RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
CBX3-201ENST00000337620 TRAV9-2A0A087WT02 112 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 TRAV10A0A0B4J240 114 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 F8VRH5 84 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 H3BNG1 76 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 DPM2O94777 84 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 IGKCP01834 107 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 NHLRC4P0CG21 123 aaPredicted RBP10.18□□□□□ -0.78
CBX3-201ENST00000337620 Q6ZUT4 128 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 TIMM21Q9BVV7 248 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 PRKDCP78527 4128 aaKnown RBP10.18□□□□□ -0.78
CBX3-201ENST00000337620 SMAGPQ0VAQ4 97 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 MRPL52Q86TS9 123 aaKnown RBP10.18□□□□□ -0.78
CBX3-201ENST00000337620 PRO1933Q9H354 126 aa10.18□□□□□ -0.78
CBX3-201ENST00000337620 H7C423 109 aa10.17□□□□□ -0.78
CBX3-201ENST00000337620 NPSP0C0P6 89 aa10.17□□□□□ -0.78
CBX3-201ENST00000337620 SPATA45Q537H7 98 aa10.17□□□□□ -0.78
CBX3-201ENST00000337620 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
CBX3-201ENST00000337620 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
CBX3-201ENST00000337620 TMEM262E9PQX1 116 aa10.16□□□□□ -0.78
CBX3-201ENST00000337620 OR5A1Q8NGJ0 315 aa10.16□□□□□ -0.78
CBX3-201ENST00000337620 PLNP26678 52 aa10.16□□□□□ -0.78
CBX3-201ENST00000337620 AMELXQ99217 191 aa10.16□□□□□ -0.78
CBX3-201ENST00000337620 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
CBX3-201ENST00000337620 MRPS36P82909 103 aaKnown RBP10.15□□□□□ -0.78
CBX3-201ENST00000337620 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
CBX3-201ENST00000337620 STPG4Q8N801 248 aa10.15□□□□□ -0.78
CBX3-201ENST00000337620 TCTAP57738 103 aa10.15□□□□□ -0.79
CBX3-201ENST00000337620 LYPD5Q6UWN5 251 aa10.15□□□□□ -0.79
CBX3-201ENST00000337620 STAB2Q8WWQ8 2551 aa10.14□□□□□ -0.79
CBX3-201ENST00000337620 IGLV4-69A0A075B6H9 119 aa10.14□□□□□ -0.79
CBX3-201ENST00000337620 C2orf88Q9BSF0 95 aa10.14□□□□□ -0.79
CBX3-201ENST00000337620 CDC42SE2Q9NRR3 84 aa10.14□□□□□ -0.79
CBX3-201ENST00000337620 ZNF25P17030 456 aaPredicted RBP10.13□□□□□ -0.79
CBX3-201ENST00000337620 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
CBX3-201ENST00000337620 PKIAP61925 76 aa10.13□□□□□ -0.79
CBX3-201ENST00000337620 LELP1Q5T871 98 aa10.13□□□□□ -0.79
CBX3-201ENST00000337620 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
CBX3-201ENST00000337620 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
CBX3-201ENST00000337620 TSTD3H0UI37 97 aa10.12□□□□□ -0.79
CBX3-201ENST00000337620 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
CBX3-201ENST00000337620 IGLL5B9A064 214 aa10.11□□□□□ -0.79
CBX3-201ENST00000337620 RBX1P62877 108 aa10.11□□□□□ -0.79
CBX3-201ENST00000337620 ANKRD39Q53RE8 183 aa10.11□□□□□ -0.79
CBX3-201ENST00000337620 MPV17L2Q567V2 206 aa10.11□□□□□ -0.79
CBX3-201ENST00000337620 CHAC1Q9BUX1 264 aa10.1□□□□□ -0.79
CBX3-201ENST00000337620 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
CBX3-201ENST00000337620 IGKV3OR2-268A0A0C4DH90 116 aa10.1□□□□□ -0.79
CBX3-201ENST00000337620 ESRGQ1W209 222 aa10.1□□□□□ -0.79
CBX3-201ENST00000337620 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
CBX3-201ENST00000337620 A0A1B0GUV1 79 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 A0A1B0GV90 55 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 IGLC3P0DOY3 106 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 UBE2D1P51668 147 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 TIRAPP58753 221 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 C15orf53Q8NAA6 179 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 TRAV8-6A0A0B4J262 113 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 Q8N3U1 123 aa10.09□□□□□ -0.79
CBX3-201ENST00000337620 NMUP48645 174 aa10.07□□□□□ -0.8
CBX3-201ENST00000337620 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
CBX3-201ENST00000337620 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
CBX3-201ENST00000337620 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
CBX3-201ENST00000337620 IGKV2D-26A0A0A0MRZ7 120 aa10.06□□□□□ -0.8
CBX3-201ENST00000337620 ANGP03950 147 aaKnown RBP10.06□□□□□ -0.8
CBX3-201ENST00000337620 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
CBX3-201ENST00000337620 CLPSL2Q6UWE3 100 aa10.05□□□□□ -0.8
CBX3-201ENST00000337620 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
CBX3-201ENST00000337620 HERVK_113P61574 105 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 COX6A2Q02221 97 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 LINC00269Q8N2A0 174 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 MIEN1Q9BRT3 115 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 SEC11AP67812 179 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 UQCR10Q9UDW1 63 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 TP73-AS1Q9UF72 201 aa10.04□□□□□ -0.8
CBX3-201ENST00000337620 COX8AP10176 69 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 DDTP30046 118 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 HERVK_113P63121 156 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 PCP2Q8IVA1 136 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 SLC25A34Q6PIV7 304 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 FAM19A3Q7Z5A8 133 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
CBX3-201ENST00000337620 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
CBX3-201ENST00000337620 LINC00959A0A1B0GUT2 108 aa10.02□□□□□ -0.81
CBX3-201ENST00000337620 E9PLD3 99 aa10.02□□□□□ -0.81
CBX3-201ENST00000337620 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
CBX3-201ENST00000337620 CCL18P55774 89 aa10.01□□□□□ -0.81
CBX3-201ENST00000337620 KLK12Q9UKR0 248 aa10.01□□□□□ -0.81
CBX3-201ENST00000337620 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
CBX3-201ENST00000337620 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
CBX3-201ENST00000337620 REG3AQ06141 175 aa10.01□□□□□ -0.81
CBX3-201ENST00000337620 LINC00588Q9Y4M8 146 aa10.01□□□□□ -0.81
CBX3-201ENST00000337620 DNAH7Q8WXX0 4024 aa10□□□□□ -0.81
CBX3-201ENST00000337620 H3BRM9 83 aa10□□□□□ -0.81
CBX3-201ENST00000337620 SPINK8P0C7L1 97 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms