RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
SMPD4-201ENST00000351288 TMEM141Q96I45 108 aa7.56□□□□□ -1.2
SMPD4-201ENST00000351288 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
SMPD4-201ENST00000351288 GTSF1LQ9H1H1 148 aa7.56□□□□□ -1.2
SMPD4-201ENST00000351288 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
SMPD4-201ENST00000351288 Q6ZUT4 128 aa7.55□□□□□ -1.2
SMPD4-201ENST00000351288 C20orf203Q8NBC4 194 aa7.55□□□□□ -1.2
SMPD4-201ENST00000351288 MRAPQ8TCY5 172 aa7.55□□□□□ -1.2
SMPD4-201ENST00000351288 FSHBP01225 129 aa7.55□□□□□ -1.2
SMPD4-201ENST00000351288 LINC00467Q9BRT7 94 aa7.55□□□□□ -1.2
SMPD4-201ENST00000351288 PRB2P02812 416 aaPredicted RBP7.55□□□□□ -1.2
SMPD4-201ENST00000351288 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.55□□□□□ -1.2
SMPD4-201ENST00000351288 IGLV10-54A0A075B6I4 117 aa7.54□□□□□ -1.2
SMPD4-201ENST00000351288 TRBV7-9A0A0J9YWB2 115 aa7.54□□□□□ -1.2
SMPD4-201ENST00000351288 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
SMPD4-201ENST00000351288 A0A1B0GWB2 263 aa7.54□□□□□ -1.2
SMPD4-201ENST00000351288 TRBV27A0A0K0K1C4 114 aa7.54□□□□□ -1.2
SMPD4-201ENST00000351288 NXPH4O95158 308 aa7.54□□□□□ -1.2
SMPD4-201ENST00000351288 G3V4G9 280 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 C1orf158Q8N1D5 194 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 PDZD2O15018 2839 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 SLC25A29Q8N8R3 303 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 PRIMA1Q86XR5 153 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 NDUFA12Q9UI09 145 aa7.53□□□□□ -1.2
SMPD4-201ENST00000351288 BRI3O95415 125 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 DAD1P61803 113 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 FAM110AQ9BQ89 295 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 A0A1B0GV72 72 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 TSPAN13O95857 204 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 GYPEP15421 78 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 PFN2P35080 140 aa7.52□□□□□ -1.21
SMPD4-201ENST00000351288 IGLV4-3A0A075B6K6 122 aa7.51□□□□□ -1.21
SMPD4-201ENST00000351288 TMEM243Q9BU79 118 aa7.51□□□□□ -1.21
SMPD4-201ENST00000351288 XCL1P47992 114 aa7.51□□□□□ -1.21
SMPD4-201ENST00000351288 TMEM263Q8WUH6 116 aaKnown RBP7.51□□□□□ -1.21
SMPD4-201ENST00000351288 ODF3Q96PU9 254 aa7.51□□□□□ -1.21
SMPD4-201ENST00000351288 K7EQD1 137 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 ZNF22P17026 224 aaPredicted RBP7.5□□□□□ -1.21
SMPD4-201ENST00000351288 CIRBPQ14011 172 aaKnown RBP7.5□□□□□ -1.21
SMPD4-201ENST00000351288 RHOHQ15669 191 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 A4D1N5 150 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 CMC4P56277 68 aaPredicted RBP7.5□□□□□ -1.21
SMPD4-201ENST00000351288 LINC00158P58513 81 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 TRAV25A0A0B4J276 109 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 CFC1BP0CG36 223 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 CFC1P0CG37 223 aa7.5□□□□□ -1.21
SMPD4-201ENST00000351288 PAX4O43316 350 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 FAM222AQ5U5X8 452 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 TIMM17AQ99595 171 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 CDKN2A-AS1Q9UH64 79 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 MUSTN1Q8IVN3 82 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 SPANXB1Q9NS25 103 aaPredicted RBP7.49□□□□□ -1.21
SMPD4-201ENST00000351288 NDUFA11Q86Y39 141 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 POM121L12Q8N7R1 296 aa7.49□□□□□ -1.21
SMPD4-201ENST00000351288 TAL2Q16559 108 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 C10orf126Q8N4M7 172 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 IGHV3-30P01768 117 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 IGHV3-30-5P0DP03 117 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 C16orf74Q96GX8 76 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 Q9H8V8 135 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 TCL1BO95988 128 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 ANGP03950 147 aaKnown RBP7.48□□□□□ -1.21
SMPD4-201ENST00000351288 IGHV3-30-3P0DP02 117 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 Q8N2B8 174 aa7.48□□□□□ -1.21
SMPD4-201ENST00000351288 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 IGLV1-51P01701 117 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 LINC00694P0DN24 101 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 C9orf66Q5T8R8 295 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 AMELXQ99217 191 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 EIF4EBP3O60516 100 aaPredicted RBP7.47□□□□□ -1.21
SMPD4-201ENST00000351288 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
SMPD4-201ENST00000351288 C6orf226Q5I0X4 101 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 SPATA3Q8NHX4 192 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 KRTAP1-1Q07627 177 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
SMPD4-201ENST00000351288 MALP21145 153 aa7.46□□□□□ -1.21
SMPD4-201ENST00000351288 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.21
SMPD4-201ENST00000351288 FAM104AQ969W3 186 aa7.46□□□□□ -1.21
SMPD4-201ENST00000351288 UBE2D1P51668 147 aa7.46□□□□□ -1.22
SMPD4-201ENST00000351288 RNF152Q8N8N0 203 aa7.46□□□□□ -1.22
SMPD4-201ENST00000351288 NFE4Q86UQ8 179 aa7.46□□□□□ -1.22
SMPD4-201ENST00000351288 F8W1H4 67 aa7.45□□□□□ -1.22
SMPD4-201ENST00000351288 ANK3Q12955 4377 aaKnown RBP7.45□□□□□ -1.22
SMPD4-201ENST00000351288 ATP6V0E2Q8NHE4 81 aa7.45□□□□□ -1.22
SMPD4-201ENST00000351288 VSIG2Q96IQ7 327 aa7.45□□□□□ -1.22
SMPD4-201ENST00000351288 PRO0461Q9UI25 63 aa7.45□□□□□ -1.22
SMPD4-201ENST00000351288 J3QR89 54 aa7.45□□□□□ -1.22
SMPD4-201ENST00000351288 TRAV26-1A0A087WT03 109 aa7.44□□□□□ -1.22
SMPD4-201ENST00000351288 RETNQ9HD89 108 aa7.44□□□□□ -1.22
SMPD4-201ENST00000351288 A0A0J9YXY3 114 aa7.44□□□□□ -1.22
SMPD4-201ENST00000351288 GAGE12HA6NDE8 117 aa7.44□□□□□ -1.22
SMPD4-201ENST00000351288 PRO1854Q9UHT4 67 aa7.44□□□□□ -1.22
SMPD4-201ENST00000351288 COX6CP09669 75 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms