RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 D6R8Y8 96 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 F8W036 122 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 MT-ND4LP03901 98 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 UQCC3Q6UW78 93 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 OR5A1Q8NGJ0 315 aa9.87□□□□□ -0.83
PRKN-201ENST00000338468 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
PRKN-201ENST00000338468 TMEM218A2RU14 115 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 NPYP01303 97 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 SLPIP03973 132 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 FCER1GP30273 86 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 C15orf56Q8N910 161 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 CLRN3Q8NCR9 226 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 CDC42SE2Q9NRR3 84 aa9.86□□□□□ -0.83
PRKN-201ENST00000338468 FOXI1Q12951 378 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 SCXQ7RTU7 201 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 C9orf163Q8N9P6 203 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 TMEM101Q96IK0 257 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 BTF3L4Q96K17 158 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 KIR2DL4Q99706 377 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 UBE2D4Q9Y2X8 147 aa9.85□□□□□ -0.83
PRKN-201ENST00000338468 LINC00959A0A1B0GUT2 108 aa9.84□□□□□ -0.83
PRKN-201ENST00000338468 hDV102S1A0JD36 115 aa9.84□□□□□ -0.83
PRKN-201ENST00000338468 PPBPP02775 128 aa9.84□□□□□ -0.83
PRKN-201ENST00000338468 CNBPP62633 177 aaKnown RBP9.84□□□□□ -0.83
PRKN-201ENST00000338468 ZNF664Q8N3J9 261 aa9.84□□□□□ -0.83
PRKN-201ENST00000338468 SMIM2Q9BVW6 85 aa9.84□□□□□ -0.83
PRKN-201ENST00000338468 PHOX2AO14813 284 aa9.83□□□□□ -0.84
PRKN-201ENST00000338468 CHAC1Q9BUX1 264 aa9.83□□□□□ -0.84
PRKN-201ENST00000338468 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
PRKN-201ENST00000338468 TMEM136Q6ZRR5 245 aa9.82□□□□□ -0.84
PRKN-201ENST00000338468 COMMD7Q86VX2 200 aa9.82□□□□□ -0.84
PRKN-201ENST00000338468 ORMDL3Q8N138 153 aa9.82□□□□□ -0.84
PRKN-201ENST00000338468 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
PRKN-201ENST00000338468 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
PRKN-201ENST00000338468 PRELID3AQ96N28 172 aa9.82□□□□□ -0.84
PRKN-201ENST00000338468 PANO1I0J062 215 aa9.81□□□□□ -0.84
PRKN-201ENST00000338468 CCL25O15444 150 aa9.81□□□□□ -0.84
PRKN-201ENST00000338468 XCL1P47992 114 aa9.81□□□□□ -0.84
PRKN-201ENST00000338468 RPL39P62891 51 aaKnown RBP9.81□□□□□ -0.84
PRKN-201ENST00000338468 RNASE13Q5GAN3 156 aaKnown RBP9.81□□□□□ -0.84
PRKN-201ENST00000338468 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
PRKN-201ENST00000338468 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
PRKN-201ENST00000338468 SEC11CQ9BY50 192 aa9.81□□□□□ -0.84
PRKN-201ENST00000338468 TCAPO15273 167 aa9.8□□□□□ -0.84
PRKN-201ENST00000338468 Q6ZUT4 128 aa9.8□□□□□ -0.84
PRKN-201ENST00000338468 IMMP2LQ96T52 175 aa9.8□□□□□ -0.84
PRKN-201ENST00000338468 GVQW2A0A096LPI5 108 aaPredicted RBP9.79□□□□□ -0.84
PRKN-201ENST00000338468 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
PRKN-201ENST00000338468 HIGD2BQ4VC39 106 aa9.79□□□□□ -0.84
PRKN-201ENST00000338468 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
PRKN-201ENST00000338468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
PRKN-201ENST00000338468 SS18Q15532 418 aa9.78□□□□□ -0.84
PRKN-201ENST00000338468 C10orf91Q5T1B1 145 aa9.78□□□□□ -0.84
PRKN-201ENST00000338468 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
PRKN-201ENST00000338468 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
PRKN-201ENST00000338468 CTDSP1Q9GZU7 261 aa9.78□□□□□ -0.84
PRKN-201ENST00000338468 AP5S1Q9NUS5 200 aa9.78□□□□□ -0.84
PRKN-201ENST00000338468 TMEM18Q96B42 140 aa9.77□□□□□ -0.85
PRKN-201ENST00000338468 LAMTOR2Q9Y2Q5 125 aa9.77□□□□□ -0.85
PRKN-201ENST00000338468 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
PRKN-201ENST00000338468 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
PRKN-201ENST00000338468 IGHV3-64A0A075B6Q5 118 aa9.75□□□□□ -0.85
PRKN-201ENST00000338468 TRAV13-1A0A0B4J241 112 aa9.75□□□□□ -0.85
PRKN-201ENST00000338468 LOC389332A0A1B0GUA5 103 aa9.75□□□□□ -0.85
PRKN-201ENST00000338468 C1orf196B1AJZ1 125 aa9.75□□□□□ -0.85
PRKN-201ENST00000338468 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
PRKN-201ENST00000338468 CIRBPQ14011 172 aaKnown RBP9.75□□□□□ -0.85
PRKN-201ENST00000338468 LINC00526Q96FQ7 95 aa9.75□□□□□ -0.85
PRKN-201ENST00000338468 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
PRKN-201ENST00000338468 CARHSP1Q9Y2V2 147 aaKnown RBP9.75□□□□□ -0.85
PRKN-201ENST00000338468 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
PRKN-201ENST00000338468 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
PRKN-201ENST00000338468 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
PRKN-201ENST00000338468 Q8N8P6 123 aa9.74□□□□□ -0.85
PRKN-201ENST00000338468 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
PRKN-201ENST00000338468 TRAV9-1A0A075B6T8 112 aa9.73□□□□□ -0.85
PRKN-201ENST00000338468 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
PRKN-201ENST00000338468 PLA2G1BP04054 148 aaKnown RBP9.73□□□□□ -0.85
PRKN-201ENST00000338468 CHTF8P0CG12 524 aa9.73□□□□□ -0.85
PRKN-201ENST00000338468 RAB5AP20339 215 aa9.73□□□□□ -0.85
PRKN-201ENST00000338468 SERTAD4-AS1Q5TG53 156 aa9.72□□□□□ -0.85
PRKN-201ENST00000338468 COX7A2LO14548 114 aa9.71□□□□□ -0.86
PRKN-201ENST00000338468 KIAA1644Q3SXP7 199 aa9.71□□□□□ -0.86
PRKN-201ENST00000338468 PRSS3P2Q8NHM4 247 aa9.71□□□□□ -0.86
PRKN-201ENST00000338468 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.86
PRKN-201ENST00000338468 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
PRKN-201ENST00000338468 IGLV4-3A0A075B6K6 122 aa9.7□□□□□ -0.86
PRKN-201ENST00000338468 COX6A2Q02221 97 aa9.7□□□□□ -0.86
PRKN-201ENST00000338468 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
PRKN-201ENST00000338468 SPACA4Q8TDM5 124 aa9.7□□□□□ -0.86
PRKN-201ENST00000338468 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
PRKN-201ENST00000338468 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
PRKN-201ENST00000338468 IFI27P40305 119 aaPredicted RBP9.69□□□□□ -0.86
PRKN-201ENST00000338468 RHEBQ15382 184 aa9.69□□□□□ -0.86
PRKN-201ENST00000338468 GNB1LQ9BYB4 327 aa9.69□□□□□ -0.86
PRKN-201ENST00000338468 S100PP25815 95 aa9.68□□□□□ -0.86
PRKN-201ENST00000338468 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms