RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 Q9HAA7 133 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 IGHV1-58A0A0C4DH39 117 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 EBI3Q14213 229 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 MUC3AQ02505 3323 aa8.49□□□□□ -1.05
CNOT3-202ENST00000358389 LINC00315P59091 139 aa8.49□□□□□ -1.05
CNOT3-202ENST00000358389 LRRC75A-AS1Q8N1F1 130 aa8.49□□□□□ -1.05
CNOT3-202ENST00000358389 SMCR5Q8TEV8 140 aa8.49□□□□□ -1.05
CNOT3-202ENST00000358389 IGHV4-59P01825 116 aa8.49□□□□□ -1.05
CNOT3-202ENST00000358389 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
CNOT3-202ENST00000358389 DSCR8Q96T75 97 aa8.49□□□□□ -1.05
CNOT3-202ENST00000358389 IGHV4-61A0A0C4DH41 118 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 MALP21145 153 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
CNOT3-202ENST00000358389 IGHV1OR15-1A0A075B7D0 117 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
CNOT3-202ENST00000358389 NDUFA4O00483 81 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 IGHV4-38-2P0DP08 117 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 MED14OSP0DP75 135 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 KIF25-AS1Q9Y6Z4 181 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 ZFP36P26651 326 aaKnown RBP8.48□□□□□ -1.05
CNOT3-202ENST00000358389 POM121L12Q8N7R1 296 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 ATOX1O00244 68 aa8.48□□□□□ -1.05
CNOT3-202ENST00000358389 M0QY20 66 aa8.47□□□□□ -1.05
CNOT3-202ENST00000358389 Q9H8V8 135 aa8.47□□□□□ -1.05
CNOT3-202ENST00000358389 KIR2DL5BQ8NHK3 375 aa8.47□□□□□ -1.05
CNOT3-202ENST00000358389 TIRAPP58753 221 aa8.47□□□□□ -1.05
CNOT3-202ENST00000358389 C6orf226Q5I0X4 101 aa8.46□□□□□ -1.05
CNOT3-202ENST00000358389 HRCT1Q6UXD1 115 aa8.46□□□□□ -1.05
CNOT3-202ENST00000358389 INAFM2P0DMQ5 153 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 PFN2P35080 140 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 RNF152Q8N8N0 203 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 A0A0J9YX75 114 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 ODF3BA8MYP8 253 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 INSP01308 110 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 VSIG2Q96IQ7 327 aa8.46□□□□□ -1.06
CNOT3-202ENST00000358389 Q8NA96 180 aa8.45□□□□□ -1.06
CNOT3-202ENST00000358389 COX7A2LO14548 114 aa8.45□□□□□ -1.06
CNOT3-202ENST00000358389 SPANXDQ9BXN6 97 aa8.45□□□□□ -1.06
CNOT3-202ENST00000358389 SPANXCQ9NY87 97 aa8.45□□□□□ -1.06
CNOT3-202ENST00000358389 DMXL1Q9Y485 3027 aa8.45□□□□□ -1.06
CNOT3-202ENST00000358389 MAP1AP78559 2803 aaPredicted RBP8.45□□□□□ -1.06
CNOT3-202ENST00000358389 A0A087WVE0 104 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 CRPP02741 224 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 ATP5G1P05496 136 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 DEFB112Q30KQ8 113 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 LITAFQ99732 161 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 LRBAP50851 2863 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
CNOT3-202ENST00000358389 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
CNOT3-202ENST00000358389 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
