RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ERC2-IT1O76042 136 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 XGP55808 180 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 GNRH2O43555 120 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 TRBV7-6A0A0J9YX20 115 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 LINC00694P0DN24 101 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 LINC01546A6NGU7 62 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 CGB3P0DN86 165 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 ESRGQ1W209 222 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 LYPD2Q6UXB3 125 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 ZNF580Q9UK33 172 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 Q6ZR03 302 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 COL27A1Q8IZC6 1860 aaPredicted RBP6.08□□□□□ -1.44
HTT-201ENST00000355072 MYCNOSP40205 109 aa6.08□□□□□ -1.44
HTT-201ENST00000355072 IGLV4-3A0A075B6K6 122 aa6.07□□□□□ -1.44
HTT-201ENST00000355072 NUPR1O60356 82 aa6.07□□□□□ -1.44
HTT-201ENST00000355072 CGB7P0DN87 165 aa6.07□□□□□ -1.44
HTT-201ENST00000355072 TFF2Q03403 129 aa6.07□□□□□ -1.44
HTT-201ENST00000355072 RSPO1Q2MKA7 263 aaPredicted RBP6.07□□□□□ -1.44
HTT-201ENST00000355072 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
HTT-201ENST00000355072 IGF1P05019 195 aa6.07□□□□□ -1.44
HTT-201ENST00000355072 FBXL19-AS1Q494R0 122 aa6.07□□□□□ -1.44
HTT-201ENST00000355072 M0R378 163 aa6.06□□□□□ -1.44
HTT-201ENST00000355072 LINC01561Q8N1V8 128 aa6.06□□□□□ -1.44
HTT-201ENST00000355072 IGFL2Q6UWQ7 119 aa6.06□□□□□ -1.44
HTT-201ENST00000355072 E7EQL1 145 aa6.06□□□□□ -1.44
HTT-201ENST00000355072 IGHV3-16A0A0C4DH30 117 aa6.06□□□□□ -1.44
HTT-201ENST00000355072 PLAC8L1A1L4L8 177 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 C11orf53Q8IXP5 236 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 WFDC10AQ9H1F0 79 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 REG3AQ06141 175 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 VWCEQ96DN2 955 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 NTM-AS1Q6ZSK4 140 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 KLLNB2CW77 178 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 RNF144BQ7Z419 303 aa6.05□□□□□ -1.44
HTT-201ENST00000355072 EPOPA6NHQ4 379 aa6.04□□□□□ -1.44
HTT-201ENST00000355072 CHD8Q9HCK8 2581 aa6.04□□□□□ -1.44
HTT-201ENST00000355072 ODF3L1Q8IXM7 274 aa6.04□□□□□ -1.44
HTT-201ENST00000355072 MLANAQ16655 118 aa6.04□□□□□ -1.44
HTT-201ENST00000355072 BRD3OSQ6XYD6 125 aa6.04□□□□□ -1.44
HTT-201ENST00000355072 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 PATE2Q6UY27 113 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 TRBV6-8A0A0A6YYG3 113 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 CCDC179H3BU77 68 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 RNASE13Q5GAN3 156 aaKnown RBP6.03□□□□□ -1.44
HTT-201ENST00000355072 KLK5Q9Y337 293 aaPredicted RBP6.03□□□□□ -1.44
HTT-201ENST00000355072 TMEM254Q8TBM7 123 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 MRPS12O15235 138 aaKnown RBP6.03□□□□□ -1.44
HTT-201ENST00000355072 Q8N814 137 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 LINC00467Q9BRT7 94 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 G3V318 75 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 DEFB112Q30KQ8 113 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 ZNF581Q9P0T4 197 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 IGLV2-11P01706 119 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
HTT-201ENST00000355072 BRI3O95415 125 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 IGFL4Q6B9Z1 124 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 PROK2Q9HC23 129 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 ODF3BA8MYP8 253 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 C9orf85Q96MD7 179 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 LINC00205P59089 165 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 Q8N9W7 124 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 SIRPDQ9H106 197 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 SERTAD4-AS1Q5TG53 156 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 DEFB105AQ8NG35 78 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 IGLV2-8P01709 118 aa6.02□□□□□ -1.45
HTT-201ENST00000355072 IGHV3-38A0A0C4DH36 116 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 C3orf56Q8N813 242 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 PINLYPA6NC86 204 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 IGHV4-28A0A0C4DH34 117 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 C10orf25Q5T742 122 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 CDKN2A-AS1Q9UH64 79 aa6.01□□□□□ -1.45
HTT-201ENST00000355072 EBI3Q14213 229 aa6□□□□□ -1.45
HTT-201ENST00000355072 Q8N3U1 123 aa6□□□□□ -1.45
HTT-201ENST00000355072 IGKV1D-37A0A075B6S9 117 aa6□□□□□ -1.45
HTT-201ENST00000355072 CHCHD10Q8WYQ3 142 aaPredicted RBP6□□□□□ -1.45
HTT-201ENST00000355072 LINC00322Q6ZN03 302 aaPredicted RBP6□□□□□ -1.45
HTT-201ENST00000355072 FAM215AQ9Y5M1 114 aa6□□□□□ -1.45
HTT-201ENST00000355072 ZNRD1Q9P1U0 126 aa6□□□□□ -1.45
HTT-201ENST00000355072 EPG5Q9HCE0 2579 aa6□□□□□ -1.45
HTT-201ENST00000355072 CYP4F30PQ9H0H9 118 aa6□□□□□ -1.45
HTT-201ENST00000355072 C8orf87E5RJ46 101 aa5.99□□□□□ -1.45
HTT-201ENST00000355072 ATP1A1-AS1Q5TC04 95 aa5.99□□□□□ -1.45
HTT-201ENST00000355072 RSPO4Q2I0M5 234 aaPredicted RBP5.99□□□□□ -1.45
HTT-201ENST00000355072 WFDC10BQ8IUB3 73 aa5.99□□□□□ -1.45
HTT-201ENST00000355072 Q9HAA7 133 aa5.99□□□□□ -1.45
HTT-201ENST00000355072 NCR3O14931 201 aa5.99□□□□□ -1.45
HTT-201ENST00000355072 DAZAP2Q15038 168 aaPredicted RBP5.99□□□□□ -1.45
HTT-201ENST00000355072 LINC00269Q8N2A0 174 aa5.99□□□□□ -1.45
HTT-201ENST00000355072 C7orf33Q8WU49 177 aa5.98□□□□□ -1.45
HTT-201ENST00000355072 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
HTT-201ENST00000355072 POLR2KP53803 58 aaKnown RBP5.98□□□□□ -1.45
HTT-201ENST00000355072 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 HRCT1Q6UXD1 115 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 IGIPA6NJ69 53 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 CLPSL2Q6UWE3 100 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 TFF1P04155 84 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 SMIM11BQ8TCY0 68 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 PSMG3-AS1Q96PY0 264 aa5.97□□□□□ -1.45
HTT-201ENST00000355072 AMELXQ99217 191 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms