RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 IGIPA6NJ69 53 aa9.43□□□□□ -0.9
SYNCRIP-201ENST00000355238 LINC01548A6NM66 108 aa9.43□□□□□ -0.9
SYNCRIP-201ENST00000355238 LY6LH3BQJ8 138 aa9.43□□□□□ -0.9
SYNCRIP-201ENST00000355238 DEFB135Q30KP9 77 aa9.43□□□□□ -0.9
SYNCRIP-201ENST00000355238 WFDC10BQ8IUB3 73 aa9.43□□□□□ -0.9
SYNCRIP-201ENST00000355238 C11orf21Q9P2W6 132 aa9.43□□□□□ -0.9
SYNCRIP-201ENST00000355238 GAS8-AS1O95177 125 aa9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 FBXL19-AS1Q494R0 122 aa9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 C3orf84H3BNL1 204 aa9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 HIGD2AQ9BW72 106 aa9.42□□□□□ -0.9
SYNCRIP-201ENST00000355238 DEFB113Q30KQ7 82 aa9.41□□□□□ -0.9
SYNCRIP-201ENST00000355238 CSDC2Q9Y534 153 aaKnown RBP9.41□□□□□ -0.9
SYNCRIP-201ENST00000355238 TNFRSF13BO14836 293 aaPredicted RBP9.41□□□□□ -0.9
SYNCRIP-201ENST00000355238 POM121L12Q8N7R1 296 aa9.41□□□□□ -0.9
SYNCRIP-201ENST00000355238 CRIP2P52943 208 aaPredicted RBP9.41□□□□□ -0.9
SYNCRIP-201ENST00000355238 MUC7Q8TAX7 377 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 TMEM131Q92545 1883 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 C9orf85Q96MD7 179 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 KLLNB2CW77 178 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 ADORA2A-AS1P86434 159 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 PROK1P58294 105 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 COX17Q14061 63 aa9.4□□□□□ -0.9
SYNCRIP-201ENST00000355238 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.91
SYNCRIP-201ENST00000355238 DEFB4AO15263 64 aa9.39□□□□□ -0.91
SYNCRIP-201ENST00000355238 CRYGDP07320 174 aa9.39□□□□□ -0.91
SYNCRIP-201ENST00000355238 PRR9Q5T870 116 aa9.39□□□□□ -0.91
SYNCRIP-201ENST00000355238 DHRS4-AS1Q9P1J3 65 aa9.39□□□□□ -0.91
SYNCRIP-201ENST00000355238 RIF1Q5UIP0 2472 aaKnown RBP9.39□□□□□ -0.91
SYNCRIP-201ENST00000355238 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 NRGNQ92686 78 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 PMAIP1Q13794 54 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 CD164L2Q6UWJ8 174 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 TNCP24821 2201 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
SYNCRIP-201ENST00000355238 IGLV4-69A0A075B6H9 119 aa9.37□□□□□ -0.91
SYNCRIP-201ENST00000355238 M0R378 163 aa9.37□□□□□ -0.91
SYNCRIP-201ENST00000355238 KIAA1549LQ6ZVL6 1849 aa9.37□□□□□ -0.91
SYNCRIP-201ENST00000355238 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
SYNCRIP-201ENST00000355238 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
SYNCRIP-201ENST00000355238 LMO4P61968 165 aa9.37□□□□□ -0.91
SYNCRIP-201ENST00000355238 PRR4Q16378 134 aa9.36□□□□□ -0.91
SYNCRIP-201ENST00000355238 MED12LQ86YW9 2145 aa9.36□□□□□ -0.91
SYNCRIP-201ENST00000355238 Q8N9L7 120 aa9.36□□□□□ -0.91
SYNCRIP-201ENST00000355238 PLXNB1O43157 2135 aa9.36□□□□□ -0.91
SYNCRIP-201ENST00000355238 A0A087WVE0 104 aa9.36□□□□□ -0.91
SYNCRIP-201ENST00000355238 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
SYNCRIP-201ENST00000355238 WFDC13Q8IUB5 93 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 KIR2DL5BQ8NHK3 375 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 TRBV7-7A0A0K0K1E9 115 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 PRYO14603 147 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 PSMG3-AS1Q96PY0 264 aa9.35□□□□□ -0.91
SYNCRIP-201ENST00000355238 C22orf34Q6ZV56 151 aa9.34□□□□□ -0.91
SYNCRIP-201ENST00000355238 KIAA1549Q9HCM3 1950 aa9.34□□□□□ -0.91
SYNCRIP-201ENST00000355238 A0A096LNJ9 63 aa9.34□□□□□ -0.91
SYNCRIP-201ENST00000355238 LINC00959A0A1B0GUT2 108 aa9.34□□□□□ -0.91
SYNCRIP-201ENST00000355238 Q8IZM0 81 aa9.34□□□□□ -0.91
SYNCRIP-201ENST00000355238 PCNX3Q9H6A9 2034 aa9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 KIF26AQ9ULI4 1882 aaPredicted RBP9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 ZNF73O43830 326 aaPredicted RBP9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 KLK5Q9Y337 293 aaPredicted RBP9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
SYNCRIP-201ENST00000355238 SYCNQ0VAF6 134 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 MRGPRG-AS1Q2M3A8 158 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 COX8CQ7Z4L0 72 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 Q8N6K4 173 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 Q8N814 137 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 CDC42SE2Q9NRR3 84 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 WISP2O76076 250 aa9.32□□□□□ -0.92
SYNCRIP-201ENST00000355238 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
SYNCRIP-201ENST00000355238 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
SYNCRIP-201ENST00000355238 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
SYNCRIP-201ENST00000355238 HCFC1P51610 2035 aa9.3□□□□□ -0.92
SYNCRIP-201ENST00000355238 A0A096LNI7 61 aa9.3□□□□□ -0.92
SYNCRIP-201ENST00000355238 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
SYNCRIP-201ENST00000355238 SMIM1B2RUZ4 78 aa9.3□□□□□ -0.92
SYNCRIP-201ENST00000355238 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
SYNCRIP-201ENST00000355238 PCDH15Q96QU1 1955 aa9.29□□□□□ -0.92
SYNCRIP-201ENST00000355238 Q8N3U1 123 aa9.29□□□□□ -0.92
SYNCRIP-201ENST00000355238 NUP210LQ5VU65 1888 aa9.29□□□□□ -0.92
SYNCRIP-201ENST00000355238 CELA1Q9UNI1 258 aa9.29□□□□□ -0.92
SYNCRIP-201ENST00000355238 IGLV2-18A0A075B6J9 118 aa9.28□□□□□ -0.92
SYNCRIP-201ENST00000355238 A0A087WYN8 130 aa9.28□□□□□ -0.92
SYNCRIP-201ENST00000355238 Q6YL49 198 aa9.28□□□□□ -0.92
SYNCRIP-201ENST00000355238 PRORYQ9H606 182 aa9.28□□□□□ -0.92
SYNCRIP-201ENST00000355238 Q6ZSV7 163 aa9.28□□□□□ -0.92
SYNCRIP-201ENST00000355238 IGKV2-28A0A075B6P5 120 aa9.27□□□□□ -0.92
SYNCRIP-201ENST00000355238 IGKV2D-28P01615 120 aa9.27□□□□□ -0.92
SYNCRIP-201ENST00000355238 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms