RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 CMC4P56277 68 aaPredicted RBP9.31□□□□□ -0.92
RNF220-202ENST00000355387 ODF3L2Q3SX64 289 aa9.31□□□□□ -0.92
RNF220-202ENST00000355387 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
RNF220-202ENST00000355387 TRAV8-4A0A0B4J246 113 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 RNASE13Q5GAN3 156 aaKnown RBP9.3□□□□□ -0.92
RNF220-202ENST00000355387 DGAT2L7PQ6IED9 249 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 MAPK1IP1LQ8NDC0 245 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
RNF220-202ENST00000355387 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 IGHV3OR16-12A0A075B7B8 117 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 TRAV4A0A0B4J268 109 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 VPS13CQ709C8 3753 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 FAM240AA0A1B0GVK7 77 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 RPL36AP83881 106 aaKnown RBP9.3□□□□□ -0.92
RNF220-202ENST00000355387 LINC00242Q5T6M2 205 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 C1orf158Q8N1D5 194 aa9.3□□□□□ -0.92
RNF220-202ENST00000355387 RPL36ALQ969Q0 106 aaKnown RBP9.3□□□□□ -0.92
RNF220-202ENST00000355387 K7EQD1 137 aa9.29□□□□□ -0.92
RNF220-202ENST00000355387 H7C423 109 aa9.29□□□□□ -0.92
RNF220-202ENST00000355387 STHQ8IWL8 128 aa9.29□□□□□ -0.92
RNF220-202ENST00000355387 PRM2P04554 102 aa9.28□□□□□ -0.92
RNF220-202ENST00000355387 HERV-K104P63124 156 aa9.28□□□□□ -0.92
RNF220-202ENST00000355387 IGHV3-38A0A0C4DH36 116 aa9.28□□□□□ -0.92
RNF220-202ENST00000355387 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
RNF220-202ENST00000355387 C2orf82Q6UX34 121 aa9.28□□□□□ -0.92
RNF220-202ENST00000355387 LINC00308Q8TCZ7 52 aa9.28□□□□□ -0.92
RNF220-202ENST00000355387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.27□□□□□ -0.93
RNF220-202ENST00000355387 SMIM1B2RUZ4 78 aa9.27□□□□□ -0.93
RNF220-202ENST00000355387 A8MZ25 164 aa9.26□□□□□ -0.93
RNF220-202ENST00000355387 COX6A2Q02221 97 aa9.26□□□□□ -0.93
RNF220-202ENST00000355387 Q6ZSV7 163 aa9.26□□□□□ -0.93
RNF220-202ENST00000355387 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
RNF220-202ENST00000355387 CACNA1AO00555 2505 aa9.26□□□□□ -0.93
RNF220-202ENST00000355387 ANKRD17O75179 2603 aaKnown RBP9.26□□□□□ -0.93
RNF220-202ENST00000355387 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
RNF220-202ENST00000355387 CRLF1O75462 422 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 KHDC1LQ5JSQ8 128 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 CITED2Q99967 270 aaPredicted RBP9.25□□□□□ -0.93
RNF220-202ENST00000355387 CDC42SE2Q9NRR3 84 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 CFAP46Q8IYW2 2715 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 F5H768 121 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 Q9H8V8 135 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 SORL1Q92673 2214 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 USP9XQ93008 2570 aaPredicted RBP9.25□□□□□ -0.93
RNF220-202ENST00000355387 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 SHISA2Q6UWI4 295 aa9.25□□□□□ -0.93
RNF220-202ENST00000355387 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
RNF220-202ENST00000355387 KRTAP1-3Q8IUG1 177 aa9.24□□□□□ -0.93
RNF220-202ENST00000355387 COX7A2LO14548 114 aa9.24□□□□□ -0.93
RNF220-202ENST00000355387 NTM-AS1Q6ZSK4 140 aa9.24□□□□□ -0.93
RNF220-202ENST00000355387 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
RNF220-202ENST00000355387 Q96MF0 132 aa9.23□□□□□ -0.93
RNF220-202ENST00000355387 SPG11Q96JI7 2443 aa9.23□□□□□ -0.93
RNF220-202ENST00000355387 PF4P02776 101 aa9.23□□□□□ -0.93
RNF220-202ENST00000355387 LINC00694P0DN24 101 aa9.23□□□□□ -0.93
RNF220-202ENST00000355387 FAM222AQ5U5X8 452 aa9.23□□□□□ -0.93
RNF220-202ENST00000355387 TRBV7-7A0A0K0K1E9 115 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 TRBV6-4A0A1B0GX49 114 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 CCL24O00175 119 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 TMEM126AQ9H061 195 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 TRACP01848 142 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 CLEC2BQ92478 149 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 OVOL2Q9BRP0 275 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
RNF220-202ENST00000355387 CELSR2Q9HCU4 2923 aa9.21□□□□□ -0.93
RNF220-202ENST00000355387 ACYP1P07311 99 aa9.21□□□□□ -0.93
RNF220-202ENST00000355387 Q6ZTI0 123 aa9.21□□□□□ -0.93
RNF220-202ENST00000355387 DNAJC9-AS1A6NH13 148 aa9.21□□□□□ -0.94
RNF220-202ENST00000355387 KRTAP10-9P60411 292 aa9.21□□□□□ -0.94
RNF220-202ENST00000355387 IMUPQ9GZP8 106 aa9.21□□□□□ -0.94
RNF220-202ENST00000355387 IGSF10Q6WRI0 2623 aa9.21□□□□□ -0.94
RNF220-202ENST00000355387 NPC2P61916 151 aa9.2□□□□□ -0.94
RNF220-202ENST00000355387 PRIMA1Q86XR5 153 aa9.2□□□□□ -0.94
RNF220-202ENST00000355387 C16orf95Q9H693 158 aa9.2□□□□□ -0.94
RNF220-202ENST00000355387 FLNCQ14315 2725 aa9.2□□□□□ -0.94
RNF220-202ENST00000355387 PLAC8L1A1L4L8 177 aa9.19□□□□□ -0.94
RNF220-202ENST00000355387 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
RNF220-202ENST00000355387 UBE2L6O14933 153 aa9.19□□□□□ -0.94
RNF220-202ENST00000355387 DAND5Q8N907 189 aa9.19□□□□□ -0.94
RNF220-202ENST00000355387 GIG44P09565 113 aaPredicted RBP9.18□□□□□ -0.94
RNF220-202ENST00000355387 COL12A1Q99715 3063 aa9.18□□□□□ -0.94
RNF220-202ENST00000355387 PIEZO1Q92508 2521 aa9.18□□□□□ -0.94
RNF220-202ENST00000355387 TRAV13-1A0A0B4J241 112 aa9.18□□□□□ -0.94
RNF220-202ENST00000355387 MEIG1Q5JSS6 88 aa9.18□□□□□ -0.94
RNF220-202ENST00000355387 SMIM20Q8N5G0 67 aa9.18□□□□□ -0.94
RNF220-202ENST00000355387 TRAV13-2A0A0B4J235 113 aa9.17□□□□□ -0.94
RNF220-202ENST00000355387 ZNF843Q8N446 348 aa9.17□□□□□ -0.94
RNF220-202ENST00000355387 NOP10Q9NPE3 64 aaKnown RBP9.16□□□□□ -0.94
RNF220-202ENST00000355387 IGLV1-51P01701 117 aa9.16□□□□□ -0.94
RNF220-202ENST00000355387 CSNK1G2-AS1Q8NCQ2 148 aa9.16□□□□□ -0.94
RNF220-202ENST00000355387 CRYBG3Q68DQ2 2970 aa9.16□□□□□ -0.94
RNF220-202ENST00000355387 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
RNF220-202ENST00000355387 C19orf73Q9NVV2 129 aa9.16□□□□□ -0.94
RNF220-202ENST00000355387 FBN2P35556 2912 aa9.15□□□□□ -0.94
RNF220-202ENST00000355387 NDUFA7O95182 113 aa9.15□□□□□ -0.94
RNF220-202ENST00000355387 COX7B2Q8TF08 81 aa9.15□□□□□ -0.94
RNF220-202ENST00000355387 HIST2H2BCQ6DN03 193 aa9.15□□□□□ -0.95
RNF220-202ENST00000355387 HIST2H2BDQ6DRA6 164 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms