RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 PRM2P04554 102 aa11.6□□□□□ -0.55
PABPC4-201ENST00000372856 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
PABPC4-201ENST00000372856 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
PABPC4-201ENST00000372856 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
PABPC4-201ENST00000372856 TRACP01848 142 aa11.6□□□□□ -0.55
PABPC4-201ENST00000372856 WNK1Q9H4A3 2382 aa11.59□□□□□ -0.55
PABPC4-201ENST00000372856 IMUPQ9GZP8 106 aa11.59□□□□□ -0.55
PABPC4-201ENST00000372856 OXTP01178 125 aa11.58□□□□□ -0.56
PABPC4-201ENST00000372856 KNCNA6PVL3 124 aa11.58□□□□□ -0.56
PABPC4-201ENST00000372856 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
PABPC4-201ENST00000372856 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
PABPC4-201ENST00000372856 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
PABPC4-201ENST00000372856 TRAV13-1A0A0B4J241 112 aa11.57□□□□□ -0.56
PABPC4-201ENST00000372856 Q9UF83 564 aa11.57□□□□□ -0.56
PABPC4-201ENST00000372856 B4DSR2 109 aa11.57□□□□□ -0.56
PABPC4-201ENST00000372856 CD28P10747 220 aa11.57□□□□□ -0.56
PABPC4-201ENST00000372856 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
PABPC4-201ENST00000372856 LINC00643Q86TS7 51 aa11.57□□□□□ -0.56
PABPC4-201ENST00000372856 A0A0J9YXY3 114 aa11.56□□□□□ -0.56
PABPC4-201ENST00000372856 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
PABPC4-201ENST00000372856 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
PABPC4-201ENST00000372856 LST1O00453 97 aa11.55□□□□□ -0.56
PABPC4-201ENST00000372856 RPS28P62857 69 aaKnown RBP11.55□□□□□ -0.56
PABPC4-201ENST00000372856 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
PABPC4-201ENST00000372856 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
PABPC4-201ENST00000372856 FAM104AQ969W3 186 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 CRYGAP11844 174 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 TIMM21Q9BVV7 248 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 ZNF462Q96JM2 2506 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 A8MZ25 164 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 IGSF10Q6WRI0 2623 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 DAND5Q8N907 189 aa11.54□□□□□ -0.56
PABPC4-201ENST00000372856 LINC01600Q96MT4 127 aa11.53□□□□□ -0.56
PABPC4-201ENST00000372856 PRORYQ9H606 182 aa11.53□□□□□ -0.56
PABPC4-201ENST00000372856 DEFB121Q5J5C9 76 aa11.53□□□□□ -0.56
PABPC4-201ENST00000372856 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
PABPC4-201ENST00000372856 DEFB131AP59861 70 aa11.52□□□□□ -0.56
PABPC4-201ENST00000372856 SDIM1Q6ZPB5 146 aa11.52□□□□□ -0.56
PABPC4-201ENST00000372856 DEFB136Q30KP8 78 aa11.52□□□□□ -0.57
PABPC4-201ENST00000372856 HIST2H2BDQ6DRA6 164 aa11.52□□□□□ -0.57
PABPC4-201ENST00000372856 Q6ZSN1 163 aa11.52□□□□□ -0.57
PABPC4-201ENST00000372856 NAV2Q8IVL1 2488 aa11.51□□□□□ -0.57
PABPC4-201ENST00000372856 ACYP1P07311 99 aa11.51□□□□□ -0.57
PABPC4-201ENST00000372856 EPG5Q9HCE0 2579 aa11.51□□□□□ -0.57
PABPC4-201ENST00000372856 MRPS36P82909 103 aaKnown RBP11.5□□□□□ -0.57
PABPC4-201ENST00000372856 C18orf65Q6ZTR6 163 aa11.5□□□□□ -0.57
PABPC4-201ENST00000372856 LITAFQ99732 161 aa11.5□□□□□ -0.57
PABPC4-201ENST00000372856 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.5□□□□□ -0.57
PABPC4-201ENST00000372856 IGHV3-38A0A0C4DH36 116 aa11.5□□□□□ -0.57
PABPC4-201ENST00000372856 IGKV2-29A2NJV5 120 aaPredicted RBP11.5□□□□□ -0.57
PABPC4-201ENST00000372856 PEMTQ9UBM1 199 aa11.5□□□□□ -0.57
PABPC4-201ENST00000372856 FBN2P35556 2912 aa11.5□□□□□ -0.57
PABPC4-201ENST00000372856 ANKRD17O75179 2603 aaKnown RBP11.5□□□□□ -0.57
PABPC4-201ENST00000372856 SLURP1P55000 103 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 DAZ2Q13117 558 aaKnown RBP11.49□□□□□ -0.57
PABPC4-201ENST00000372856 DAZ4Q86SG3 579 aaKnown RBP11.49□□□□□ -0.57
PABPC4-201ENST00000372856 DAZ3Q9NR90 486 aaKnown RBP11.49□□□□□ -0.57
PABPC4-201ENST00000372856 NDUFA12Q9UI09 145 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 PYGO1Q9Y3Y4 419 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 Q5XG85 94 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 ATOX1O00244 68 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 ATP5G1P05496 136 aa11.49□□□□□ -0.57
PABPC4-201ENST00000372856 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
PABPC4-201ENST00000372856 IGHV1-58A0A0C4DH39 117 aa11.48□□□□□ -0.57
PABPC4-201ENST00000372856 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
PABPC4-201ENST00000372856 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
PABPC4-201ENST00000372856 RBMY1DP0C7P1 496 aaKnown RBP11.48□□□□□ -0.57
PABPC4-201ENST00000372856 C1orf43Q9BWL3 253 aa11.48□□□□□ -0.57
PABPC4-201ENST00000372856 TMEM89A2RUT3 159 aa11.48□□□□□ -0.57
PABPC4-201ENST00000372856 A0A087WVE0 104 aa11.47□□□□□ -0.57
PABPC4-201ENST00000372856 A0A0U1RRA0 63 aa11.47□□□□□ -0.57
PABPC4-201ENST00000372856 TMEM258P61165 79 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 CHCHD7Q9BUK0 85 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 NF1P21359 2839 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 LINC01356Q8N9X3 169 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 VSIG2Q96IQ7 327 aa11.46□□□□□ -0.57
PABPC4-201ENST00000372856 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.58
PABPC4-201ENST00000372856 LINC00467Q9BRT7 94 aa11.46□□□□□ -0.58
PABPC4-201ENST00000372856 PKIGQ9Y2B9 76 aa11.46□□□□□ -0.58
PABPC4-201ENST00000372856 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.58
PABPC4-201ENST00000372856 TMEM61Q8N0U2 210 aa11.45□□□□□ -0.58
PABPC4-201ENST00000372856 CITED2Q99967 270 aaPredicted RBP11.45□□□□□ -0.58
PABPC4-201ENST00000372856 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
PABPC4-201ENST00000372856 TIRAPP58753 221 aa11.44□□□□□ -0.58
PABPC4-201ENST00000372856 TINCRA0A1B0GVN0 87 aa11.44□□□□□ -0.58
PABPC4-201ENST00000372856 MTORP42345 2549 aa11.43□□□□□ -0.58
PABPC4-201ENST00000372856 JMJD1CQ15652 2540 aa11.43□□□□□ -0.58
PABPC4-201ENST00000372856 ZNF415Q09FC8 603 aa11.43□□□□□ -0.58
PABPC4-201ENST00000372856 NIPBLQ6KC79 2804 aaeCLIP11.43□□□□□ -0.581e-6■■■■□ 23.7
PABPC4-201ENST00000372856 BAALC-AS2P0C853 105 aa11.43□□□□□ -0.58
PABPC4-201ENST00000372856 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
PABPC4-201ENST00000372856 MIAQ16674 131 aa11.43□□□□□ -0.58
PABPC4-201ENST00000372856 TEX15Q9BXT5 2789 aa11.43□□□□□ -0.58
PABPC4-201ENST00000372856 J3QLI3 93 aa11.42□□□□□ -0.58
PABPC4-201ENST00000372856 MRAPQ8TCY5 172 aa11.42□□□□□ -0.58
PABPC4-201ENST00000372856 CDKN2A-AS1Q9UH64 79 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms