
MAP1LC3A-202ENST00000374837 PRSS47A8MTI9 375 aa13.8□□□□□ -0.2
MAP1LC3A-202ENST00000374837 TCAPO15273 167 aa13.8□□□□□ -0.2
MAP1LC3A-202ENST00000374837 HLA-DQA1P01909 254 aa13.8□□□□□ -0.2
MAP1LC3A-202ENST00000374837 SVBPQ8N300 66 aa13.8□□□□□ -0.2
MAP1LC3A-202ENST00000374837 LOC389332A0A1B0GUA5 103 aa13.79□□□□□ -0.2
MAP1LC3A-202ENST00000374837 SNAPINO95295 136 aa13.79□□□□□ -0.2
MAP1LC3A-202ENST00000374837 KIAA1644Q3SXP7 199 aa13.78□□□□□ -0.2
MAP1LC3A-202ENST00000374837 GNB1LQ9BYB4 327 aa13.78□□□□□ -0.2
MAP1LC3A-202ENST00000374837 MAP1LC3AQ9H492 121 aa13.78□□□□□ -0.2
MAP1LC3A-202ENST00000374837 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
MAP1LC3A-202ENST00000374837 UBE2D4Q9Y2X8 147 aa13.78□□□□□ -0.2
MAP1LC3A-202ENST00000374837 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.77□□□□□ -0.21
MAP1LC3A-202ENST00000374837 GCSHP23434 173 aa13.77□□□□□ -0.21
MAP1LC3A-202ENST00000374837 KRTAP10-1P60331 282 aa13.77□□□□□ -0.21
MAP1LC3A-202ENST00000374837 DGAT2L7PQ6IED9 249 aa13.77□□□□□ -0.21
MAP1LC3A-202ENST00000374837 TMEM18Q96B42 140 aa13.77□□□□□ -0.21
MAP1LC3A-202ENST00000374837 USP17L23D6RBM5 183 aa13.76□□□□□ -0.21
MAP1LC3A-202ENST00000374837 SMAGPQ0VAQ4 97 aa13.76□□□□□ -0.21
MAP1LC3A-202ENST00000374837 SLC7A5P1Q8MH63 180 aa13.76□□□□□ -0.21
MAP1LC3A-202ENST00000374837 ZNF664Q8N3J9 261 aa13.76□□□□□ -0.21
MAP1LC3A-202ENST00000374837 CSDC2Q9Y534 153 aaKnown RBP13.76□□□□□ -0.21
MAP1LC3A-202ENST00000374837 RAB5AP20339 215 aa13.75□□□□□ -0.21
MAP1LC3A-202ENST00000374837 RPL39P62891 51 aaKnown RBP13.75□□□□□ -0.21
MAP1LC3A-202ENST00000374837 COX19Q49B96 90 aa13.75□□□□□ -0.21
MAP1LC3A-202ENST00000374837 TIMM21Q9BVV7 248 aa13.75□□□□□ -0.21
MAP1LC3A-202ENST00000374837 GAGE12HA6NDE8 117 aa13.74□□□□□ -0.21
MAP1LC3A-202ENST00000374837 C14orf177Q52M58 125 aa13.74□□□□□ -0.21
MAP1LC3A-202ENST00000374837 Q8N8P6 123 aa13.74□□□□□ -0.21
MAP1LC3A-202ENST00000374837 CHCHD10Q8WYQ3 142 aaPredicted RBP13.74□□□□□ -0.21
MAP1LC3A-202ENST00000374837 TGIF2-C20orf24A0A0A6YYL0 155 aa13.73□□□□□ -0.21
MAP1LC3A-202ENST00000374837 LINC00959A0A1B0GUT2 108 aa13.73□□□□□ -0.21
MAP1LC3A-202ENST00000374837 CDK2AP2O75956 126 aa13.73□□□□□ -0.21
MAP1LC3A-202ENST00000374837 PRSS1P07477 247 aa13.71□□□□□ -0.21
MAP1LC3A-202ENST00000374837 RNASE13Q5GAN3 156 aaKnown RBP13.71□□□□□ -0.21
MAP1LC3A-202ENST00000374837 MT-ND6P03923 174 aa13.7□□□□□ -0.22
MAP1LC3A-202ENST00000374837 FABP9Q0Z7S8 132 aa13.7□□□□□ -0.22
MAP1LC3A-202ENST00000374837 Q6ZUT4 128 aa13.7□□□□□ -0.22
MAP1LC3A-202ENST00000374837 FAM104AQ969W3 186 aa13.7□□□□□ -0.22
MAP1LC3A-202ENST00000374837 MRPL18Q9H0U6 180 aaKnown RBP13.7□□□□□ -0.22
MAP1LC3A-202ENST00000374837 SPANXA1Q9NS26 97 aa13.7□□□□□ -0.22
MAP1LC3A-202ENST00000374837 IFI27P40305 119 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3A-202ENST00000374837 SS18Q15532 418 aa13.69□□□□□ -0.22
MAP1LC3A-202ENST00000374837 ALKBH7Q9BT30 221 aaPredicted RBP13.69□□□□□ -0.22
MAP1LC3A-202ENST00000374837 NXT2Q9NPJ8 142 aaKnown RBP13.69□□□□□ -0.22
MAP1LC3A-202ENST00000374837 CCL25O15444 150 aa13.68□□□□□ -0.22
MAP1LC3A-202ENST00000374837 XCL1P47992 114 aa13.68□□□□□ -0.22
MAP1LC3A-202ENST00000374837 FOXI1Q12951 378 aa13.68□□□□□ -0.22
MAP1LC3A-202ENST00000374837 OPRPNQ99935 248 aaPredicted RBP13.68□□□□□ -0.22
MAP1LC3A-202ENST00000374837 APOBP04114 4563 aaKnown RBP13.67□□□□□ -0.22
MAP1LC3A-202ENST00000374837 K7EMI3 77 aa13.66□□□□□ -0.22
MAP1LC3A-202ENST00000374837 MRPS36P82909 103 aaKnown RBP13.66□□□□□ -0.22
MAP1LC3A-202ENST00000374837 LINC01620Q4KN68 170 aa13.66□□□□□ -0.22
MAP1LC3A-202ENST00000374837 ORMDL2Q53FV1 153 aa13.66□□□□□ -0.22
MAP1LC3A-202ENST00000374837 TRAV13-1A0A0B4J241 112 aa13.65□□□□□ -0.22
MAP1LC3A-202ENST00000374837 YPEL4Q96NS1 127 aa13.65□□□□□ -0.22
MAP1LC3A-202ENST00000374837 PYGO1Q9Y3Y4 419 aa13.65□□□□□ -0.22
MAP1LC3A-202ENST00000374837 TRAPPC1Q9Y5R8 145 aa13.65□□□□□ -0.22
MAP1LC3A-202ENST00000374837 hDV102S1A0JD36 115 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 C1orf196B1AJZ1 125 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 XGP55808 180 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 CD164L2Q6UWJ8 174 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 C2orf66Q6UXQ4 117 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 C15orf56Q8N910 161 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 PRSS3P2Q8NHM4 247 aa13.64□□□□□ -0.23
MAP1LC3A-202ENST00000374837 FAM30AQ9NZY2 134 aa13.63□□□□□ -0.23
MAP1LC3A-202ENST00000374837 CYSLTR1Q9Y271 337 aa13.63□□□□□ -0.23
MAP1LC3A-202ENST00000374837 HSPG2P98160 4391 aa13.62□□□□□ -0.23
MAP1LC3A-202ENST00000374837 IGLV4-3A0A075B6K6 122 aa13.61□□□□□ -0.23
MAP1LC3A-202ENST00000374837 SLPIP03973 132 aa13.6□□□□□ -0.23
MAP1LC3A-202ENST00000374837 CBLN2Q8IUK8 224 aa13.6□□□□□ -0.23
MAP1LC3A-202ENST00000374837 SMCO4Q9NRQ5 59 aa13.6□□□□□ -0.23
MAP1LC3A-202ENST00000374837 AP5S1Q9NUS5 200 aa13.6□□□□□ -0.23
MAP1LC3A-202ENST00000374837 DNAH8Q96JB1 4490 aa13.6□□□□□ -0.23
MAP1LC3A-202ENST00000374837 LINC01546A6NGU7 62 aa13.59□□□□□ -0.23
MAP1LC3A-202ENST00000374837 CNBPP62633 177 aaKnown RBP13.59□□□□□ -0.23
MAP1LC3A-202ENST00000374837 HIGD2BQ4VC39 106 aa13.59□□□□□ -0.23
MAP1LC3A-202ENST00000374837 IFITM10A6NMD0 228 aa13.58□□□□□ -0.24
MAP1LC3A-202ENST00000374837 G0S2P27469 103 aa13.58□□□□□ -0.24
MAP1LC3A-202ENST00000374837 C9orf163Q8N9P6 203 aa13.58□□□□□ -0.24
MAP1LC3A-202ENST00000374837 TMEM141Q96I45 108 aa13.58□□□□□ -0.24
MAP1LC3A-202ENST00000374837 GVQW2A0A096LPI5 108 aaPredicted RBP13.57□□□□□ -0.24
MAP1LC3A-202ENST00000374837 IGHV1-58A0A0C4DH39 117 aa13.57□□□□□ -0.24
MAP1LC3A-202ENST00000374837 IGIPA6NJ69 53 aa13.57□□□□□ -0.24
MAP1LC3A-202ENST00000374837 HAMPP81172 84 aa13.57□□□□□ -0.24
MAP1LC3A-202ENST00000374837 Q6ZSA8 131 aa13.57□□□□□ -0.24
MAP1LC3A-202ENST00000374837 COX7A2LO14548 114 aa13.56□□□□□ -0.24
MAP1LC3A-202ENST00000374837 FA2HQ7L5A8 372 aa13.56□□□□□ -0.24
MAP1LC3A-202ENST00000374837 C5orf38Q86SI9 138 aa13.56□□□□□ -0.24
MAP1LC3A-202ENST00000374837 TOMM6Q96B49 74 aa13.56□□□□□ -0.24
MAP1LC3A-202ENST00000374837 ZC2HC1BQ5TFG8 222 aa13.55□□□□□ -0.24
MAP1LC3A-202ENST00000374837 C18orf32Q8TCD1 76 aa13.55□□□□□ -0.24
MAP1LC3A-202ENST00000374837 NPSP0C0P6 89 aa13.54□□□□□ -0.24
MAP1LC3A-202ENST00000374837 MALP21145 153 aa13.54□□□□□ -0.24
MAP1LC3A-202ENST00000374837 TEX43Q6ZNM6 134 aa13.54□□□□□ -0.24
MAP1LC3A-202ENST00000374837 AMELXQ99217 191 aa13.54□□□□□ -0.24
MAP1LC3A-202ENST00000374837 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
MAP1LC3A-202ENST00000374837 Q6ZN92 141 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms