RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 TENM3Q9P273 2699 aa15.35■□□□□ 0.05
CACNB1-201ENST00000344140 ZC2HC1BQ5TFG8 222 aa15.35■□□□□ 0.05
CACNB1-201ENST00000344140 Q6ZTC4 211 aa15.35■□□□□ 0.05
CACNB1-201ENST00000344140 ICOSQ9Y6W8 199 aa15.35■□□□□ 0.05
CACNB1-201ENST00000344140 H3BNG1 76 aa15.33■□□□□ 0.05
CACNB1-201ENST00000344140 STPG4Q8N801 248 aa15.33■□□□□ 0.05
CACNB1-201ENST00000344140 IGLC3P0DOY3 106 aa15.33■□□□□ 0.04
CACNB1-201ENST00000344140 AMMECR1LQ6DCA0 310 aa15.33■□□□□ 0.04
CACNB1-201ENST00000344140 IGLV4-69A0A075B6H9 119 aa15.32■□□□□ 0.04
CACNB1-201ENST00000344140 DDTP30046 118 aa15.32■□□□□ 0.04
CACNB1-201ENST00000344140 Q6ZUT4 128 aa15.32■□□□□ 0.04
CACNB1-201ENST00000344140 MIEN1Q9BRT3 115 aa15.32■□□□□ 0.04
CACNB1-201ENST00000344140 ZNF25P17030 456 aaPredicted RBP15.31■□□□□ 0.04
CACNB1-201ENST00000344140 NANOS2P60321 138 aaKnown RBP15.31■□□□□ 0.04
CACNB1-201ENST00000344140 OR5A1Q8NGJ0 315 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 TMEM101Q96IK0 257 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 C2orf88Q9BSF0 95 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 CHCHD5Q9BSY4 110 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 A0A096LPF7 62 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 B9D2Q9BPU9 175 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 UQCR10Q9UDW1 63 aa15.31■□□□□ 0.04
CACNB1-201ENST00000344140 ANKRD39Q53RE8 183 aa15.3■□□□□ 0.04
CACNB1-201ENST00000344140 NFE4Q86UQ8 179 aa15.29■□□□□ 0.04
CACNB1-201ENST00000344140 C14orf144Q96I85 54 aa15.29■□□□□ 0.04
CACNB1-201ENST00000344140 C11orf86A6NJI1 115 aa15.29■□□□□ 0.04
CACNB1-201ENST00000344140 GAGE6Q13070 117 aa15.28■□□□□ 0.04
CACNB1-201ENST00000344140 RNASE13Q5GAN3 156 aaKnown RBP15.28■□□□□ 0.04
CACNB1-201ENST00000344140 DEFB131BA0A096LNP1 70 aa15.27■□□□□ 0.04
CACNB1-201ENST00000344140 CDC42SE2Q9NRR3 84 aa15.27■□□□□ 0.04
CACNB1-201ENST00000344140 MEGF8Q7Z7M0 2845 aa15.26■□□□□ 0.03
CACNB1-201ENST00000344140 CHAC1Q9BUX1 264 aa15.26■□□□□ 0.03
CACNB1-201ENST00000344140 A0A0J9YXV3 536 aa15.25■□□□□ 0.03
CACNB1-201ENST00000344140 COX8AP10176 69 aa15.25■□□□□ 0.03
CACNB1-201ENST00000344140 SLC25A34Q6PIV7 304 aa15.25■□□□□ 0.03
CACNB1-201ENST00000344140 TRAV10A0A0B4J240 114 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 LINC00587B1AMM8 73 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 NMUP48645 174 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 UBE2D1P51668 147 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 TIRAPP58753 221 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 A0A1B0GUV1 79 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 TINCRA0A1B0GVN0 87 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 TCTAP57738 103 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 HERVK_113P61574 105 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 TMEM170BQ5T4T1 132 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 LELP1Q5T871 98 aa15.23■□□□□ 0.03
CACNB1-201ENST00000344140 TMEM262E9PQX1 116 aa15.21■□□□□ 0.03
CACNB1-201ENST00000344140 SEC11AP67812 179 aa15.2■□□□□ 0.02
CACNB1-201ENST00000344140 IGKV2D-26A0A0A0MRZ7 120 aa15.2■□□□□ 0.02
CACNB1-201ENST00000344140 E9PLD3 99 aa15.2■□□□□ 0.02
CACNB1-201ENST00000344140 NHLRC4P0CG21 123 aaPredicted RBP15.2■□□□□ 0.02
CACNB1-201ENST00000344140 IGLV4-60A0A075B6I1 120 aa15.19■□□□□ 0.02
CACNB1-201ENST00000344140 DLEU1O43261 78 aa15.19■□□□□ 0.02
CACNB1-201ENST00000344140 ZNF22P17026 224 aaPredicted RBP15.19■□□□□ 0.02
CACNB1-201ENST00000344140 HNRNPA3P51991 378 aaKnown RBP15.19■□□□□ 0.02
CACNB1-201ENST00000344140 LYPD5Q6UWN5 251 aa15.19■□□□□ 0.02
CACNB1-201ENST00000344140 FAM19A3Q7Z5A8 133 aa15.19■□□□□ 0.02
CACNB1-201ENST00000344140 GEMIN7Q9H840 131 aaKnown RBP15.19■□□□□ 0.02
CACNB1-201ENST00000344140 BOD1L2Q8IYS8 172 aa15.18■□□□□ 0.02
CACNB1-201ENST00000344140 HUWE1Q7Z6Z7 4374 aaKnown RBP15.18■□□□□ 0.02
CACNB1-201ENST00000344140 RBX1P62877 108 aa15.18■□□□□ 0.02
CACNB1-201ENST00000344140 TRAV13-1A0A0B4J241 112 aa15.17■□□□□ 0.02
CACNB1-201ENST00000344140 MPV17L2Q567V2 206 aa15.17■□□□□ 0.02
CACNB1-201ENST00000344140 PCP2Q8IVA1 136 aa15.17■□□□□ 0.02
CACNB1-201ENST00000344140 HERVK_113P63121 156 aa15.16■□□□□ 0.02
CACNB1-201ENST00000344140 PRKDCP78527 4128 aaKnown RBP15.16■□□□□ 0.02
CACNB1-201ENST00000344140 DNAH9Q9NYC9 4486 aa15.16■□□□□ 0.02
CACNB1-201ENST00000344140 TMEM223A0PJW6 202 aa15.16■□□□□ 0.02
CACNB1-201ENST00000344140 LINC00242Q5T6M2 205 aa15.15■□□□□ 0.02
CACNB1-201ENST00000344140 MRPS16Q9Y3D3 137 aaKnown RBP15.15■□□□□ 0.02
CACNB1-201ENST00000344140 IGLV5-45A0A087WSX0 123 aa15.14■□□□□ 0.01
CACNB1-201ENST00000344140 LINC00469Q8N7U9 141 aa15.14■□□□□ 0.01
CACNB1-201ENST00000344140 C15orf53Q8NAA6 179 aa15.14■□□□□ 0.01
CACNB1-201ENST00000344140 TRAV8-6A0A0B4J262 113 aa15.14■□□□□ 0.01
CACNB1-201ENST00000344140 FBN3Q75N90 2809 aa15.13■□□□□ 0.01
CACNB1-201ENST00000344140 TP73-AS1Q9UF72 201 aa15.13■□□□□ 0.01
CACNB1-201ENST00000344140 H3BRM9 83 aa15.12■□□□□ 0.01
CACNB1-201ENST00000344140 SIVA1O15304 175 aa15.11■□□□□ 0.01
CACNB1-201ENST00000344140 CTAG1AP78358 180 aa15.11■□□□□ 0.01
CACNB1-201ENST00000344140 CDKN2A-AS1Q9UH64 79 aa15.1■□□□□ 0.01
CACNB1-201ENST00000344140 LEPROTO15243 131 aa15.1■□□□□ 0.01
CACNB1-201ENST00000344140 COX6A2Q02221 97 aa15.1■□□□□ 0.01
CACNB1-201ENST00000344140 TTTY13Q9BZ97 58 aa15.1■□□□□ 0.01
CACNB1-201ENST00000344140 IGKV3OR2-268A0A0C4DH90 116 aa15.09■□□□□ 0.01
CACNB1-201ENST00000344140 PLEKHB2Q96CS7 222 aa15.09■□□□□ 0.01
CACNB1-201ENST00000344140 CCL25O15444 150 aa15.08■□□□□ 0.01
CACNB1-201ENST00000344140 ESRGQ1W209 222 aa15.08■□□□□ 0.01
CACNB1-201ENST00000344140 C2orf91Q6ZV80 131 aa15.08■□□□□ 0.01
CACNB1-201ENST00000344140 MAPKAPK5-AS1Q8N8E1 139 aa15.08■□□□□ 0.01
CACNB1-201ENST00000344140 STAB2Q8WWQ8 2551 aa15.08■□□□□ 0
CACNB1-201ENST00000344140 MYMXA0A1B0GTQ4 84 aa15.08■□□□□ 0
CACNB1-201ENST00000344140 LINC00959A0A1B0GUT2 108 aa15.08■□□□□ 0
CACNB1-201ENST00000344140 J3QQQ9 107 aa15.08■□□□□ 0
CACNB1-201ENST00000344140 ANGP03950 147 aaKnown RBP15.08■□□□□ 0
CACNB1-201ENST00000344140 IGHV1-58A0A0C4DH39 117 aa15.07■□□□□ 0
CACNB1-201ENST00000344140 LGALS3P17931 250 aaKnown RBP15.06■□□□□ 0
CACNB1-201ENST00000344140 SS18Q15532 418 aa15.06■□□□□ 0
CACNB1-201ENST00000344140 LINC00269Q8N2A0 174 aa15.06■□□□□ 0
CACNB1-201ENST00000344140 COL7A1Q02388 2944 aa15.05■□□□□ 0
CACNB1-201ENST00000344140 IGHV3-64A0A075B6Q5 118 aa15.05■□□□□ -0
CACNB1-201ENST00000344140 ZNF815PA8K554 130 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms