RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 FAM110AQ9BQ89 295 aa16.26■□□□□ 0.19
LDB1-201ENST00000361198 MRPS36P82909 103 aaKnown RBP16.25■□□□□ 0.19
LDB1-201ENST00000361198 NSD1Q96L73 2696 aaPredicted RBP16.25■□□□□ 0.19
LDB1-201ENST00000361198 C1QTNF4Q9BXJ3 329 aa16.25■□□□□ 0.19
LDB1-201ENST00000361198 RPL35AP18077 110 aaKnown RBP16.24■□□□□ 0.19
LDB1-201ENST00000361198 TMEM263Q8WUH6 116 aaKnown RBP16.24■□□□□ 0.19
LDB1-201ENST00000361198 A4D1N5 150 aa16.23■□□□□ 0.19
LDB1-201ENST00000361198 INAFM1C9JVW0 142 aa16.23■□□□□ 0.19
LDB1-201ENST00000361198 TCL1BO95988 128 aa16.23■□□□□ 0.19
LDB1-201ENST00000361198 FOXI1Q12951 378 aa16.23■□□□□ 0.19
LDB1-201ENST00000361198 IGHV3-38A0A0C4DH36 116 aa16.22■□□□□ 0.19
LDB1-201ENST00000361198 CEMP1Q6PRD7 247 aaPredicted RBP16.22■□□□□ 0.19
LDB1-201ENST00000361198 Q6ZTI0 123 aa16.22■□□□□ 0.19
LDB1-201ENST00000361198 DNAJC30Q96LL9 226 aa16.22■□□□□ 0.19
LDB1-201ENST00000361198 CHCHD7Q9BUK0 85 aa16.22■□□□□ 0.19
LDB1-201ENST00000361198 GTSF1LQ9H1H1 148 aa16.22■□□□□ 0.19
LDB1-201ENST00000361198 SCGB1A1P11684 91 aa16.22■□□□□ 0.19
LDB1-201ENST00000361198 IGHV3-64A0A075B6Q5 118 aa16.21■□□□□ 0.19
LDB1-201ENST00000361198 SBSPONQ8IVN8 264 aa16.21■□□□□ 0.19
LDB1-201ENST00000361198 A0A0B4J2C4 111 aa16.21■□□□□ 0.19
LDB1-201ENST00000361198 EIF4EBP3O60516 100 aaPredicted RBP16.21■□□□□ 0.19
LDB1-201ENST00000361198 IGHV3-30-3P0DP02 117 aa16.21■□□□□ 0.19
LDB1-201ENST00000361198 PF4P02776 101 aa16.2■□□□□ 0.18
LDB1-201ENST00000361198 A0A0J9YXY3 114 aa16.19■□□□□ 0.18
LDB1-201ENST00000361198 IGHV3-33P01772 117 aa16.19■□□□□ 0.18
LDB1-201ENST00000361198 MUSTN1Q8IVN3 82 aa16.19■□□□□ 0.18
LDB1-201ENST00000361198 TIMM21Q9BVV7 248 aa16.19■□□□□ 0.18
LDB1-201ENST00000361198 NOP10Q9NPE3 64 aaKnown RBP16.19■□□□□ 0.18
LDB1-201ENST00000361198 SPANXA1Q9NS26 97 aa16.19■□□□□ 0.18
LDB1-201ENST00000361198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.18■□□□□ 0.18
LDB1-201ENST00000361198 IGKV2-29A2NJV5 120 aaPredicted RBP16.18■□□□□ 0.18
LDB1-201ENST00000361198 CSNK1G2-AS1Q8NCQ2 148 aa16.18■□□□□ 0.18
LDB1-201ENST00000361198 LINC00482Q8N8I6 264 aa16.17■□□□□ 0.18
LDB1-201ENST00000361198 UBE2D4Q9Y2X8 147 aa16.17■□□□□ 0.18
LDB1-201ENST00000361198 PLAC8L1A1L4L8 177 aa16.17■□□□□ 0.18
LDB1-201ENST00000361198 RNASE13Q5GAN3 156 aaKnown RBP16.17■□□□□ 0.18
LDB1-201ENST00000361198 VWFP04275 2813 aa16.17■□□□□ 0.18
LDB1-201ENST00000361198 HIVEP1P15822 2718 aa16.17■□□□□ 0.18
LDB1-201ENST00000361198 IGHV1-58A0A0C4DH39 117 aa16.16■□□□□ 0.18
LDB1-201ENST00000361198 LITAFQ99732 161 aa16.16■□□□□ 0.18
LDB1-201ENST00000361198 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.16■□□□□ 0.18
LDB1-201ENST00000361198 TINCRA0A1B0GVN0 87 aa16.16■□□□□ 0.18
LDB1-201ENST00000361198 TEN1Q86WV5 123 aa16.16■□□□□ 0.18
LDB1-201ENST00000361198 SMAGPQ0VAQ4 97 aa16.15■□□□□ 0.18
LDB1-201ENST00000361198 DAZ2Q13117 558 aaKnown RBP16.15■□□□□ 0.18
LDB1-201ENST00000361198 TRAV4A0A0B4J268 109 aa16.15■□□□□ 0.18
LDB1-201ENST00000361198 SCGB1C2P0DMR2 95 aa16.15■□□□□ 0.18
LDB1-201ENST00000361198 C16orf74Q96GX8 76 aa16.15■□□□□ 0.18
LDB1-201ENST00000361198 ERG28Q9UKR5 140 aa16.14■□□□□ 0.17
LDB1-201ENST00000361198 TRAV8-3A0A0A6YYJ7 113 aa16.14■□□□□ 0.17
LDB1-201ENST00000361198 PPDPFLQ8WWR9 84 aa16.13■□□□□ 0.17
LDB1-201ENST00000361198 K7EQD1 137 aa16.12■□□□□ 0.17
LDB1-201ENST00000361198 VSIG2Q96IQ7 327 aa16.12■□□□□ 0.17
LDB1-201ENST00000361198 CARD19Q96LW7 228 aa16.12■□□□□ 0.17
LDB1-201ENST00000361198 TENM1Q9UKZ4 2725 aa16.11■□□□□ 0.17
LDB1-201ENST00000361198 M0QXV9 152 aa16.11■□□□□ 0.17
LDB1-201ENST00000361198 Q6ZUT4 128 aa16.11■□□□□ 0.17
LDB1-201ENST00000361198 GAGE7O76087 117 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 GAGE12FP0CL80 117 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 GAGE12GP0CL81 117 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 GAGE12IP0CL82 117 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 SPATA3Q8NHX4 192 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 SPANXDQ9BXN6 97 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 SPANXCQ9NY87 97 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 NDUFA12Q9UI09 145 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 TRBV10-1A0A0K0K1A3 114 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 RPL36AP83881 106 aaKnown RBP16.1■□□□□ 0.17
LDB1-201ENST00000361198 RPL36ALQ969Q0 106 aaKnown RBP16.1■□□□□ 0.17
LDB1-201ENST00000361198 CDIP1Q9H305 208 aa16.1■□□□□ 0.17
LDB1-201ENST00000361198 TRGV2A0A075B6R0 118 aa16.08■□□□□ 0.16
LDB1-201ENST00000361198 ADAMTSL4-AS1Q5T5F5 129 aa16.07■□□□□ 0.16
LDB1-201ENST00000361198 OVOL2Q9BRP0 275 aa16.07■□□□□ 0.16
LDB1-201ENST00000361198 GAGE12JA6NER3 117 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 GAGE4Q13068 117 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 GAGE5Q13069 117 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 ZFAND6Q6FIF0 208 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 IGLV5-45A0A087WSX0 123 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 TRBV30A0A0K0K1B3 111 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 NTM-AS1Q6ZSK4 140 aa16.06■□□□□ 0.16
LDB1-201ENST00000361198 SLC25A20O43772 301 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 SPINK8P0C7L1 97 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 TIRAPP58753 221 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 ANKRD29Q8N6D5 301 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 RNF183Q96D59 192 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 H7C2G1 150 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 LINC00694P0DN24 101 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 MIAQ16674 131 aa16.05■□□□□ 0.16
LDB1-201ENST00000361198 DAZ4Q86SG3 579 aaKnown RBP16.05■□□□□ 0.16
LDB1-201ENST00000361198 GEMIN7Q9H840 131 aaKnown RBP16.05■□□□□ 0.16
LDB1-201ENST00000361198 DAZ3Q9NR90 486 aaKnown RBP16.05■□□□□ 0.16
LDB1-201ENST00000361198 PRSS2P07478 247 aa16.04■□□□□ 0.16
LDB1-201ENST00000361198 LINC01600Q96MT4 127 aa16.03■□□□□ 0.16
LDB1-201ENST00000361198 ATRQ13535 2644 aa16.03■□□□□ 0.16
LDB1-201ENST00000361198 A8MZ25 164 aa16.03■□□□□ 0.16
LDB1-201ENST00000361198 C9JAW5 83 aa16.03■□□□□ 0.16
LDB1-201ENST00000361198 TIMM17BO60830 172 aa16.03■□□□□ 0.16
LDB1-201ENST00000361198 DGAT2L7PQ6IED9 249 aa16.03■□□□□ 0.16
LDB1-201ENST00000361198 Q1RN00 199 aa16.02■□□□□ 0.15
LDB1-201ENST00000361198 CDKN2A-AS1Q9UH64 79 aa16.02■□□□□ 0.15
LDB1-201ENST00000361198 ATXN8Q156A1 80 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms