RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FGF6P10767 208 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 GAGE6Q13070 117 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 SH2D6Q7Z4S9 175 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.77
CDK5RAP3-201ENST00000338399 PRSS29PA6NIE9 313 aa10.21□□□□□ -0.78
CDK5RAP3-201ENST00000338399 PMVKQ15126 192 aa10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 RNASE13Q5GAN3 156 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 DGAT2L7PQ6IED9 249 aa10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MRPL35Q9NZE8 188 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-201ENST00000338399 H7C423 109 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 AMMECR1LQ6DCA0 310 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 VCX2Q9H322 139 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CHTOPQ9Y3Y2 248 aaKnown RBP10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 Q6ZUT4 128 aa10.19□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MEGF8Q7Z7M0 2845 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 NPSP0C0P6 89 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 SMAGPQ0VAQ4 97 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 PAPPA-AS1Q5QFB9 102 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 VAMP8Q9BV40 100 aa10.18□□□□□ -0.78
CDK5RAP3-201ENST00000338399 F8VRH5 84 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 AMELXQ99217 191 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TMEM262E9PQX1 116 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 PAM16Q9Y3D7 125 aa10.17□□□□□ -0.78
CDK5RAP3-201ENST00000338399 hDV102S1A0JD36 115 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 DPM2O94777 84 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 IGKCP01834 107 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 LELP1Q5T871 98 aa10.16□□□□□ -0.78
CDK5RAP3-201ENST00000338399 TRAV9-2A0A087WT02 112 aa10.15□□□□□ -0.78
CDK5RAP3-201ENST00000338399 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
CDK5RAP3-201ENST00000338399 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGLV4-69A0A075B6H9 119 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGLL5B9A064 214 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 PLNP26678 52 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 MPV17L2Q567V2 206 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
CDK5RAP3-201ENST00000338399 STAB2Q8WWQ8 2551 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TIRAPP58753 221 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 ESRGQ1W209 222 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 SPATA45Q537H7 98 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 CBY1Q9Y3M2 126 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 A0A0J9YXV3 536 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 RBX1P62877 108 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 STPG4Q8N801 248 aa10.13□□□□□ -0.79
CDK5RAP3-201ENST00000338399 A0A1B0GUV1 79 aa10.12□□□□□ -0.79
CDK5RAP3-201ENST00000338399 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TCTAP57738 103 aa10.11□□□□□ -0.79
CDK5RAP3-201ENST00000338399 Q8N3U1 123 aa10.11□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TRAV8-6A0A0B4J262 113 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 UBE2D1P51668 147 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGLC3P0DOY3 106 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 ANKRD39Q53RE8 183 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
CDK5RAP3-201ENST00000338399 IGKV3OR2-268A0A0C4DH90 116 aa10.09□□□□□ -0.79
CDK5RAP3-201ENST00000338399 UQCR10Q9UDW1 63 aa10.09□□□□□ -0.79
CDK5RAP3-201ENST00000338399 BATFQ16520 125 aa10.08□□□□□ -0.8
CDK5RAP3-201ENST00000338399 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
CDK5RAP3-201ENST00000338399 WFDC10BQ8IUB3 73 aa10.08□□□□□ -0.8
CDK5RAP3-201ENST00000338399 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
CDK5RAP3-201ENST00000338399 ANGP03950 147 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-201ENST00000338399 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-30P01768 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-33P01772 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-30-3P0DP02 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGHV3-30-5P0DP03 117 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 COX6A2Q02221 97 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00269Q8N2A0 174 aa10.06□□□□□ -0.8
CDK5RAP3-201ENST00000338399 HNRNPA3P51991 378 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 ORAOV1Q8WV07 137 aa10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00588Q9Y4M8 146 aa10.05□□□□□ -0.8
CDK5RAP3-201ENST00000338399 IGKV2D-26A0A0A0MRZ7 120 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 NMUP48645 174 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 CCL18P55774 89 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 DYNC2H1Q8NCM8 4307 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 LINC00959A0A1B0GUT2 108 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 NUPR2A6NF83 97 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 SEC11AP67812 179 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 APLNQ9ULZ1 77 aa10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-201ENST00000338399 HERVK_113P63121 156 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 REG3AQ06141 175 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 KLK12Q9UKR0 248 aa10.03□□□□□ -0.8
CDK5RAP3-201ENST00000338399 DNAH7Q8WXX0 4024 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms