RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF1-202ENST00000347545 IL17DQ8TAD2 202 aa10.47□□□□□ -0.73
ARHGEF1-202ENST00000347545 C1orf158Q8N1D5 194 aa10.46□□□□□ -0.73
ARHGEF1-202ENST00000347545 TRAV4A0A0B4J268 109 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 NDUFA12Q9UI09 145 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 GAGE5Q13069 117 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 GAGE6Q13070 117 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 LRRC75A-AS1Q8N1F1 130 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
ARHGEF1-202ENST00000347545 NHLRC4P0CG21 123 aaPredicted RBP10.44□□□□□ -0.74
ARHGEF1-202ENST00000347545 SETXQ7Z333 2677 aaKnown RBP10.44□□□□□ -0.74
ARHGEF1-202ENST00000347545 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
ARHGEF1-202ENST00000347545 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
ARHGEF1-202ENST00000347545 CCDC179H3BU77 68 aa10.44□□□□□ -0.74
ARHGEF1-202ENST00000347545 C11orf44Q8N8P7 122 aa10.44□□□□□ -0.74
ARHGEF1-202ENST00000347545 SLC25A20O43772 301 aa10.43□□□□□ -0.74
ARHGEF1-202ENST00000347545 COX6A2Q02221 97 aa10.43□□□□□ -0.74
ARHGEF1-202ENST00000347545 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
ARHGEF1-202ENST00000347545 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.43□□□□□ -0.74
ARHGEF1-202ENST00000347545 A0A1W2PRX2 142 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 IGLV5-45A0A087WSX0 123 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 DNAJC9-AS1A6NH13 148 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 TRIAP1O43715 76 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 NPC2P61916 151 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 MIAQ16674 131 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 ESM1Q9NQ30 184 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 WNK1Q9H4A3 2382 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 IGHV3OR16-12A0A075B7B8 117 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 C3orf56Q8N813 242 aa10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 NTN5Q8WTR8 489 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF1-202ENST00000347545 GAGE2BQ13066 116 aa10.41□□□□□ -0.74
ARHGEF1-202ENST00000347545 Q1RN00 199 aa10.41□□□□□ -0.74
ARHGEF1-202ENST00000347545 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
ARHGEF1-202ENST00000347545 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
ARHGEF1-202ENST00000347545 SNCGO76070 127 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 NDUFA7O95182 113 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 PRSS2P07478 247 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 SONP18583 2426 aaKnown RBP10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 TEX49A0A1B0GTD5 131 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 SHISA2Q6UWI4 295 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 SMIM20Q8N5G0 67 aa10.4□□□□□ -0.74
ARHGEF1-202ENST00000347545 TRGV1A0A0A0MS02 117 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 NTM-AS1Q6ZSK4 140 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 Q6ZTI0 123 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 STHQ8IWL8 128 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 TMEM86BQ8N661 226 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 TRBV30A0A0K0K1B3 111 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 M0QXV9 152 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 TIRAPP58753 221 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 DAND5Q8N907 189 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 WFDC11Q8NEX6 87 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 ANK3Q12955 4377 aaKnown RBP10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 NDUFV3P56181 108 aaKnown RBP10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 CITED1Q99966 193 aa10.39□□□□□ -0.75
ARHGEF1-202ENST00000347545 GIG44P09565 113 aaPredicted RBP10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 LINC00242Q5T6M2 205 aa10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 TRAV25A0A0B4J276 109 aa10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 CCL24O00175 119 aa10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 HERV-K104P63124 156 aa10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 TENM4Q6N022 2769 aa10.38□□□□□ -0.75
ARHGEF1-202ENST00000347545 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
ARHGEF1-202ENST00000347545 FLNAP21333 2647 aaKnown RBP10.37□□□□□ -0.75
ARHGEF1-202ENST00000347545 NDUFA1O15239 70 aa10.37□□□□□ -0.75
ARHGEF1-202ENST00000347545 ICOSQ9Y6W8 199 aa10.37□□□□□ -0.75
ARHGEF1-202ENST00000347545 IGLV5-39A0A0G2JS06 123 aa10.37□□□□□ -0.75
ARHGEF1-202ENST00000347545 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
ARHGEF1-202ENST00000347545 TIMM17BO60830 172 aa10.36□□□□□ -0.75
ARHGEF1-202ENST00000347545 ATXN8Q156A1 80 aa10.36□□□□□ -0.75
ARHGEF1-202ENST00000347545 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
ARHGEF1-202ENST00000347545 PDZD2O15018 2839 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 K7EQD1 137 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 CITED2Q99967 270 aaPredicted RBP10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 GAGE12JA6NER3 117 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 GAGE7O76087 117 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 GAGE4Q13068 117 aa10.35□□□□□ -0.75
ARHGEF1-202ENST00000347545 IFITM1P13164 125 aa10.34□□□□□ -0.75
ARHGEF1-202ENST00000347545 DGAT2L7PQ6IED9 249 aa10.34□□□□□ -0.75
ARHGEF1-202ENST00000347545 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
ARHGEF1-202ENST00000347545 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
ARHGEF1-202ENST00000347545 HIST2H2BCQ6DN03 193 aa10.33□□□□□ -0.76
ARHGEF1-202ENST00000347545 CLEC2BQ92478 149 aa10.33□□□□□ -0.76
ARHGEF1-202ENST00000347545 KRTAP1-1Q07627 177 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 Q9H8V8 135 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 NOP10Q9NPE3 64 aaKnown RBP10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 JMJD1CQ15652 2540 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 TRBV10-1A0A0K0K1A3 114 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 TRBV10-2A0A0K0K1G8 114 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 F5H768 121 aa10.32□□□□□ -0.76
ARHGEF1-202ENST00000347545 RPL13AP40429 203 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms