RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FGF6P10767 208 aa14.76□□□□□ -0.05
VRK2-201ENST00000340157 TMEM243Q9BU79 118 aa14.76□□□□□ -0.05
VRK2-201ENST00000340157 A0A096LPF7 62 aa14.75□□□□□ -0.05
VRK2-201ENST00000340157 MRPL52Q86TS9 123 aaKnown RBP14.75□□□□□ -0.05
VRK2-201ENST00000340157 SPATA25Q9BR10 227 aa14.75□□□□□ -0.05
VRK2-201ENST00000340157 TRBV25-1A0A075B6N4 114 aa14.74□□□□□ -0.05
VRK2-201ENST00000340157 MRPS36P82909 103 aaKnown RBP14.74□□□□□ -0.05
VRK2-201ENST00000340157 PAPPA-AS1Q5QFB9 102 aa14.74□□□□□ -0.05
VRK2-201ENST00000340157 COX8AP10176 69 aa14.73□□□□□ -0.05
VRK2-201ENST00000340157 Q6ZTC4 211 aa14.73□□□□□ -0.05
VRK2-201ENST00000340157 CSDC2Q9Y534 153 aaKnown RBP14.72□□□□□ -0.05
VRK2-201ENST00000340157 NFE4Q86UQ8 179 aa14.72□□□□□ -0.05
VRK2-201ENST00000340157 A0A0J9YXV3 536 aa14.71□□□□□ -0.05
VRK2-201ENST00000340157 TMEM97Q5BJF2 176 aa14.7□□□□□ -0.06
VRK2-201ENST00000340157 PCP2Q8IVA1 136 aa14.7□□□□□ -0.06
VRK2-201ENST00000340157 H7C423 109 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 NMUP48645 174 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 NANOS2P60321 138 aaKnown RBP14.69□□□□□ -0.06
VRK2-201ENST00000340157 GAGE6Q13070 117 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 DGAT2L7PQ6IED9 249 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 SLC25A34Q6PIV7 304 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 CHAC1Q9BUX1 264 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 UBE2L6O14933 153 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 TTTY13Q9BZ97 58 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 COL7A1Q02388 2944 aa14.69□□□□□ -0.06
VRK2-201ENST00000340157 CDC42SE2Q9NRR3 84 aa14.68□□□□□ -0.06
VRK2-201ENST00000340157 DEFA6Q01524 100 aa14.67□□□□□ -0.06
VRK2-201ENST00000340157 CHCHD5Q9BSY4 110 aa14.67□□□□□ -0.06
VRK2-201ENST00000340157 DNAH9Q9NYC9 4486 aa14.67□□□□□ -0.06
VRK2-201ENST00000340157 HNRNPA3P51991 378 aaKnown RBP14.67□□□□□ -0.06
VRK2-201ENST00000340157 BOD1L2Q8IYS8 172 aa14.67□□□□□ -0.06
VRK2-201ENST00000340157 C11orf45Q8TAV5 145 aa14.67□□□□□ -0.06
VRK2-201ENST00000340157 ZNF22P17026 224 aaPredicted RBP14.66□□□□□ -0.06
VRK2-201ENST00000340157 UBE2D1P51668 147 aa14.66□□□□□ -0.06
VRK2-201ENST00000340157 MRPL23Q16540 153 aaKnown RBP14.66□□□□□ -0.06
VRK2-201ENST00000340157 AMMECR1LQ6DCA0 310 aa14.66□□□□□ -0.06
VRK2-201ENST00000340157 OR5A1Q8NGJ0 315 aa14.66□□□□□ -0.06
VRK2-201ENST00000340157 IGLV4-60A0A075B6I1 120 aa14.65□□□□□ -0.06
VRK2-201ENST00000340157 CTAG1AP78358 180 aa14.65□□□□□ -0.06
VRK2-201ENST00000340157 ICOSQ9Y6W8 199 aa14.65□□□□□ -0.06
VRK2-201ENST00000340157 TMEM170BQ5T4T1 132 aa14.65□□□□□ -0.06
VRK2-201ENST00000340157 C2orf91Q6ZV80 131 aa14.65□□□□□ -0.06
VRK2-201ENST00000340157 C2orf88Q9BSF0 95 aa14.65□□□□□ -0.06
VRK2-201ENST00000340157 E9PLD3 99 aa14.64□□□□□ -0.07
VRK2-201ENST00000340157 ZNF25P17030 456 aaPredicted RBP14.64□□□□□ -0.07
VRK2-201ENST00000340157 SMAGPQ0VAQ4 97 aa14.63□□□□□ -0.07
VRK2-201ENST00000340157 DLEU1O43261 78 aa14.63□□□□□ -0.07
VRK2-201ENST00000340157 MAPKAPK5-AS1Q8N8E1 139 aa14.63□□□□□ -0.07
VRK2-201ENST00000340157 TINCRA0A1B0GVN0 87 aa14.62□□□□□ -0.07
VRK2-201ENST00000340157 TMEM101Q96IK0 257 aa14.62□□□□□ -0.07
VRK2-201ENST00000340157 MRPS16Q9Y3D3 137 aaKnown RBP14.62□□□□□ -0.07
VRK2-201ENST00000340157 TMEM223A0PJW6 202 aa14.61□□□□□ -0.07
VRK2-201ENST00000340157 H3BNG1 76 aa14.61□□□□□ -0.07
VRK2-201ENST00000340157 TRAV8-6A0A0B4J262 113 aa14.61□□□□□ -0.07
VRK2-201ENST00000340157 EREGO14944 169 aa14.61□□□□□ -0.07
VRK2-201ENST00000340157 DEFB131BA0A096LNP1 70 aa14.6□□□□□ -0.07
VRK2-201ENST00000340157 MPV17L2Q567V2 206 aa14.6□□□□□ -0.07
VRK2-201ENST00000340157 LINC00242Q5T6M2 205 aa14.6□□□□□ -0.07
VRK2-201ENST00000340157 SNHG12Q9BXW3 62 aa14.6□□□□□ -0.07
VRK2-201ENST00000340157 COX6A2Q02221 97 aa14.59□□□□□ -0.07
VRK2-201ENST00000340157 SH2D6Q7Z4S9 175 aa14.59□□□□□ -0.07
VRK2-201ENST00000340157 FAM19A3Q7Z5A8 133 aa14.59□□□□□ -0.07
VRK2-201ENST00000340157 TRAV13-1A0A0B4J241 112 aa14.59□□□□□ -0.07
VRK2-201ENST00000340157 TSPEAR-AS2P59090 65 aa14.59□□□□□ -0.07
VRK2-201ENST00000340157 RBX1P62877 108 aa14.59□□□□□ -0.07
VRK2-201ENST00000340157 Q8N3U1 123 aa14.58□□□□□ -0.08
VRK2-201ENST00000340157 IGLV5-45A0A087WSX0 123 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 A0A1B0GUV1 79 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 TIRAPP58753 221 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 HERVK_113P61574 105 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 B9D2Q9BPU9 175 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 TMEM262E9PQX1 116 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 KRTAP21-3Q3LHN1 58 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 LYPD5Q6UWN5 251 aa14.57□□□□□ -0.08
VRK2-201ENST00000340157 LELP1Q5T871 98 aa14.56□□□□□ -0.08
VRK2-201ENST00000340157 CDKN2A-AS1Q9UH64 79 aa14.56□□□□□ -0.08
VRK2-201ENST00000340157 LINC00469Q8N7U9 141 aa14.55□□□□□ -0.08
VRK2-201ENST00000340157 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
VRK2-201ENST00000340157 STAB2Q8WWQ8 2551 aa14.55□□□□□ -0.08
VRK2-201ENST00000340157 IGHV3-64A0A075B6Q5 118 aa14.55□□□□□ -0.08
VRK2-201ENST00000340157 TRAV8-3A0A0A6YYJ7 113 aa14.54□□□□□ -0.08
VRK2-201ENST00000340157 SIVA1O15304 175 aa14.54□□□□□ -0.08
VRK2-201ENST00000340157 M0R143 59 aa14.53□□□□□ -0.08
VRK2-201ENST00000340157 PRKDCP78527 4128 aaKnown RBP14.53□□□□□ -0.08
VRK2-201ENST00000340157 MYMXA0A1B0GTQ4 84 aa14.52□□□□□ -0.08
VRK2-201ENST00000340157 HERVK_113P63121 156 aa14.52□□□□□ -0.08
VRK2-201ENST00000340157 IGKV3OR2-268A0A0C4DH90 116 aa14.52□□□□□ -0.09
VRK2-201ENST00000340157 LEPROTO15243 131 aa14.52□□□□□ -0.09
VRK2-201ENST00000340157 SPINK8P0C7L1 97 aa14.52□□□□□ -0.09
VRK2-201ENST00000340157 TRAV10A0A0B4J240 114 aa14.51□□□□□ -0.09
VRK2-201ENST00000340157 J3QQQ9 107 aa14.51□□□□□ -0.09
VRK2-201ENST00000340157 IGHV3-30-3P0DP02 117 aa14.5□□□□□ -0.09
VRK2-201ENST00000340157 HINT1P49773 126 aaPredicted RBP14.5□□□□□ -0.09
VRK2-201ENST00000340157 SEC11AP67812 179 aa14.5□□□□□ -0.09
VRK2-201ENST00000340157 MEGF8Q7Z7M0 2845 aa14.5□□□□□ -0.09
VRK2-201ENST00000340157 ZNF815PA8K554 130 aa14.5□□□□□ -0.09
VRK2-201ENST00000340157 HIGD1BQ9P298 99 aa14.5□□□□□ -0.09
VRK2-201ENST00000340157 IGHV1-58A0A0C4DH39 117 aa14.49□□□□□ -0.09
VRK2-201ENST00000340157 LINC00959A0A1B0GUT2 108 aa14.48□□□□□ -0.09
VRK2-201ENST00000340157 BATFQ16520 125 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms