RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 XCL2Q9UBD3 114 aa17.05■□□□□ 0.32
USP25-203ENST00000351097 UBE2D4Q9Y2X8 147 aa17.05■□□□□ 0.32
USP25-203ENST00000351097 C2CD3Q4AC94 2353 aa17.04■□□□□ 0.32
USP25-203ENST00000351097 MUSTN1Q8IVN3 82 aa17.04■□□□□ 0.32
USP25-203ENST00000351097 SIGMAR1Q99720 223 aa17.04■□□□□ 0.32
USP25-203ENST00000351097 SPATA25Q9BR10 227 aa17.04■□□□□ 0.32
USP25-203ENST00000351097 A0A0B4J2C4 111 aa17.04■□□□□ 0.32
USP25-203ENST00000351097 RNASE13Q5GAN3 156 aaKnown RBP17.04■□□□□ 0.32
USP25-203ENST00000351097 TMEM263Q8WUH6 116 aaKnown RBP17.03■□□□□ 0.32
USP25-203ENST00000351097 TINCRA0A1B0GVN0 87 aa17.02■□□□□ 0.32
USP25-203ENST00000351097 RS1O15537 224 aa17.02■□□□□ 0.32
USP25-203ENST00000351097 CMC4P56277 68 aaPredicted RBP17.02■□□□□ 0.32
USP25-203ENST00000351097 IGHV1-58A0A0C4DH39 117 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 PF4P02776 101 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 SCGB1C2P0DMR2 95 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 FOXI1Q12951 378 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 LINC00482Q8N8I6 264 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 GTSF1LQ9H1H1 148 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 C19orf73Q9NVV2 129 aa17.02■□□□□ 0.31
USP25-203ENST00000351097 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.01■□□□□ 0.31
USP25-203ENST00000351097 IGKV2-29A2NJV5 120 aaPredicted RBP17.01■□□□□ 0.31
USP25-203ENST00000351097 EIF4EBP3O60516 100 aaPredicted RBP17.01■□□□□ 0.31
USP25-203ENST00000351097 IGHV3-33P01772 117 aa17.01■□□□□ 0.31
USP25-203ENST00000351097 FAM110AQ9BQ89 295 aa17.01■□□□□ 0.31
USP25-203ENST00000351097 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.01■□□□□ 0.31
USP25-203ENST00000351097 C1orf158Q8N1D5 194 aa17.01■□□□□ 0.31
USP25-203ENST00000351097 WFDC10AQ9H1F0 79 aa17.01■□□□□ 0.31
USP25-203ENST00000351097 TRAV8-3A0A0A6YYJ7 113 aa17■□□□□ 0.31
USP25-203ENST00000351097 AZU1P20160 251 aa17■□□□□ 0.31
USP25-203ENST00000351097 Q6ZUT4 128 aa16.99■□□□□ 0.31
USP25-203ENST00000351097 ERG28Q9UKR5 140 aa16.99■□□□□ 0.31
USP25-203ENST00000351097 IGHV3-38A0A0C4DH36 116 aa16.98■□□□□ 0.31
USP25-203ENST00000351097 SBSPONQ8IVN8 264 aa16.98■□□□□ 0.31
USP25-203ENST00000351097 VSIG2Q96IQ7 327 aa16.98■□□□□ 0.31
USP25-203ENST00000351097 LITAFQ99732 161 aa16.98■□□□□ 0.31
USP25-203ENST00000351097 NDUFA12Q9UI09 145 aa16.97■□□□□ 0.31
USP25-203ENST00000351097 SCGB1A1P11684 91 aa16.96■□□□□ 0.31
USP25-203ENST00000351097 IGHV3OR16-12A0A075B7B8 117 aa16.95■□□□□ 0.3
USP25-203ENST00000351097 TEN1Q86WV5 123 aa16.95■□□□□ 0.3
USP25-203ENST00000351097 GIG44P09565 113 aaPredicted RBP16.95■□□□□ 0.3
USP25-203ENST00000351097 SPINK8P0C7L1 97 aa16.94■□□□□ 0.3
USP25-203ENST00000351097 SPANXDQ9BXN6 97 aa16.94■□□□□ 0.3
USP25-203ENST00000351097 GEMIN7Q9H840 131 aaKnown RBP16.94■□□□□ 0.3
USP25-203ENST00000351097 SPANXCQ9NY87 97 aa16.94■□□□□ 0.3
USP25-203ENST00000351097 JMJD1CQ15652 2540 aa16.94■□□□□ 0.3
USP25-203ENST00000351097 H7C2G1 150 aa16.94■□□□□ 0.3
USP25-203ENST00000351097 SMAGPQ0VAQ4 97 aa16.94■□□□□ 0.3
USP25-203ENST00000351097 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.94■□□□□ 0.3
USP25-203ENST00000351097 IL17DQ8TAD2 202 aa16.93■□□□□ 0.3
USP25-203ENST00000351097 PPDPFLQ8WWR9 84 aa16.93■□□□□ 0.3
USP25-203ENST00000351097 PRSS2P07478 247 aa16.91■□□□□ 0.3
USP25-203ENST00000351097 SPATA3Q8NHX4 192 aa16.91■□□□□ 0.3
USP25-203ENST00000351097 RPL35AP18077 110 aaKnown RBP16.91■□□□□ 0.3
USP25-203ENST00000351097 Q1RN00 199 aa16.91■□□□□ 0.3
USP25-203ENST00000351097 ADAMTSL4-AS1Q5T5F5 129 aa16.91■□□□□ 0.3
USP25-203ENST00000351097 ZFAND6Q6FIF0 208 aa16.91■□□□□ 0.3
USP25-203ENST00000351097 TRGV1A0A0A0MS02 117 aa16.9■□□□□ 0.3
USP25-203ENST00000351097 A8MZ25 164 aa16.9■□□□□ 0.3
USP25-203ENST00000351097 TIRAPP58753 221 aa16.9■□□□□ 0.3
USP25-203ENST00000351097 CARD19Q96LW7 228 aa16.9■□□□□ 0.3
USP25-203ENST00000351097 MIAQ16674 131 aa16.89■□□□□ 0.3
USP25-203ENST00000351097 DGAT2L7PQ6IED9 249 aa16.89■□□□□ 0.3
USP25-203ENST00000351097 CITED1Q99966 193 aa16.89■□□□□ 0.29
USP25-203ENST00000351097 FLNBO75369 2602 aaKnown RBP16.88■□□□□ 0.29
USP25-203ENST00000351097 IGLV5-45A0A087WSX0 123 aa16.88■□□□□ 0.29
USP25-203ENST00000351097 CDKN2A-AS1Q9UH64 79 aa16.88■□□□□ 0.29
USP25-203ENST00000351097 M0QXV9 152 aa16.87■□□□□ 0.29
USP25-203ENST00000351097 SLC25A20O43772 301 aa16.87■□□□□ 0.29
USP25-203ENST00000351097 TENM1Q9UKZ4 2725 aa16.87■□□□□ 0.29
USP25-203ENST00000351097 C9JAW5 83 aa16.87■□□□□ 0.29
USP25-203ENST00000351097 ANKRD29Q8N6D5 301 aa16.87■□□□□ 0.29
USP25-203ENST00000351097 TRBV30A0A0K0K1B3 111 aa16.86■□□□□ 0.29
USP25-203ENST00000351097 TIMM17BO60830 172 aa16.86■□□□□ 0.29
USP25-203ENST00000351097 CSNK1G2-AS1Q8NCQ2 148 aa16.85■□□□□ 0.29
USP25-203ENST00000351097 CDIP1Q9H305 208 aa16.85■□□□□ 0.29
USP25-203ENST00000351097 TRBV10-1A0A0K0K1A3 114 aa16.85■□□□□ 0.29
USP25-203ENST00000351097 RPL36AP83881 106 aaKnown RBP16.85■□□□□ 0.29
USP25-203ENST00000351097 ATXN8Q156A1 80 aa16.85■□□□□ 0.29
USP25-203ENST00000351097 RPL36ALQ969Q0 106 aaKnown RBP16.85■□□□□ 0.29
USP25-203ENST00000351097 VWFP04275 2813 aa16.85■□□□□ 0.29
USP25-203ENST00000351097 K7EQD1 137 aa16.84■□□□□ 0.29
USP25-203ENST00000351097 RNF183Q96D59 192 aa16.84■□□□□ 0.29
USP25-203ENST00000351097 TMEM101Q96IK0 257 aa16.84■□□□□ 0.29
USP25-203ENST00000351097 F8P00451 2351 aa16.83■□□□□ 0.29
USP25-203ENST00000351097 NDUFA1O15239 70 aa16.83■□□□□ 0.28
USP25-203ENST00000351097 Q6ZTI0 123 aa16.83■□□□□ 0.28
USP25-203ENST00000351097 TRIAP1O43715 76 aa16.82■□□□□ 0.28
USP25-203ENST00000351097 HERVK_113P63121 156 aa16.82■□□□□ 0.28
USP25-203ENST00000351097 C9orf66Q5T8R8 295 aa16.82■□□□□ 0.28
USP25-203ENST00000351097 TRAV4A0A0B4J268 109 aa16.82■□□□□ 0.28
USP25-203ENST00000351097 COX6A2Q02221 97 aa16.82■□□□□ 0.28
USP25-203ENST00000351097 DAZ2Q13117 558 aaKnown RBP16.82■□□□□ 0.28
USP25-203ENST00000351097 DAZ4Q86SG3 579 aaKnown RBP16.82■□□□□ 0.28
USP25-203ENST00000351097 DAZ3Q9NR90 486 aaKnown RBP16.82■□□□□ 0.28
USP25-203ENST00000351097 LINC00694P0DN24 101 aa16.81■□□□□ 0.28
USP25-203ENST00000351097 IFITM1P13164 125 aa16.81■□□□□ 0.28
USP25-203ENST00000351097 CSDC2Q9Y534 153 aaKnown RBP16.81■□□□□ 0.28
USP25-203ENST00000351097 PLAC8L1A1L4L8 177 aa16.8■□□□□ 0.28
USP25-203ENST00000351097 NPC2P61916 151 aa16.8■□□□□ 0.28
USP25-203ENST00000351097 LINC01620Q4KN68 170 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms