RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ZNF73O43830 326 aaPredicted RBP12.38□□□□□ -0.43
CDK11B-201ENST00000340677 IGLV2-23P01705 113 aa12.38□□□□□ -0.43
CDK11B-201ENST00000340677 PRB4P10163 310 aaPredicted RBP12.38□□□□□ -0.43
CDK11B-201ENST00000340677 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
CDK11B-201ENST00000340677 C10orf55Q5SWW7 151 aa12.38□□□□□ -0.43
CDK11B-201ENST00000340677 VMO1Q7Z5L0 202 aa12.38□□□□□ -0.43
CDK11B-201ENST00000340677 TRBV6-1A0A0K0K1D8 114 aa12.37□□□□□ -0.43
CDK11B-201ENST00000340677 MRPL36Q9P0J6 103 aaKnown RBP12.37□□□□□ -0.43
CDK11B-201ENST00000340677 TRAV7A0A075B6U4 112 aa12.37□□□□□ -0.43
CDK11B-201ENST00000340677 ESRGQ1W209 222 aa12.37□□□□□ -0.43
CDK11B-201ENST00000340677 DNAL4O96015 105 aa12.36□□□□□ -0.43
CDK11B-201ENST00000340677 TRBV12-3P01733 135 aa12.36□□□□□ -0.43
CDK11B-201ENST00000340677 FAM222AQ5U5X8 452 aa12.36□□□□□ -0.43
CDK11B-201ENST00000340677 HECTD1Q9ULT8 2610 aa12.35□□□□□ -0.43
CDK11B-201ENST00000340677 PAPPA-AS1Q5QFB9 102 aa12.35□□□□□ -0.43
CDK11B-201ENST00000340677 PTPN13Q12923 2485 aa12.35□□□□□ -0.43
CDK11B-201ENST00000340677 NAV3Q8IVL0 2385 aa12.35□□□□□ -0.43
CDK11B-201ENST00000340677 BAALC-AS2P0C853 105 aa12.35□□□□□ -0.43
CDK11B-201ENST00000340677 TOMM6Q96B49 74 aa12.35□□□□□ -0.43
CDK11B-201ENST00000340677 DCHS2Q6V1P9 2916 aa12.34□□□□□ -0.43
CDK11B-201ENST00000340677 IGHV4-61A0A0C4DH41 118 aa12.34□□□□□ -0.43
CDK11B-201ENST00000340677 IGLV4-69A0A075B6H9 119 aa12.34□□□□□ -0.43
CDK11B-201ENST00000340677 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
CDK11B-201ENST00000340677 SPTAN1Q13813 2472 aaKnown RBP12.34□□□□□ -0.43
CDK11B-201ENST00000340677 IGKV1D-37A0A075B6S9 117 aa12.33□□□□□ -0.44
CDK11B-201ENST00000340677 IGHV4-30-2A0A087WSY4 118 aa12.33□□□□□ -0.44
CDK11B-201ENST00000340677 IGHV3-21A0A0B4J1V1 117 aa12.33□□□□□ -0.44
CDK11B-201ENST00000340677 NDUFC1O43677 76 aa12.33□□□□□ -0.44
CDK11B-201ENST00000340677 EGR2P11161 476 aaPredicted RBP12.33□□□□□ -0.44
CDK11B-201ENST00000340677 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
CDK11B-201ENST00000340677 ERHP84090 104 aaKnown RBP12.32□□□□□ -0.44
CDK11B-201ENST00000340677 WFDC9Q8NEX5 89 aa12.32□□□□□ -0.44
CDK11B-201ENST00000340677 AKAP6Q13023 2319 aa12.32□□□□□ -0.44
CDK11B-201ENST00000340677 APELAP0DMC3 54 aa12.32□□□□□ -0.44
CDK11B-201ENST00000340677 BLCAPP62952 87 aa12.31□□□□□ -0.44
CDK11B-201ENST00000340677 MRGPRG-AS1Q2M3A8 158 aa12.31□□□□□ -0.44
CDK11B-201ENST00000340677 NPBQ8NG41 125 aa12.31□□□□□ -0.44
CDK11B-201ENST00000340677 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
CDK11B-201ENST00000340677 Q6ZVQ6 151 aa12.31□□□□□ -0.44
CDK11B-201ENST00000340677 ABCA2Q9BZC7 2435 aa12.3□□□□□ -0.44
CDK11B-201ENST00000340677 IGHV3-72A0A0B4J1Y9 119 aa12.3□□□□□ -0.44
CDK11B-201ENST00000340677 A8MU10 97 aa12.3□□□□□ -0.44
CDK11B-201ENST00000340677 SUB1P53999 127 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDK11B-201ENST00000340677 PRB3Q04118 309 aaPredicted RBP12.3□□□□□ -0.44
CDK11B-201ENST00000340677 NDUFS5O43920 106 aa12.29□□□□□ -0.44
CDK11B-201ENST00000340677 DOPEY2Q9Y3R5 2298 aa12.29□□□□□ -0.44
CDK11B-201ENST00000340677 IGIPA6NJ69 53 aa12.29□□□□□ -0.44
CDK11B-201ENST00000340677 B4DSR2 109 aa12.29□□□□□ -0.44
CDK11B-201ENST00000340677 Q8N6K4 173 aa12.29□□□□□ -0.44
CDK11B-201ENST00000340677 WNK2Q9Y3S1 2297 aa12.28□□□□□ -0.44
CDK11B-201ENST00000340677 A0A096LNT2 108 aa12.28□□□□□ -0.44
CDK11B-201ENST00000340677 MSMBP08118 114 aa12.28□□□□□ -0.44
CDK11B-201ENST00000340677 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
CDK11B-201ENST00000340677 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
CDK11B-201ENST00000340677 LRRK2Q5S007 2527 aa12.27□□□□□ -0.44
CDK11B-201ENST00000340677 RNASE4P34096 147 aaKnown RBP12.27□□□□□ -0.45
CDK11B-201ENST00000340677 RPL27AP46776 148 aaKnown RBP12.27□□□□□ -0.45
CDK11B-201ENST00000340677 MIFP14174 115 aa12.26□□□□□ -0.45
CDK11B-201ENST00000340677 A8MUN3 132 aa12.26□□□□□ -0.45
CDK11B-201ENST00000340677 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
CDK11B-201ENST00000340677 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
CDK11B-201ENST00000340677 BCE1O60756 84 aa12.25□□□□□ -0.45
CDK11B-201ENST00000340677 FAM19A3Q7Z5A8 133 aa12.25□□□□□ -0.45
CDK11B-201ENST00000340677 ZNF575Q86XF7 245 aa12.25□□□□□ -0.45
CDK11B-201ENST00000340677 THAP8Q8NA92 274 aa12.25□□□□□ -0.45
CDK11B-201ENST00000340677 COX7A2LO14548 114 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 KRTAP10-9P60411 292 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 Q1T7F1 81 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 C2orf66Q6UXQ4 117 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 LINC01356Q8N9X3 169 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 CNFNQ9BYD5 112 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 SMIM2Q9BVW6 85 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 C14orf132Q9NPU4 83 aa12.24□□□□□ -0.45
CDK11B-201ENST00000340677 COL12A1Q99715 3063 aa12.23□□□□□ -0.45
CDK11B-201ENST00000340677 NDPQ00604 133 aa12.23□□□□□ -0.45
CDK11B-201ENST00000340677 Q6ZRP5 223 aa12.22□□□□□ -0.45
CDK11B-201ENST00000340677 A0A0J9YXY3 114 aa12.22□□□□□ -0.45
CDK11B-201ENST00000340677 F6UB75 175 aa12.22□□□□□ -0.45
CDK11B-201ENST00000340677 SDHAF1A6NFY7 115 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 UBE2L6O14933 153 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 ENHOQ6UWT2 76 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 PHF5AQ7RTV0 110 aaKnown RBP12.21□□□□□ -0.45
CDK11B-201ENST00000340677 LITAFQ99732 161 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.21□□□□□ -0.458e-7■■■■■ 37.5
CDK11B-201ENST00000340677 USP9YO00507 2555 aaPredicted RBP12.21□□□□□ -0.45
CDK11B-201ENST00000340677 LEPROTO15243 131 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 UBE2BP63146 152 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 MDFIQ99750 246 aa12.21□□□□□ -0.45
CDK11B-201ENST00000340677 ABCA1O95477 2261 aa12.21□□□□□ -0.46
CDK11B-201ENST00000340677 CR1P17927 2039 aa12.21□□□□□ -0.46
CDK11B-201ENST00000340677 PSPHP1O15172 72 aa12.2□□□□□ -0.46
CDK11B-201ENST00000340677 LYZP61626 148 aa12.2□□□□□ -0.46
CDK11B-201ENST00000340677 MED13LQ71F56 2210 aa12.2□□□□□ -0.46
CDK11B-201ENST00000340677 SPG11Q96JI7 2443 aa12.2□□□□□ -0.46
CDK11B-201ENST00000340677 ANKRD17O75179 2603 aaKnown RBP12.2□□□□□ -0.46
CDK11B-201ENST00000340677 A0A0J9YX75 114 aa12.19□□□□□ -0.46
CDK11B-201ENST00000340677 FUSP35637 526 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDK11B-201ENST00000340677 ATP5EP2Q5VTU8 51 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms