RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 SYNJ2BPP57105 145 aa10.77□□□□□ -0.69
PRKN-204ENST00000366896 UBE2WQ96B02 151 aa10.77□□□□□ -0.69
PRKN-204ENST00000366896 CUBNO60494 3623 aa10.77□□□□□ -0.69
PRKN-204ENST00000366896 C15orf53Q8NAA6 179 aa10.77□□□□□ -0.69
PRKN-204ENST00000366896 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
PRKN-204ENST00000366896 PIK3CD-AS1Q5SR53 167 aa10.76□□□□□ -0.69
PRKN-204ENST00000366896 ZNF702PQ9H963 129 aa10.76□□□□□ -0.69
PRKN-204ENST00000366896 PYGO1Q9Y3Y4 419 aa10.76□□□□□ -0.69
PRKN-204ENST00000366896 A8MTW9 85 aa10.75□□□□□ -0.69
PRKN-204ENST00000366896 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
PRKN-204ENST00000366896 LITAFQ99732 161 aa10.75□□□□□ -0.69
PRKN-204ENST00000366896 IGLV4-3A0A075B6K6 122 aa10.74□□□□□ -0.69
PRKN-204ENST00000366896 UBE2E2Q96LR5 201 aa10.74□□□□□ -0.69
PRKN-204ENST00000366896 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
PRKN-204ENST00000366896 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
PRKN-204ENST00000366896 H7C423 109 aa10.73□□□□□ -0.69
PRKN-204ENST00000366896 RBMY1A1P0DJD3 496 aaKnown RBP10.73□□□□□ -0.69
PRKN-204ENST00000366896 RBMY1CP0DJD4 496 aa10.73□□□□□ -0.69
PRKN-204ENST00000366896 RBMY1FQ15415 496 aaKnown RBP10.73□□□□□ -0.69
PRKN-204ENST00000366896 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
PRKN-204ENST00000366896 Q8N2B8 174 aa10.73□□□□□ -0.69
PRKN-204ENST00000366896 ICOSQ9Y6W8 199 aa10.73□□□□□ -0.69
PRKN-204ENST00000366896 MAST4O15021 2626 aa10.73□□□□□ -0.69
PRKN-204ENST00000366896 H3BT86 120 aa10.73□□□□□ -0.69
PRKN-204ENST00000366896 TIMM21Q9BVV7 248 aa10.72□□□□□ -0.69
PRKN-204ENST00000366896 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
PRKN-204ENST00000366896 SORL1Q92673 2214 aa10.71□□□□□ -0.69
PRKN-204ENST00000366896 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
PRKN-204ENST00000366896 Q6ZSV7 163 aa10.71□□□□□ -0.69
PRKN-204ENST00000366896 SPANXDQ9BXN6 97 aa10.71□□□□□ -0.69
PRKN-204ENST00000366896 SPANXCQ9NY87 97 aa10.71□□□□□ -0.69
PRKN-204ENST00000366896 IGHV3-73A0A0B4J1V6 119 aa10.71□□□□□ -0.7
PRKN-204ENST00000366896 ADARB2-AS1A8MUL3 147 aa10.71□□□□□ -0.7
PRKN-204ENST00000366896 SPXQ9BT56 116 aa10.71□□□□□ -0.7
PRKN-204ENST00000366896 FAM240AA0A1B0GVK7 77 aa10.7□□□□□ -0.7
PRKN-204ENST00000366896 KNCNA6PVL3 124 aa10.7□□□□□ -0.7
PRKN-204ENST00000366896 HTN1P15515 57 aa10.7□□□□□ -0.7
PRKN-204ENST00000366896 FAM110AQ9BQ89 295 aa10.7□□□□□ -0.7
PRKN-204ENST00000366896 PRM2P04554 102 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 PRSS2P07478 247 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 COX6CP09669 75 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 PROK1P58294 105 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 MRPS36P82909 103 aaKnown RBP10.69□□□□□ -0.7
PRKN-204ENST00000366896 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 ADAMTSL4-AS1Q5T5F5 129 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 FAM104AQ969W3 186 aa10.69□□□□□ -0.7
PRKN-204ENST00000366896 C18orf65Q6ZTR6 163 aa10.68□□□□□ -0.7
PRKN-204ENST00000366896 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
PRKN-204ENST00000366896 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
PRKN-204ENST00000366896 MIAQ16674 131 aa10.68□□□□□ -0.7
PRKN-204ENST00000366896 DEFB136Q30KP8 78 aa10.68□□□□□ -0.7
PRKN-204ENST00000366896 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
PRKN-204ENST00000366896 LST1O00453 97 aa10.67□□□□□ -0.7
PRKN-204ENST00000366896 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
PRKN-204ENST00000366896 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
PRKN-204ENST00000366896 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
PRKN-204ENST00000366896 CD28P10747 220 aa10.66□□□□□ -0.7
PRKN-204ENST00000366896 SLURP1P55000 103 aa10.66□□□□□ -0.7
PRKN-204ENST00000366896 C16orf95Q9H693 158 aa10.66□□□□□ -0.7
PRKN-204ENST00000366896 Q9UF83 564 aa10.66□□□□□ -0.7
PRKN-204ENST00000366896 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
PRKN-204ENST00000366896 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
PRKN-204ENST00000366896 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
PRKN-204ENST00000366896 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
PRKN-204ENST00000366896 SMIM20Q8N5G0 67 aa10.66□□□□□ -0.7
PRKN-204ENST00000366896 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.7
PRKN-204ENST00000366896 DUX3Q96PT4 197 aa10.65□□□□□ -0.7
PRKN-204ENST00000366896 NF1P21359 2839 aa10.65□□□□□ -0.7
PRKN-204ENST00000366896 TRBV7-7A0A0K0K1E9 115 aa10.65□□□□□ -0.7
PRKN-204ENST00000366896 NDUFA7O95182 113 aa10.65□□□□□ -0.7
PRKN-204ENST00000366896 DEFB131AP59861 70 aa10.65□□□□□ -0.7
PRKN-204ENST00000366896 RNASE13Q5GAN3 156 aaKnown RBP10.64□□□□□ -0.71
PRKN-204ENST00000366896 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 TNFRSF18Q9Y5U5 241 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 HERV-K104P63124 156 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 MEIG1Q5JSS6 88 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 DNAJC30Q96LL9 226 aa10.64□□□□□ -0.71
PRKN-204ENST00000366896 TINCRA0A1B0GVN0 87 aa10.63□□□□□ -0.71
PRKN-204ENST00000366896 Q6ZSN1 163 aa10.63□□□□□ -0.71
PRKN-204ENST00000366896 NPC2P61916 151 aa10.63□□□□□ -0.71
PRKN-204ENST00000366896 HIST2H2BDQ6DRA6 164 aa10.63□□□□□ -0.71
PRKN-204ENST00000366896 SHISA2Q6UWI4 295 aa10.62□□□□□ -0.71
PRKN-204ENST00000366896 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
PRKN-204ENST00000366896 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
PRKN-204ENST00000366896 A8MZ25 164 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 TIMM17BO60830 172 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 CHCHD5Q9BSY4 110 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 C2CD3Q4AC94 2353 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 UBE2D4Q9Y2X8 147 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 NACAE9PAV3 2078 aa10.61□□□□□ -0.71
PRKN-204ENST00000366896 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
PRKN-204ENST00000366896 NIPBLQ6KC79 2804 aaeCLIP10.6□□□□□ -0.71
PRKN-204ENST00000366896 C11orf72Q8NBR9 251 aa10.59□□□□□ -0.71
PRKN-204ENST00000366896 TMEM101Q96IK0 257 aa10.59□□□□□ -0.71
PRKN-204ENST00000366896 C4orf3Q8WVX3 66 aa10.59□□□□□ -0.71
PRKN-204ENST00000366896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
PRKN-204ENST00000366896 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms