RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 CRYGDP07320 174 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 ZNF876PQ49A33 203 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 SCGB1D4Q6XE38 83 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 TRPT1Q86TN4 253 aaKnown RBP10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 ARL17AQ8IVW1 177 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 MGAM2Q2M2H8 2515 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
CSNK1E-201ENST00000359867 ZNF415Q09FC8 603 aa10.05□□□□□ -0.8
CSNK1E-201ENST00000359867 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
CSNK1E-201ENST00000359867 F5H697 171 aa10.05□□□□□ -0.8
CSNK1E-201ENST00000359867 ANKRD29Q8N6D5 301 aa10.05□□□□□ -0.8
CSNK1E-201ENST00000359867 C5orf47Q569G3 176 aa10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 LINC01587Q99440 93 aa10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 LOC107984640A0A0U1RRK4 108 aa10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 SNCGO76070 127 aa10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 POLR2KP53803 58 aaKnown RBP10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 BEAN1Q3B7T3 259 aa10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 DNHD1Q96M86 4753 aa10.04□□□□□ -0.8
CSNK1E-201ENST00000359867 LINC01549A6NIU2 74 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 M0R2P5 195 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 VCYO14598 125 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 HTN1P15515 57 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 RPL39P62891 51 aaKnown RBP10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 NBEAL1Q6ZS30 2694 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 M0QY20 66 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 ZNF56Q15929 161 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 EDA2RQ9HAV5 297 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 TP53TG1Q9Y2A0 90 aa10.03□□□□□ -0.8
CSNK1E-201ENST00000359867 C11orf86A6NJI1 115 aa10.02□□□□□ -0.81
CSNK1E-201ENST00000359867 A8MWV9 139 aa10.02□□□□□ -0.81
CSNK1E-201ENST00000359867 WIPF1O43516 503 aa10.02□□□□□ -0.81
CSNK1E-201ENST00000359867 C19orf73Q9NVV2 129 aa10.02□□□□□ -0.81
CSNK1E-201ENST00000359867 TCL1BO95988 128 aa10.02□□□□□ -0.81
CSNK1E-201ENST00000359867 C11orf72Q8NBR9 251 aa10.02□□□□□ -0.81
CSNK1E-201ENST00000359867 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 TSHBP01222 138 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 LINC00694P0DN24 101 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 KRTAP10-11P60412 298 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 XCL2Q9UBD3 114 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 VCX2Q9H322 139 aa10.01□□□□□ -0.81
CSNK1E-201ENST00000359867 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
CSNK1E-201ENST00000359867 C1orf158Q8N1D5 194 aa10□□□□□ -0.81
CSNK1E-201ENST00000359867 IGLV4-69A0A075B6H9 119 aa9.99□□□□□ -0.81
CSNK1E-201ENST00000359867 CHCHD5Q9BSY4 110 aa9.99□□□□□ -0.81
CSNK1E-201ENST00000359867 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
CSNK1E-201ENST00000359867 KRTAP21-3Q3LHN1 58 aa9.99□□□□□ -0.81
CSNK1E-201ENST00000359867 A4D1N5 150 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 UBE2D3P61077 147 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 UBE2D2P62837 147 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 PRM2P04554 102 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 SBSPONQ8IVN8 264 aa9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 OPRPNQ99935 248 aaPredicted RBP9.98□□□□□ -0.81
CSNK1E-201ENST00000359867 EGFEM1PQ0D2K5 195 aa9.97□□□□□ -0.81
CSNK1E-201ENST00000359867 RPL35AP18077 110 aaKnown RBP9.96□□□□□ -0.81
CSNK1E-201ENST00000359867 RHOHQ15669 191 aa9.96□□□□□ -0.81
CSNK1E-201ENST00000359867 IL17DQ8TAD2 202 aa9.96□□□□□ -0.81
CSNK1E-201ENST00000359867 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
CSNK1E-201ENST00000359867 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.82
CSNK1E-201ENST00000359867 UBE2D1P51668 147 aa9.96□□□□□ -0.82
CSNK1E-201ENST00000359867 A0A0J9YY99 117 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 IGIPA6NJ69 53 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 RS1O15537 224 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 Q6Q795 121 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 C15orf53Q8NAA6 179 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 TMEM126AQ9H061 195 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 I3L3M4 83 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 GIG44P09565 113 aaPredicted RBP9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 PMVKQ15126 192 aa9.95□□□□□ -0.82
CSNK1E-201ENST00000359867 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
CSNK1E-201ENST00000359867 TMEM141Q96I45 108 aa9.94□□□□□ -0.82
CSNK1E-201ENST00000359867 DNAH3Q8TD57 4116 aa9.94□□□□□ -0.82
CSNK1E-201ENST00000359867 IGHV3OR16-12A0A075B7B8 117 aa9.94□□□□□ -0.82
CSNK1E-201ENST00000359867 DNAJC30Q96LL9 226 aa9.94□□□□□ -0.82
CSNK1E-201ENST00000359867 HERVK_113P61574 105 aa9.93□□□□□ -0.82
CSNK1E-201ENST00000359867 TIMM17AQ99595 171 aa9.93□□□□□ -0.82
CSNK1E-201ENST00000359867 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
CSNK1E-201ENST00000359867 IGHV3-73A0A0B4J1V6 119 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 IGHV3-53P01767 116 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 H7C2G1 150 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 SLC25A20O43772 301 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 CFC1P0CG37 223 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 NBEAL2Q6ZNJ1 2754 aa9.92□□□□□ -0.82
CSNK1E-201ENST00000359867 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 CSNK1G2-AS1Q8NCQ2 148 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 KLK5Q9Y337 293 aaPredicted RBP9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 C9JAW5 83 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 IGHV4-30-4P0DP06 118 aa9.91□□□□□ -0.82
CSNK1E-201ENST00000359867 DAZ2Q13117 558 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms