RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MPV17L2Q567V2 206 aa9.47□□□□□ -0.89
CDC42-202ENST00000344548 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
CDC42-202ENST00000344548 HTN3P15516 51 aa9.47□□□□□ -0.89
CDC42-202ENST00000344548 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
CDC42-202ENST00000344548 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
CDC42-202ENST00000344548 K7EIL1 84 aa9.46□□□□□ -0.9
CDC42-202ENST00000344548 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
CDC42-202ENST00000344548 NFE4Q86UQ8 179 aa9.46□□□□□ -0.9
CDC42-202ENST00000344548 TRAV26-1A0A087WT03 109 aa9.45□□□□□ -0.9
CDC42-202ENST00000344548 TRBV6-8A0A0A6YYG3 113 aa9.45□□□□□ -0.9
CDC42-202ENST00000344548 PAX4O43316 350 aa9.45□□□□□ -0.9
CDC42-202ENST00000344548 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
CDC42-202ENST00000344548 ZNF22P17026 224 aaPredicted RBP9.45□□□□□ -0.9
CDC42-202ENST00000344548 TSPEAR-AS2P59090 65 aa9.45□□□□□ -0.9
CDC42-202ENST00000344548 E9PLD3 99 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 F5H768 121 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 ATP5G1P05496 136 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 IGHV3-64A0A075B6Q5 118 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 DLEU1O43261 78 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
CDC42-202ENST00000344548 GAGE6Q13070 117 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
CDC42-202ENST00000344548 HUWE1Q7Z6Z7 4374 aaKnown RBP9.43□□□□□ -0.9
CDC42-202ENST00000344548 IGLV4-60A0A075B6I1 120 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 TRBV25-1A0A075B6N4 114 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 COX6A2Q02221 97 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 DGAT2L7PQ6IED9 249 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
CDC42-202ENST00000344548 CDC42SE2Q9NRR3 84 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 UBE2D1P51668 147 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 MRAPQ8TCY5 172 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
CDC42-202ENST00000344548 A0A0J9YWU9 116 aa9.42□□□□□ -0.9
CDC42-202ENST00000344548 PAPPA-AS1Q5QFB9 102 aa9.42□□□□□ -0.9
CDC42-202ENST00000344548 A0A1B0GV90 55 aa9.42□□□□□ -0.9
CDC42-202ENST00000344548 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
CDC42-202ENST00000344548 CSDC2Q9Y534 153 aaKnown RBP9.42□□□□□ -0.9
CDC42-202ENST00000344548 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
CDC42-202ENST00000344548 NPSP0C0P6 89 aa9.41□□□□□ -0.9
CDC42-202ENST00000344548 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
CDC42-202ENST00000344548 BVES-AS1Q5T3Y7 98 aa9.41□□□□□ -0.9
CDC42-202ENST00000344548 CHCHD5Q9BSY4 110 aa9.41□□□□□ -0.9
CDC42-202ENST00000344548 Q6ZTC4 211 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 Q6ZVH6 145 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 Q8N3U1 123 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 TRAV13-1A0A0B4J241 112 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 UBE2L6O14933 153 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 OR5A1Q8NGJ0 315 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 PLEKHB2Q96CS7 222 aa9.4□□□□□ -0.9
CDC42-202ENST00000344548 K7EP13 123 aa9.39□□□□□ -0.91
CDC42-202ENST00000344548 KPRPQ5T749 579 aaPredicted RBP9.39□□□□□ -0.91
CDC42-202ENST00000344548 MYMXA0A1B0GTQ4 84 aa9.39□□□□□ -0.91
CDC42-202ENST00000344548 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
CDC42-202ENST00000344548 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
CDC42-202ENST00000344548 SIVA1O15304 175 aa9.38□□□□□ -0.91
CDC42-202ENST00000344548 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
CDC42-202ENST00000344548 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
CDC42-202ENST00000344548 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
CDC42-202ENST00000344548 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
CDC42-202ENST00000344548 ZNF815PA8K554 130 aa9.37□□□□□ -0.91
CDC42-202ENST00000344548 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
CDC42-202ENST00000344548 SVIPQ8NHG7 77 aa9.37□□□□□ -0.91
CDC42-202ENST00000344548 J3QQQ9 107 aa9.36□□□□□ -0.91
CDC42-202ENST00000344548 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
CDC42-202ENST00000344548 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
CDC42-202ENST00000344548 H7C423 109 aa9.36□□□□□ -0.91
CDC42-202ENST00000344548 IGHV3-30-3P0DP02 117 aa9.36□□□□□ -0.91
CDC42-202ENST00000344548 HERVK_113P61574 105 aa9.36□□□□□ -0.91
CDC42-202ENST00000344548 TM2D3Q9BRN9 247 aa9.36□□□□□ -0.91
CDC42-202ENST00000344548 GEMIN7Q9H840 131 aaKnown RBP9.35□□□□□ -0.91
CDC42-202ENST00000344548 HIGD1BQ9P298 99 aa9.35□□□□□ -0.91
CDC42-202ENST00000344548 DNHD1Q96M86 4753 aa9.35□□□□□ -0.91
CDC42-202ENST00000344548 IGLV5-45A0A087WSX0 123 aa9.35□□□□□ -0.91
CDC42-202ENST00000344548 TMEM262E9PQX1 116 aa9.35□□□□□ -0.91
CDC42-202ENST00000344548 ZNF25P17030 456 aaPredicted RBP9.35□□□□□ -0.91
CDC42-202ENST00000344548 TMEM101Q96IK0 257 aa9.35□□□□□ -0.91
CDC42-202ENST00000344548 LEPROTO15243 131 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 TIRAPP58753 221 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 RBX1P62877 108 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 FXYD2P54710 66 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 HSD52Q0P140 79 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
CDC42-202ENST00000344548 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 FAM19A3Q7Z5A8 133 aa9.34□□□□□ -0.91
CDC42-202ENST00000344548 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
CDC42-202ENST00000344548 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
CDC42-202ENST00000344548 TEX48A0A1B0GUV7 120 aa9.33□□□□□ -0.92
CDC42-202ENST00000344548 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
CDC42-202ENST00000344548 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
CDC42-202ENST00000344548 ICOSQ9Y6W8 199 aa9.33□□□□□ -0.92
CDC42-202ENST00000344548 LGALS3P17931 250 aaKnown RBP9.32□□□□□ -0.92
CDC42-202ENST00000344548 GCSHP23434 173 aa9.32□□□□□ -0.92
CDC42-202ENST00000344548 SPATA25Q9BR10 227 aa9.31□□□□□ -0.92
CDC42-202ENST00000344548 HERVK_113P63121 156 aa9.31□□□□□ -0.92
CDC42-202ENST00000344548 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms