RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SCXQ7RTU7 201 aa10.26□□□□□ -0.77
SMC5-201ENST00000361138 MRGPRG-AS1Q2M3A8 158 aa10.25□□□□□ -0.77
SMC5-201ENST00000361138 DCANP1Q8TF63 244 aa10.25□□□□□ -0.77
SMC5-201ENST00000361138 SMIM9A6NGZ8 99 aa10.25□□□□□ -0.77
SMC5-201ENST00000361138 DSCAML1Q8TD84 2053 aa10.25□□□□□ -0.77
SMC5-201ENST00000361138 PCNX2A6NKB5 2137 aa10.25□□□□□ -0.77
SMC5-201ENST00000361138 WNK2Q9Y3S1 2297 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 BPY2O14599 106 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 ADAMTSL4-AS1Q5T5F5 129 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 ARFGEF3Q5TH69 2177 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 SNURFQ9Y675 71 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 NDUFC1O43677 76 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 PRO0255Q9UI72 69 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 ABCA1O95477 2261 aa10.24□□□□□ -0.77
SMC5-201ENST00000361138 TNCP24821 2201 aa10.23□□□□□ -0.77
SMC5-201ENST00000361138 PRO0461Q9UI25 63 aa10.23□□□□□ -0.77
SMC5-201ENST00000361138 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
SMC5-201ENST00000361138 NDUFS5O43920 106 aa10.23□□□□□ -0.77
SMC5-201ENST00000361138 SMCPP49901 116 aaPredicted RBP10.23□□□□□ -0.77
SMC5-201ENST00000361138 REG3AQ06141 175 aa10.22□□□□□ -0.77
SMC5-201ENST00000361138 DEFB114Q30KQ6 69 aa10.22□□□□□ -0.77
SMC5-201ENST00000361138 CCKP06307 115 aa10.22□□□□□ -0.77
SMC5-201ENST00000361138 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
SMC5-201ENST00000361138 NRGNQ92686 78 aa10.22□□□□□ -0.77
SMC5-201ENST00000361138 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
SMC5-201ENST00000361138 KLK12Q9UKR0 248 aa10.22□□□□□ -0.77
SMC5-201ENST00000361138 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
SMC5-201ENST00000361138 DEFB113Q30KQ7 82 aa10.21□□□□□ -0.77
SMC5-201ENST00000361138 C9orf66Q5T8R8 295 aa10.21□□□□□ -0.77
SMC5-201ENST00000361138 ZNF580Q9UK33 172 aa10.21□□□□□ -0.77
SMC5-201ENST00000361138 AKAP6Q13023 2319 aa10.21□□□□□ -0.77
SMC5-201ENST00000361138 RAI1Q7Z5J4 1906 aaPredicted RBP10.21□□□□□ -0.77
SMC5-201ENST00000361138 C6orf99Q4VX62 202 aa10.21□□□□□ -0.78
SMC5-201ENST00000361138 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
SMC5-201ENST00000361138 C10orf99Q6UWK7 81 aa10.2□□□□□ -0.78
SMC5-201ENST00000361138 CHCHD7Q9BUK0 85 aa10.2□□□□□ -0.78
SMC5-201ENST00000361138 IGLV1-40P01703 118 aa10.2□□□□□ -0.78
SMC5-201ENST00000361138 AMELXQ99217 191 aa10.2□□□□□ -0.78
SMC5-201ENST00000361138 FAM19A5Q7Z5A7 132 aaPredicted RBP10.19□□□□□ -0.78
SMC5-201ENST00000361138 TRBV7-7A0A0K0K1E9 115 aa10.19□□□□□ -0.78
SMC5-201ENST00000361138 HRCT1Q6UXD1 115 aa10.19□□□□□ -0.78
SMC5-201ENST00000361138 COX6A2Q02221 97 aa10.19□□□□□ -0.78
SMC5-201ENST00000361138 DEFB4AO15263 64 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 RPL28P46779 137 aaKnown RBP10.18□□□□□ -0.78
SMC5-201ENST00000361138 Q6YL49 198 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 PRM2P04554 102 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 WFDC11Q8NEX6 87 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 LINC00242Q5T6M2 205 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 CSDC2Q9Y534 153 aaKnown RBP10.18□□□□□ -0.78
SMC5-201ENST00000361138 ZGRF1Q86YA3 2104 aa10.18□□□□□ -0.78
SMC5-201ENST00000361138 A0A087WYN8 130 aa10.17□□□□□ -0.78
SMC5-201ENST00000361138 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
SMC5-201ENST00000361138 V9GYY9 64 aa10.17□□□□□ -0.78
SMC5-201ENST00000361138 TTC28Q96AY4 2481 aa10.17□□□□□ -0.78
SMC5-201ENST00000361138 A0A087WVE0 104 aa10.17□□□□□ -0.78
SMC5-201ENST00000361138 SMIM1B2RUZ4 78 aa10.17□□□□□ -0.78
SMC5-201ENST00000361138 EDN2P20800 178 aa10.16□□□□□ -0.78
SMC5-201ENST00000361138 CCL18P55774 89 aa10.16□□□□□ -0.78
SMC5-201ENST00000361138 KLK5Q9Y337 293 aaPredicted RBP10.16□□□□□ -0.78
SMC5-201ENST00000361138 SERP1Q9Y6X1 66 aa10.16□□□□□ -0.78
SMC5-201ENST00000361138 UTRNP46939 3433 aa10.16□□□□□ -0.78
SMC5-201ENST00000361138 DEFB135Q30KP9 77 aa10.16□□□□□ -0.78
SMC5-201ENST00000361138 LOC107984640A0A0U1RRK4 108 aa10.15□□□□□ -0.78
SMC5-201ENST00000361138 SPTBN1Q01082 2364 aaKnown RBP10.15□□□□□ -0.78
SMC5-201ENST00000361138 C19orf84I3L1E1 186 aa10.14□□□□□ -0.79
SMC5-201ENST00000361138 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
SMC5-201ENST00000361138 LOC100131303A0A0U1RQF7 123 aa10.14□□□□□ -0.79
SMC5-201ENST00000361138 NDUFB1O75438 58 aa10.14□□□□□ -0.79
SMC5-201ENST00000361138 TET2Q6N021 2002 aaPredicted RBP10.14□□□□□ -0.79
SMC5-201ENST00000361138 CACNA1GO43497 2377 aa10.13□□□□□ -0.79
SMC5-201ENST00000361138 TRAV7A0A075B6U4 112 aa10.13□□□□□ -0.79
SMC5-201ENST00000361138 COL4A2P08572 1712 aa10.13□□□□□ -0.79
SMC5-201ENST00000361138 COX17Q14061 63 aa10.13□□□□□ -0.79
SMC5-201ENST00000361138 SMIM26A0A096LP01 95 aa10.13□□□□□ -0.79
SMC5-201ENST00000361138 PPDPFQ9H3Y8 114 aa10.13□□□□□ -0.79
SMC5-201ENST00000361138 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
SMC5-201ENST00000361138 Q6ZQY7 126 aa10.12□□□□□ -0.79
SMC5-201ENST00000361138 SBSPONQ8IVN8 264 aa10.11□□□□□ -0.79
SMC5-201ENST00000361138 DNAJC9-AS1A6NH13 148 aa10.11□□□□□ -0.79
SMC5-201ENST00000361138 Q8N814 137 aa10.11□□□□□ -0.79
SMC5-201ENST00000361138 ZNF702PQ9H963 129 aa10.11□□□□□ -0.79
SMC5-201ENST00000361138 PLXNB1O43157 2135 aa10.11□□□□□ -0.79
SMC5-201ENST00000361138 LYRM9A8MSI8 78 aa10.1□□□□□ -0.79
SMC5-201ENST00000361138 CD164L2Q6UWJ8 174 aa10.1□□□□□ -0.79
SMC5-201ENST00000361138 ZNF843Q8N446 348 aa10.1□□□□□ -0.79
SMC5-201ENST00000361138 SHISA2Q6UWI4 295 aa10.1□□□□□ -0.79
SMC5-201ENST00000361138 Q8IZM0 81 aa10.1□□□□□ -0.79
SMC5-201ENST00000361138 MIFP14174 115 aa10.09□□□□□ -0.79
SMC5-201ENST00000361138 KIF25-AS1Q9Y6Z4 181 aa10.09□□□□□ -0.79
SMC5-201ENST00000361138 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
SMC5-201ENST00000361138 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
SMC5-201ENST00000361138 C1orf195Q5TG92 126 aa10.08□□□□□ -0.8
SMC5-201ENST00000361138 C18orf65Q6ZTR6 163 aa10.08□□□□□ -0.8
SMC5-201ENST00000361138 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
SMC5-201ENST00000361138 SPTSSBQ8NFR3 76 aa10.08□□□□□ -0.8
SMC5-201ENST00000361138 C3orf84H3BNL1 204 aa10.08□□□□□ -0.8
SMC5-201ENST00000361138 IGHV4-31P0DP07 118 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 321.3 ms