CNOT3-202ENST00000358389 RBMY1A1P0DJD3 496 aaKnown RBP8.44□□□□□ -1.06
CNOT3-202ENST00000358389 RBMY1CP0DJD4 496 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 PROK1P58294 105 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 CDKN2A-AS1Q9UH64 79 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 ADORA2A-AS1P86434 159 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 Q8N6K4 173 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 FLNBO75369 2602 aaKnown RBP8.44□□□□□ -1.06
CNOT3-202ENST00000358389 IGHV4-30-2A0A087WSY4 118 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 TINCRA0A1B0GVN0 87 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 C14orf132Q9NPU4 83 aa8.44□□□□□ -1.06
CNOT3-202ENST00000358389 TRBV6-5A0A0K0K1A5 114 aa8.43□□□□□ -1.06
CNOT3-202ENST00000358389 U3KQE9 123 aa8.43□□□□□ -1.06
CNOT3-202ENST00000358389 A0A096LPF7 62 aa8.43□□□□□ -1.06
CNOT3-202ENST00000358389 TMEM86BQ8N661 226 aa8.43□□□□□ -1.06
CNOT3-202ENST00000358389 USP24Q9UPU5 2620 aa8.43□□□□□ -1.06
CNOT3-202ENST00000358389 F5H768 121 aa8.43□□□□□ -1.06
CNOT3-202ENST00000358389 C4orf26Q17RF5 130 aa8.42□□□□□ -1.06
CNOT3-202ENST00000358389 LINC00308Q8TCZ7 52 aa8.42□□□□□ -1.06
CNOT3-202ENST00000358389 COL27A1Q8IZC6 1860 aaPredicted RBP8.42□□□□□ -1.06
CNOT3-202ENST00000358389 APRG1Q8IVJ8 170 aa8.42□□□□□ -1.06
CNOT3-202ENST00000358389 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
CNOT3-202ENST00000358389 S100A7L2Q5SY68 101 aa8.41□□□□□ -1.06
CNOT3-202ENST00000358389 Q8N2B8 174 aa8.41□□□□□ -1.06
CNOT3-202ENST00000358389 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
CNOT3-202ENST00000358389 C10orf105Q8TEF2 133 aa8.41□□□□□ -1.06
CNOT3-202ENST00000358389 MRPS36P82909 103 aaKnown RBP8.41□□□□□ -1.06
CNOT3-202ENST00000358389 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.06
CNOT3-202ENST00000358389 CITED2Q99967 270 aaPredicted RBP8.4□□□□□ -1.06
CNOT3-202ENST00000358389 LAMA5O15230 3695 aa8.4□□□□□ -1.06
CNOT3-202ENST00000358389 TRAV25A0A0B4J276 109 aa8.4□□□□□ -1.06
CNOT3-202ENST00000358389 EDN2P20800 178 aa8.4□□□□□ -1.06
CNOT3-202ENST00000358389 RPL18AQ02543 176 aaKnown RBP8.4□□□□□ -1.06
CNOT3-202ENST00000358389 J3QLI3 93 aa8.4□□□□□ -1.07
CNOT3-202ENST00000358389 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
CNOT3-202ENST00000358389 SLURP1P55000 103 aa8.39□□□□□ -1.07
CNOT3-202ENST00000358389 PRM2P04554 102 aa8.39□□□□□ -1.07
CNOT3-202ENST00000358389 CRYGAP11844 174 aa8.39□□□□□ -1.07
CNOT3-202ENST00000358389 CXCL5P42830 114 aa8.39□□□□□ -1.07
CNOT3-202ENST00000358389 DEFB113Q30KQ7 82 aa8.39□□□□□ -1.07
CNOT3-202ENST00000358389 KLLNB2CW77 178 aa8.38□□□□□ -1.07
CNOT3-202ENST00000358389 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
CNOT3-202ENST00000358389 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
CNOT3-202ENST00000358389 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
CNOT3-202ENST00000358389 TMEM258P61165 79 aa8.38□□□□□ -1.07
CNOT3-202ENST00000358389 SERP2Q8N6R1 65 aa8.38□□□□□ -1.07
CNOT3-202ENST00000358389 SOCS3O14543 225 aa8.37□□□□□ -1.07
CNOT3-202ENST00000358389 ASH1LQ9NR48 2969 aaKnown RBP8.37□□□□□ -1.07
CNOT3-202ENST00000358389 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
CNOT3-202ENST00000358389 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms