RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 CCL24O00175 119 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 GTSF1LQ9H1H1 148 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 SPANXCQ9NY87 97 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 ERG28Q9UKR5 140 aa10.48□□□□□ -0.73
TDP2-201ENST00000341060 MTORP42345 2549 aa10.47□□□□□ -0.73
TDP2-201ENST00000341060 A0A1W2PRX2 142 aa10.47□□□□□ -0.73
TDP2-201ENST00000341060 SPINK8P0C7L1 97 aa10.47□□□□□ -0.73
TDP2-201ENST00000341060 TEN1Q86WV5 123 aa10.47□□□□□ -0.73
TDP2-201ENST00000341060 C11orf44Q8N8P7 122 aa10.47□□□□□ -0.73
TDP2-201ENST00000341060 GEMIN7Q9H840 131 aaKnown RBP10.47□□□□□ -0.73
TDP2-201ENST00000341060 ESM1Q9NQ30 184 aa10.47□□□□□ -0.73
TDP2-201ENST00000341060 IGHV3OR16-12A0A075B7B8 117 aa10.46□□□□□ -0.73
TDP2-201ENST00000341060 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.73
TDP2-201ENST00000341060 IGLV5-45A0A087WSX0 123 aa10.46□□□□□ -0.74
TDP2-201ENST00000341060 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.74
TDP2-201ENST00000341060 SCGB1A1P11684 91 aa10.45□□□□□ -0.74
TDP2-201ENST00000341060 TIRAPP58753 221 aa10.45□□□□□ -0.74
TDP2-201ENST00000341060 ADAMTSL4-AS1Q5T5F5 129 aa10.45□□□□□ -0.74
TDP2-201ENST00000341060 SETXQ7Z333 2677 aaKnown RBP10.45□□□□□ -0.74
TDP2-201ENST00000341060 A8MZ25 164 aa10.45□□□□□ -0.74
TDP2-201ENST00000341060 MIAQ16674 131 aa10.45□□□□□ -0.74
TDP2-201ENST00000341060 CDKN2A-AS1Q9UH64 79 aa10.45□□□□□ -0.74
TDP2-201ENST00000341060 TRBV10-1A0A0K0K1A3 114 aa10.44□□□□□ -0.74
TDP2-201ENST00000341060 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
TDP2-201ENST00000341060 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
TDP2-201ENST00000341060 PPDPFLQ8WWR9 84 aa10.44□□□□□ -0.74
TDP2-201ENST00000341060 SMR3AQ99954 134 aa10.44□□□□□ -0.74
TDP2-201ENST00000341060 H7C2G1 150 aa10.43□□□□□ -0.74
TDP2-201ENST00000341060 K7EQD1 137 aa10.43□□□□□ -0.74
TDP2-201ENST00000341060 PRSS2P07478 247 aa10.43□□□□□ -0.74
TDP2-201ENST00000341060 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
TDP2-201ENST00000341060 Q1RN00 199 aa10.43□□□□□ -0.74
TDP2-201ENST00000341060 Q6ZTI0 123 aa10.43□□□□□ -0.74
TDP2-201ENST00000341060 CITED2Q99967 270 aaPredicted RBP10.43□□□□□ -0.74
TDP2-201ENST00000341060 TRAV4A0A0B4J268 109 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 TRBV30A0A0K0K1B3 111 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 M0QXV9 152 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 TIMM17BO60830 172 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 YAE1D1Q9NRH1 226 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 CSDC2Q9Y534 153 aaKnown RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 BAHCC1Q9P281 2608 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 SLC25A20O43772 301 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 HERVK_113P63121 156 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 DAZ2Q13117 558 aaKnown RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 FAM19A3Q7Z5A8 133 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 RNF183Q96D59 192 aa10.42□□□□□ -0.74
TDP2-201ENST00000341060 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
TDP2-201ENST00000341060 ANK3Q12955 4377 aaKnown RBP10.41□□□□□ -0.74
TDP2-201ENST00000341060 NDUFA1O15239 70 aa10.41□□□□□ -0.74
TDP2-201ENST00000341060 LINC00694P0DN24 101 aa10.41□□□□□ -0.74
TDP2-201ENST00000341060 ANKRD29Q8N6D5 301 aa10.41□□□□□ -0.74
TDP2-201ENST00000341060 TMEM101Q96IK0 257 aa10.41□□□□□ -0.74
TDP2-201ENST00000341060 HIVEP1P15822 2718 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
TDP2-201ENST00000341060 IGLV5-39A0A0G2JS06 123 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 C9JAW5 83 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 TRIAP1O43715 76 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 COX6A2Q02221 97 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 ATXN8Q156A1 80 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 LINC01006Q8NI28 216 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 CDIP1Q9H305 208 aa10.4□□□□□ -0.74
TDP2-201ENST00000341060 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
TDP2-201ENST00000341060 IFITM1P13164 125 aa10.39□□□□□ -0.75
TDP2-201ENST00000341060 CMC4P56277 68 aaPredicted RBP10.39□□□□□ -0.75
TDP2-201ENST00000341060 JMJD1CQ15652 2540 aa10.39□□□□□ -0.75
TDP2-201ENST00000341060 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
TDP2-201ENST00000341060 FAM110AQ9BQ89 295 aa10.39□□□□□ -0.75
TDP2-201ENST00000341060 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
TDP2-201ENST00000341060 NOTCH3Q9UM47 2321 aa10.38□□□□□ -0.75
TDP2-201ENST00000341060 SETD2Q9BYW2 2564 aaPredicted RBP10.38□□□□□ -0.75
TDP2-201ENST00000341060 RNASE1P07998 156 aaKnown RBP10.38□□□□□ -0.75
TDP2-201ENST00000341060 C16orf74Q96GX8 76 aa10.38□□□□□ -0.75
TDP2-201ENST00000341060 NOP10Q9NPE3 64 aaKnown RBP10.38□□□□□ -0.75
TDP2-201ENST00000341060 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
TDP2-201ENST00000341060 PLAC8L1A1L4L8 177 aa10.37□□□□□ -0.75
TDP2-201ENST00000341060 NPC2P61916 151 aa10.37□□□□□ -0.75
TDP2-201ENST00000341060 IGLV1-51P01701 117 aa10.37□□□□□ -0.75
TDP2-201ENST00000341060 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
TDP2-201ENST00000341060 LINC01600Q96MT4 127 aa10.37□□□□□ -0.75
TDP2-201ENST00000341060 CDC42SE2Q9NRR3 84 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 GAGE12JA6NER3 117 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 NDUFA7O95182 113 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 GAGE4Q13068 117 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 GAGE5Q13069 117 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
TDP2-201ENST00000341060 DAND5Q8N907 189 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 Q9H8V8 135 aa10.36□□□□□ -0.75
TDP2-201ENST00000341060 C19orf73Q9NVV2 129 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms