RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 PMVKQ15126 192 aa9.78□□□□□ -0.84
LSS-201ENST00000356396 C16orf74Q96GX8 76 aa9.78□□□□□ -0.84
LSS-201ENST00000356396 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
LSS-201ENST00000356396 TRAV26-1A0A087WT03 109 aa9.77□□□□□ -0.85
LSS-201ENST00000356396 ZNF815PA8K554 130 aa9.77□□□□□ -0.85
LSS-201ENST00000356396 CHCHD5Q9BSY4 110 aa9.77□□□□□ -0.85
LSS-201ENST00000356396 ZMAT4Q9H898 229 aa9.77□□□□□ -0.85
LSS-201ENST00000356396 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
LSS-201ENST00000356396 TRBV6-5A0A0K0K1A5 114 aa9.76□□□□□ -0.85
LSS-201ENST00000356396 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
LSS-201ENST00000356396 BOD1L2Q8IYS8 172 aa9.76□□□□□ -0.85
LSS-201ENST00000356396 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
LSS-201ENST00000356396 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
LSS-201ENST00000356396 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
LSS-201ENST00000356396 NHP2Q9NX24 153 aaKnown RBP9.75□□□□□ -0.85
LSS-201ENST00000356396 CDKN2A-AS1Q9UH64 79 aa9.75□□□□□ -0.85
LSS-201ENST00000356396 CFAP161Q6P656 301 aa9.75□□□□□ -0.85
LSS-201ENST00000356396 CCL25O15444 150 aa9.74□□□□□ -0.85
LSS-201ENST00000356396 TRAV4A0A0B4J268 109 aa9.74□□□□□ -0.85
LSS-201ENST00000356396 PTTG1IPP53801 180 aa9.74□□□□□ -0.85
LSS-201ENST00000356396 TMEM97Q5BJF2 176 aa9.74□□□□□ -0.85
LSS-201ENST00000356396 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
LSS-201ENST00000356396 H7C2G1 150 aa9.73□□□□□ -0.85
LSS-201ENST00000356396 EIF4EBP3O60516 100 aaPredicted RBP9.73□□□□□ -0.85
LSS-201ENST00000356396 PPP1R17O96001 155 aa9.73□□□□□ -0.85
LSS-201ENST00000356396 AMMECR1LQ6DCA0 310 aa9.73□□□□□ -0.85
LSS-201ENST00000356396 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
LSS-201ENST00000356396 HIST1H4GQ99525 98 aa9.73□□□□□ -0.85
LSS-201ENST00000356396 MEGF8Q7Z7M0 2845 aa9.73□□□□□ -0.85
LSS-201ENST00000356396 A6NJY4 79 aa9.72□□□□□ -0.85
LSS-201ENST00000356396 ZNF22P17026 224 aaPredicted RBP9.72□□□□□ -0.85
LSS-201ENST00000356396 DAD1P61803 113 aa9.72□□□□□ -0.85
LSS-201ENST00000356396 TOMM7Q9P0U1 55 aa9.72□□□□□ -0.85
LSS-201ENST00000356396 DAZ2Q13117 558 aaKnown RBP9.72□□□□□ -0.85
LSS-201ENST00000356396 H3BUT2 72 aa9.71□□□□□ -0.85
LSS-201ENST00000356396 APOMO95445 188 aa9.71□□□□□ -0.85
LSS-201ENST00000356396 UBE2D3P61077 147 aa9.71□□□□□ -0.85
LSS-201ENST00000356396 UBE2D2P62837 147 aa9.71□□□□□ -0.85
LSS-201ENST00000356396 RHODO00212 210 aa9.71□□□□□ -0.86
LSS-201ENST00000356396 PLNP26678 52 aa9.71□□□□□ -0.86
LSS-201ENST00000356396 C5orf38Q86SI9 138 aa9.71□□□□□ -0.86
LSS-201ENST00000356396 SBSPONQ8IVN8 264 aa9.71□□□□□ -0.86
LSS-201ENST00000356396 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.86
LSS-201ENST00000356396 MRPS16Q9Y3D3 137 aaKnown RBP9.71□□□□□ -0.86
LSS-201ENST00000356396 HUWE1Q7Z6Z7 4374 aaKnown RBP9.71□□□□□ -0.86
LSS-201ENST00000356396 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 NANOS2P60321 138 aaKnown RBP9.7□□□□□ -0.86
LSS-201ENST00000356396 RBX1P62877 108 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 UBE2L6O14933 153 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 VAMP3Q15836 100 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 Q6ZTC4 211 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 CLUHP3Q96NS8 147 aa9.7□□□□□ -0.86
LSS-201ENST00000356396 PAX4O43316 350 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 SRSF9Q13242 221 aaKnown RBP eCLIP9.69□□□□□ -0.86
LSS-201ENST00000356396 Q8NAQ8 132 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 A0A0J9YWU9 116 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 PRSS2P07478 247 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 INSL3P51460 131 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 TIMM17AQ99595 171 aa9.69□□□□□ -0.86
LSS-201ENST00000356396 DNAH7Q8WXX0 4024 aa9.68□□□□□ -0.86
LSS-201ENST00000356396 TRAV12-1A0A0B4J245 112 aa9.68□□□□□ -0.86
LSS-201ENST00000356396 XCL1P47992 114 aa9.68□□□□□ -0.86
LSS-201ENST00000356396 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
LSS-201ENST00000356396 PRKDCP78527 4128 aaKnown RBP9.68□□□□□ -0.86
LSS-201ENST00000356396 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 J3QQQ9 107 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 RHOHQ15669 191 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 OVOL2Q9BRP0 275 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 COX11Q9Y6N1 276 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 IGHV3-30-3P0DP02 117 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 UBE2V1Q13404 147 aa9.67□□□□□ -0.86
LSS-201ENST00000356396 CRYBA4P53673 196 aa9.66□□□□□ -0.86
LSS-201ENST00000356396 DNAH10Q8IVF4 4471 aa9.66□□□□□ -0.86
LSS-201ENST00000356396 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
LSS-201ENST00000356396 APOC4P55056 127 aa9.65□□□□□ -0.86
LSS-201ENST00000356396 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
LSS-201ENST00000356396 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
LSS-201ENST00000356396 E9PLD3 99 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 IGHV3-30P01768 117 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 IGHV3-33P01772 117 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 IGHV3-30-5P0DP03 117 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.87
LSS-201ENST00000356396 ADAMTSL4-AS1Q5T5F5 129 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 OR5A1Q8NGJ0 315 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 TMEM243Q9BU79 118 aa9.65□□□□□ -0.87
LSS-201ENST00000356396 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
LSS-201ENST00000356396 DAZ4Q86SG3 579 aaKnown RBP9.64□□□□□ -0.87
LSS-201ENST00000356396 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
LSS-201ENST00000356396 DAZ3Q9NR90 486 aaKnown RBP9.64□□□□□ -0.87
LSS-201ENST00000356396 DNAH3Q8TD57 4116 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 TMEM223A0PJW6 202 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 CIDEAO60543 219 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 RNF151Q2KHN1 245 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 C12orf74Q32Q52 190 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 LINC00269Q8N2A0 174 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 AMELXQ99217 191 aa9.63□□□□□ -0.87
LSS-201ENST00000356396 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms