RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 NDUFA12Q9UI09 145 aa5.05□□□□□ -1.6
FCF1-201ENST00000341162 CMYA5Q8N3K9 4069 aa5.05□□□□□ -1.6
FCF1-201ENST00000341162 FHL2Q14192 279 aa5.05□□□□□ -1.6
FCF1-201ENST00000341162 DEFB121Q5J5C9 76 aa5.05□□□□□ -1.6
FCF1-201ENST00000341162 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
FCF1-201ENST00000341162 PGPEP1Q9NXJ5 209 aa5.05□□□□□ -1.6
FCF1-201ENST00000341162 SPTBN4Q9H254 2564 aa5.05□□□□□ -1.6
FCF1-201ENST00000341162 XCL2Q9UBD3 114 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 PKIGQ9Y2B9 76 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 IGHV3OR16-12A0A075B7B8 117 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 MIFP14174 115 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 LINC00242Q5T6M2 205 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 USP24Q9UPU5 2620 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 CRLF1O75462 422 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 TTTY13Q9BZ97 58 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 TRBV6-8A0A0A6YYG3 113 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 H3BT86 120 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 RPL13AP40429 203 aaKnown RBP5.04□□□□□ -1.6
FCF1-201ENST00000341162 CXCL5P42830 114 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 ATXN8Q156A1 80 aa5.04□□□□□ -1.6
FCF1-201ENST00000341162 CUBNO60494 3623 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 LRBAP50851 2863 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 SMIM1B2RUZ4 78 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 F8WDY8 70 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 LY6G6DO95868 133 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 RAB37Q96AX2 223 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 ERG28Q9UKR5 140 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 ABCA12Q86UK0 2595 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 SONP18583 2426 aaKnown RBP5.03□□□□□ -1.6
FCF1-201ENST00000341162 UBE2L6O14933 153 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
FCF1-201ENST00000341162 NTM-AS1Q6ZSK4 140 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 Q6ZTI0 123 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 CCDC168Q8NDH2 2452 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 MRPL23Q16540 153 aaKnown RBP5.03□□□□□ -1.6
FCF1-201ENST00000341162 DGAT2L7PQ6IED9 249 aa5.03□□□□□ -1.6
FCF1-201ENST00000341162 K7ERJ3 54 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 X6R8D5 127 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 NBEAQ8NFP9 2946 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 ANK2Q01484 3957 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 FLNBO75369 2602 aaKnown RBP5.02□□□□□ -1.61
FCF1-201ENST00000341162 TEN1Q86WV5 123 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 PPDPFLQ8WWR9 84 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 PRO0255Q9UI72 69 aa5.02□□□□□ -1.61
FCF1-201ENST00000341162 A0A087WZ39 114 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 A4D1N5 150 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 COX6CP09669 75 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 KRTAP10-3P60369 221 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 COX17Q14061 63 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 C21orf62-AS1Q17RA5 79 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 MUSTN1Q8IVN3 82 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 NOP10Q9NPE3 64 aaKnown RBP5.01□□□□□ -1.61
FCF1-201ENST00000341162 LOC100131303A0A0U1RQF7 123 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 IBA57-AS1B1ANH7 110 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 CFAP46Q8IYW2 2715 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.01□□□□□ -1.61
FCF1-201ENST00000341162 IGKV2-29A2NJV5 120 aaPredicted RBP5.01□□□□□ -1.61
FCF1-201ENST00000341162 TMEM262E9PQX1 116 aa5.01□□□□□ -1.61
FCF1-201ENST00000341162 ANKRD17O75179 2603 aaKnown RBP5□□□□□ -1.61
FCF1-201ENST00000341162 FAM240AA0A1B0GVK7 77 aa5□□□□□ -1.61
FCF1-201ENST00000341162 A0A1B0GX51 115 aa5□□□□□ -1.61
FCF1-201ENST00000341162 C11orf68Q9H3H3 251 aaKnown RBP5□□□□□ -1.61
FCF1-201ENST00000341162 TRGV4A0A0C4DH28 118 aa5□□□□□ -1.61
FCF1-201ENST00000341162 APOMO95445 188 aa5□□□□□ -1.61
FCF1-201ENST00000341162 OPRPNQ99935 248 aaPredicted RBP5□□□□□ -1.61
FCF1-201ENST00000341162 TRGV2A0A075B6R0 118 aa5□□□□□ -1.61
FCF1-201ENST00000341162 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
FCF1-201ENST00000341162 TRBV10-2A0A0K0K1G8 114 aa5□□□□□ -1.61
FCF1-201ENST00000341162 Q8IZM0 81 aa5□□□□□ -1.61
FCF1-201ENST00000341162 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
FCF1-201ENST00000341162 C2orf82Q6UX34 121 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 FBN2P35556 2912 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 TRACP01848 142 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 ICOSQ9Y6W8 199 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 COX7B2Q8TF08 81 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 IGHV3-73A0A0B4J1V6 119 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 IGHV3OR16-9A0A0B4J2B5 98 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 IGHV4-28A0A0C4DH34 117 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 H3BQ85 93 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 EGFEM1PQ0D2K5 195 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 FOXI1Q12951 378 aa4.99□□□□□ -1.61
FCF1-201ENST00000341162 NAV2Q8IVL1 2488 aa4.98□□□□□ -1.61
FCF1-201ENST00000341162 LST1O00453 97 aa4.98□□□□□ -1.61
FCF1-201ENST00000341162 EIF4EBP3O60516 100 aaPredicted RBP4.98□□□□□ -1.61
FCF1-201ENST00000341162 NDUFC2O95298 119 aa4.98□□□□□ -1.61
FCF1-201ENST00000341162 TCL1BO95988 128 aa4.98□□□□□ -1.61
FCF1-201ENST00000341162 USP9XQ93008 2570 aaPredicted RBP4.98□□□□□ -1.61
FCF1-201ENST00000341162 ZFYVE26Q68DK2 2539 aa4.98□□□□□ -1.61
FCF1-201ENST00000341162 SPINK8P0C7L1 97 aa4.98□□□□□ -1.61
FCF1-201ENST00000341162 GAGE12JA6NER3 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 PRSS2P07478 247 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 GAGE4Q13068 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 GAGE5Q13069 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 GAGE7O76087 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 GAGE12FP0CL80 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 GAGE12GP0CL81 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 GAGE12IP0CL82 117 aa4.97□□□□□ -1.61
FCF1-201ENST00000341162 RPL28P46779 137 aaKnown RBP4.97□□□□□ -1.61
FCF1-201ENST00000341162 SS18Q15532 418 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms