RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 FAM104AQ969W3 186 aa18.33■□□□□ 0.52
ATPAF1-202ENST00000371937 ICOSQ9Y6W8 199 aa18.33■□□□□ 0.52
ATPAF1-202ENST00000371937 STPG4Q8N801 248 aa18.32■□□□□ 0.52
ATPAF1-202ENST00000371937 AMMECR1LQ6DCA0 310 aa18.31■□□□□ 0.52
ATPAF1-202ENST00000371937 H3BNG1 76 aa18.3■□□□□ 0.52
ATPAF1-202ENST00000371937 IGLC3P0DOY3 106 aa18.3■□□□□ 0.52
ATPAF1-202ENST00000371937 IGLV4-69A0A075B6H9 119 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 A0A096LPF7 62 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 DDTP30046 118 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 NANOS2P60321 138 aaKnown RBP18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 Q6ZUT4 128 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 TMEM101Q96IK0 257 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 MIEN1Q9BRT3 115 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 CHCHD5Q9BSY4 110 aa18.29■□□□□ 0.52
ATPAF1-202ENST00000371937 ZNF25P17030 456 aaPredicted RBP18.28■□□□□ 0.52
ATPAF1-202ENST00000371937 OR5A1Q8NGJ0 315 aa18.28■□□□□ 0.52
ATPAF1-202ENST00000371937 C2orf88Q9BSF0 95 aa18.28■□□□□ 0.52
ATPAF1-202ENST00000371937 B9D2Q9BPU9 175 aa18.28■□□□□ 0.52
ATPAF1-202ENST00000371937 ANKRD39Q53RE8 183 aa18.27■□□□□ 0.52
ATPAF1-202ENST00000371937 C14orf144Q96I85 54 aa18.27■□□□□ 0.52
ATPAF1-202ENST00000371937 UQCR10Q9UDW1 63 aa18.27■□□□□ 0.52
ATPAF1-202ENST00000371937 RNASE13Q5GAN3 156 aaKnown RBP18.26■□□□□ 0.51
ATPAF1-202ENST00000371937 NFE4Q86UQ8 179 aa18.26■□□□□ 0.51
ATPAF1-202ENST00000371937 C11orf86A6NJI1 115 aa18.25■□□□□ 0.51
ATPAF1-202ENST00000371937 GAGE6Q13070 117 aa18.25■□□□□ 0.51
ATPAF1-202ENST00000371937 DEFB131BA0A096LNP1 70 aa18.24■□□□□ 0.51
ATPAF1-202ENST00000371937 CDC42SE2Q9NRR3 84 aa18.24■□□□□ 0.51
ATPAF1-202ENST00000371937 CHAC1Q9BUX1 264 aa18.22■□□□□ 0.51
ATPAF1-202ENST00000371937 A0A0J9YXV3 536 aa18.21■□□□□ 0.51
ATPAF1-202ENST00000371937 COX8AP10176 69 aa18.21■□□□□ 0.51
ATPAF1-202ENST00000371937 TCTAP57738 103 aa18.2■□□□□ 0.5
ATPAF1-202ENST00000371937 SLC25A34Q6PIV7 304 aa18.2■□□□□ 0.5
ATPAF1-202ENST00000371937 DNHD1Q96M86 4753 aa18.19■□□□□ 0.5
ATPAF1-202ENST00000371937 TRAV10A0A0B4J240 114 aa18.19■□□□□ 0.5
ATPAF1-202ENST00000371937 LINC00587B1AMM8 73 aa18.19■□□□□ 0.5
ATPAF1-202ENST00000371937 NMUP48645 174 aa18.19■□□□□ 0.5
ATPAF1-202ENST00000371937 UBE2D1P51668 147 aa18.19■□□□□ 0.5
ATPAF1-202ENST00000371937 TMEM170BQ5T4T1 132 aa18.19■□□□□ 0.5
ATPAF1-202ENST00000371937 TINCRA0A1B0GVN0 87 aa18.18■□□□□ 0.5
ATPAF1-202ENST00000371937 TMEM262E9PQX1 116 aa18.18■□□□□ 0.5
ATPAF1-202ENST00000371937 HUWE1Q7Z6Z7 4374 aaKnown RBP18.17■□□□□ 0.5
ATPAF1-202ENST00000371937 A0A1B0GUV1 79 aa18.17■□□□□ 0.5
ATPAF1-202ENST00000371937 HERVK_113P61574 105 aa18.17■□□□□ 0.5
ATPAF1-202ENST00000371937 LELP1Q5T871 98 aa18.17■□□□□ 0.5
ATPAF1-202ENST00000371937 TIRAPP58753 221 aa18.16■□□□□ 0.5
ATPAF1-202ENST00000371937 IGKV2D-26A0A0A0MRZ7 120 aa18.15■□□□□ 0.5
ATPAF1-202ENST00000371937 SEC11AP67812 179 aa18.15■□□□□ 0.5
ATPAF1-202ENST00000371937 IGLV4-60A0A075B6I1 120 aa18.14■□□□□ 0.5
ATPAF1-202ENST00000371937 E9PLD3 99 aa18.14■□□□□ 0.5
ATPAF1-202ENST00000371937 NHLRC4P0CG21 123 aaPredicted RBP18.14■□□□□ 0.5
ATPAF1-202ENST00000371937 LYPD5Q6UWN5 251 aa18.14■□□□□ 0.5
ATPAF1-202ENST00000371937 ZNF22P17026 224 aaPredicted RBP18.14■□□□□ 0.49
ATPAF1-202ENST00000371937 GEMIN7Q9H840 131 aaKnown RBP18.14■□□□□ 0.49
ATPAF1-202ENST00000371937 HNRNPA3P51991 378 aaKnown RBP18.13■□□□□ 0.49
ATPAF1-202ENST00000371937 FAM19A3Q7Z5A8 133 aa18.13■□□□□ 0.49
ATPAF1-202ENST00000371937 BOD1L2Q8IYS8 172 aa18.13■□□□□ 0.49
ATPAF1-202ENST00000371937 DLEU1O43261 78 aa18.12■□□□□ 0.49
ATPAF1-202ENST00000371937 RBX1P62877 108 aa18.12■□□□□ 0.49
ATPAF1-202ENST00000371937 TRAV13-1A0A0B4J241 112 aa18.12■□□□□ 0.49
ATPAF1-202ENST00000371937 MPV17L2Q567V2 206 aa18.12■□□□□ 0.49
ATPAF1-202ENST00000371937 DEFA6Q01524 100 aa18.11■□□□□ 0.49
ATPAF1-202ENST00000371937 PCP2Q8IVA1 136 aa18.11■□□□□ 0.49
ATPAF1-202ENST00000371937 HERVK_113P63121 156 aa18.1■□□□□ 0.49
ATPAF1-202ENST00000371937 TMEM223A0PJW6 202 aa18.09■□□□□ 0.49
ATPAF1-202ENST00000371937 LINC00242Q5T6M2 205 aa18.09■□□□□ 0.49
ATPAF1-202ENST00000371937 TRAV8-6A0A0B4J262 113 aa18.08■□□□□ 0.48
ATPAF1-202ENST00000371937 LINC00469Q8N7U9 141 aa18.08■□□□□ 0.48
ATPAF1-202ENST00000371937 C15orf53Q8NAA6 179 aa18.08■□□□□ 0.48
ATPAF1-202ENST00000371937 TP73-AS1Q9UF72 201 aa18.07■□□□□ 0.48
ATPAF1-202ENST00000371937 MRPS16Q9Y3D3 137 aaKnown RBP18.07■□□□□ 0.48
ATPAF1-202ENST00000371937 DNAH9Q9NYC9 4486 aa18.07■□□□□ 0.48
ATPAF1-202ENST00000371937 IGLV5-45A0A087WSX0 123 aa18.07■□□□□ 0.48
ATPAF1-202ENST00000371937 H3BRM9 83 aa18.06■□□□□ 0.48
ATPAF1-202ENST00000371937 CTAG1AP78358 180 aa18.05■□□□□ 0.48
ATPAF1-202ENST00000371937 COL7A1Q02388 2944 aa18.04■□□□□ 0.48
ATPAF1-202ENST00000371937 SIVA1O15304 175 aa18.04■□□□□ 0.48
ATPAF1-202ENST00000371937 COX6A2Q02221 97 aa18.04■□□□□ 0.48
ATPAF1-202ENST00000371937 TTTY13Q9BZ97 58 aa18.04■□□□□ 0.48
ATPAF1-202ENST00000371937 CDKN2A-AS1Q9UH64 79 aa18.04■□□□□ 0.48
ATPAF1-202ENST00000371937 IGKV3OR2-268A0A0C4DH90 116 aa18.03■□□□□ 0.48
ATPAF1-202ENST00000371937 LEPROTO15243 131 aa18.02■□□□□ 0.47
ATPAF1-202ENST00000371937 ESRGQ1W209 222 aa18.02■□□□□ 0.47
ATPAF1-202ENST00000371937 PLEKHB2Q96CS7 222 aa18.01■□□□□ 0.47
ATPAF1-202ENST00000371937 STAB2Q8WWQ8 2551 aa18.01■□□□□ 0.47
ATPAF1-202ENST00000371937 LINC00959A0A1B0GUT2 108 aa18■□□□□ 0.47
ATPAF1-202ENST00000371937 ANGP03950 147 aaKnown RBP18■□□□□ 0.47
ATPAF1-202ENST00000371937 C2orf91Q6ZV80 131 aa18■□□□□ 0.47
ATPAF1-202ENST00000371937 MAPKAPK5-AS1Q8N8E1 139 aa18■□□□□ 0.47
ATPAF1-202ENST00000371937 MYMXA0A1B0GTQ4 84 aa18■□□□□ 0.47
ATPAF1-202ENST00000371937 J3QQQ9 107 aa18■□□□□ 0.47
ATPAF1-202ENST00000371937 CCL25O15444 150 aa18■□□□□ 0.47
ATPAF1-202ENST00000371937 IGHV1-58A0A0C4DH39 117 aa17.99■□□□□ 0.47
ATPAF1-202ENST00000371937 LGALS3P17931 250 aaKnown RBP17.98■□□□□ 0.47
ATPAF1-202ENST00000371937 SS18Q15532 418 aa17.98■□□□□ 0.47
ATPAF1-202ENST00000371937 LINC00269Q8N2A0 174 aa17.98■□□□□ 0.47
ATPAF1-202ENST00000371937 MEGF8Q7Z7M0 2845 aa17.98■□□□□ 0.47
ATPAF1-202ENST00000371937 IGHV3-64A0A075B6Q5 118 aa17.98■□□□□ 0.47
ATPAF1-202ENST00000371937 SPINK8P0C7L1 97 aa17.98■□□□□ 0.47
ATPAF1-202ENST00000371937 ZNF815PA8K554 130 aa17.97■□□□□ 0.47
ATPAF1-202ENST00000371937 IGHV3-30-3P0DP02 117 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms