RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 PRO0255Q9UI72 69 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 A6NDN8 102 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 H3BUT2 72 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 K7ERJ3 54 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 MAPKAPK5-AS1Q8N8E1 139 aa7.92□□□□□ -1.14
SVIP-201ENST00000354193 TRBV6-5A0A0K0K1A5 114 aa7.91□□□□□ -1.14
SVIP-201ENST00000354193 CELA1Q9UNI1 258 aa7.91□□□□□ -1.14
SVIP-201ENST00000354193 SCGB1C2P0DMR2 95 aa7.91□□□□□ -1.14
SVIP-201ENST00000354193 DAZ2Q13117 558 aaKnown RBP7.91□□□□□ -1.14
SVIP-201ENST00000354193 J3QQQ9 107 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 ORAOV1Q8WV07 137 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 IGHV3-30P01768 117 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 IGHV3-33P01772 117 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 IGHV3-30-3P0DP02 117 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 DAZ4Q86SG3 579 aaKnown RBP7.9□□□□□ -1.14
SVIP-201ENST00000354193 DAND5Q8N907 189 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 TIMM17AQ99595 171 aa7.9□□□□□ -1.14
SVIP-201ENST00000354193 DAZ3Q9NR90 486 aaKnown RBP7.9□□□□□ -1.14
SVIP-201ENST00000354193 H3BRM9 83 aa7.9□□□□□ -1.15
SVIP-201ENST00000354193 DNAJC30Q96LL9 226 aa7.9□□□□□ -1.15
SVIP-201ENST00000354193 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 MRPS16Q9Y3D3 137 aaKnown RBP7.89□□□□□ -1.15
SVIP-201ENST00000354193 CDKN2A-AS1Q9UH64 79 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 TENM3Q9P273 2699 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 TRBV10-1A0A0K0K1A3 114 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 PSMB2P49721 201 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 X6R8D5 127 aa7.89□□□□□ -1.15
SVIP-201ENST00000354193 MYMXA0A1B0GTQ4 84 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 LINC01549A6NIU2 74 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 NANOS2P60321 138 aaKnown RBP7.88□□□□□ -1.15
SVIP-201ENST00000354193 HSD52Q0P140 79 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 FHL2Q14192 279 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 BVES-AS1Q5T3Y7 98 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 ANK3Q12955 4377 aaKnown RBP7.88□□□□□ -1.15
SVIP-201ENST00000354193 KRTAP10-11P60412 298 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 A0A0J9YWU9 116 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 CSNK1G2-AS1Q8NCQ2 148 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 NDUFA12Q9UI09 145 aa7.88□□□□□ -1.15
SVIP-201ENST00000354193 MALP21145 153 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 SPANXA1Q9NS26 97 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 PFN2P35080 140 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 UBE2WQ96B02 151 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 TRAV12-1A0A0B4J245 112 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 CIDEAO60543 219 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 SMIM13P0DJ93 91 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 FXYD2P54710 66 aa7.87□□□□□ -1.15
SVIP-201ENST00000354193 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 KIR2DL5BQ8NHK3 375 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 Q9HAA7 133 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 KLK12Q9UKR0 248 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 TRBV6-4A0A1B0GX49 114 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 A8MTW9 85 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 Q6ZTC4 211 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 CHCHD7Q9BUK0 85 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 SMIM9A6NGZ8 99 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 MIFP14174 115 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 UBE2D3P61077 147 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 UBE2D2P62837 147 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 C6orf226Q5I0X4 101 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 AKAP9Q99996 3911 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 NTM-AS1Q6ZSK4 140 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 CLUHP3Q96NS8 147 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 UBE2D4Q9Y2X8 147 aa7.86□□□□□ -1.15
SVIP-201ENST00000354193 TRBV6-8A0A0A6YYG3 113 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 CRPP02741 224 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 ZNF22P17026 224 aaPredicted RBP7.85□□□□□ -1.15
SVIP-201ENST00000354193 MRPL23Q16540 153 aaKnown RBP7.85□□□□□ -1.15
SVIP-201ENST00000354193 LBHQ53QV2 105 aaPredicted RBP7.85□□□□□ -1.15
SVIP-201ENST00000354193 C11orf45Q8TAV5 145 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 ZMAT4Q9H898 229 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 IGLV4-60A0A075B6I1 120 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 GAGE10A6NGK3 116 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 MDFIQ99750 246 aa7.85□□□□□ -1.15
SVIP-201ENST00000354193 LYRM9A8MSI8 78 aa7.84□□□□□ -1.15
SVIP-201ENST00000354193 LINC00158P58513 81 aa7.84□□□□□ -1.15
SVIP-201ENST00000354193 LINC00269Q8N2A0 174 aa7.84□□□□□ -1.15
SVIP-201ENST00000354193 PLAC8L1A1L4L8 177 aa7.84□□□□□ -1.15
SVIP-201ENST00000354193 Q8N3U1 123 aa7.84□□□□□ -1.15
SVIP-201ENST00000354193 Q9H8V8 135 aa7.84□□□□□ -1.15
SVIP-201ENST00000354193 E9PLD3 99 aa7.84□□□□□ -1.16
SVIP-201ENST00000354193 CIRBPQ14011 172 aaKnown RBP7.84□□□□□ -1.16
SVIP-201ENST00000354193 C2orf91Q6ZV80 131 aa7.84□□□□□ -1.16
SVIP-201ENST00000354193 LINC00526Q96FQ7 95 aa7.84□□□□□ -1.16
SVIP-201ENST00000354193 PRSS47A8MTI9 375 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 IGLL5B9A064 214 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 CRYBA4P53673 196 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 ICOSQ9Y6W8 199 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 DEFB131BA0A096LNP1 70 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 RNF183Q96D59 192 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 CCL25O15444 150 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 SS18Q15532 418 aa7.83□□□□□ -1.16
SVIP-201ENST00000354193 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
SVIP-201ENST00000354193 TMEM238LA0A1B0GVL6 79 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms