RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-217ENST00000334668 FUSP35637 526 aaKnown RBP eCLIP12.11□□□□□ -0.47
HLA-F-217ENST00000334668 TMEM136Q6ZRR5 245 aa12.11□□□□□ -0.47
HLA-F-217ENST00000334668 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
HLA-F-217ENST00000334668 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
HLA-F-217ENST00000334668 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
HLA-F-217ENST00000334668 TRAV8-4A0A0B4J246 113 aa12.1□□□□□ -0.47
HLA-F-217ENST00000334668 PRSS47A8MTI9 375 aa12.1□□□□□ -0.47
HLA-F-217ENST00000334668 LCE3BQ5TA77 95 aa12.1□□□□□ -0.47
HLA-F-217ENST00000334668 AMMECR1LQ6DCA0 310 aa12.1□□□□□ -0.47
HLA-F-217ENST00000334668 PRELID3AQ96N28 172 aa12.1□□□□□ -0.47
HLA-F-217ENST00000334668 HSPG2P98160 4391 aa12.09□□□□□ -0.47
HLA-F-217ENST00000334668 TCAPO15273 167 aa12.09□□□□□ -0.47
HLA-F-217ENST00000334668 FCER1GP30273 86 aa12.09□□□□□ -0.47
HLA-F-217ENST00000334668 LAMTOR2Q9Y2Q5 125 aa12.09□□□□□ -0.47
HLA-F-217ENST00000334668 LECT2O14960 151 aa12.08□□□□□ -0.48
HLA-F-217ENST00000334668 RNASEKQ6P5S7 137 aaKnown RBP12.08□□□□□ -0.48
HLA-F-217ENST00000334668 CDK2AP2O75956 126 aa12.07□□□□□ -0.48
HLA-F-217ENST00000334668 CSDC2Q9Y534 153 aaKnown RBP12.07□□□□□ -0.48
HLA-F-217ENST00000334668 S100PP25815 95 aa12.06□□□□□ -0.48
HLA-F-217ENST00000334668 RPS10P5Q9NQ39 176 aa12.06□□□□□ -0.48
HLA-F-217ENST00000334668 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 IGLV5-52A0A0A0MRZ9 124 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 APOC3P02656 99 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 KRTAP19-1Q8IUB9 90 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 OR5A1Q8NGJ0 315 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 CDC42SE2Q9NRR3 84 aa12.05□□□□□ -0.48
HLA-F-217ENST00000334668 DNAH8Q96JB1 4490 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 GCSHP23434 173 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 KRTAP10-1P60331 282 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 SVBPQ8N300 66 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 TIMM21Q9BVV7 248 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 GNB1LQ9BYB4 327 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
HLA-F-217ENST00000334668 USP17L23D6RBM5 183 aa12.03□□□□□ -0.48
HLA-F-217ENST00000334668 HLA-DQA1P01909 254 aa12.03□□□□□ -0.48
HLA-F-217ENST00000334668 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
HLA-F-217ENST00000334668 NDUFA5Q16718 116 aa12.03□□□□□ -0.48
HLA-F-217ENST00000334668 C14orf177Q52M58 125 aa12.03□□□□□ -0.48
HLA-F-217ENST00000334668 TMEM18Q96B42 140 aa12.03□□□□□ -0.48
HLA-F-217ENST00000334668 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
HLA-F-217ENST00000334668 SNAPINO95295 136 aa12.02□□□□□ -0.49
HLA-F-217ENST00000334668 COX19Q49B96 90 aa12.02□□□□□ -0.49
HLA-F-217ENST00000334668 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
HLA-F-217ENST00000334668 MAP1LC3AQ9H492 121 aa12.02□□□□□ -0.49
HLA-F-217ENST00000334668 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
HLA-F-217ENST00000334668 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
HLA-F-217ENST00000334668 LINC00959A0A1B0GUT2 108 aa12□□□□□ -0.49
HLA-F-217ENST00000334668 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
HLA-F-217ENST00000334668 Q8N8P6 123 aa12□□□□□ -0.49
HLA-F-217ENST00000334668 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
HLA-F-217ENST00000334668 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
HLA-F-217ENST00000334668 DGAT2L7PQ6IED9 249 aa11.99□□□□□ -0.49
HLA-F-217ENST00000334668 FAM104AQ969W3 186 aa11.99□□□□□ -0.49
HLA-F-217ENST00000334668 LOC389332A0A1B0GUA5 103 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 MT-ND6P03923 174 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 PRSS1P07477 247 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 RAB5AP20339 215 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 KRTAP17-1Q9BYP8 105 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
HLA-F-217ENST00000334668 K7EMI3 77 aa11.97□□□□□ -0.49
HLA-F-217ENST00000334668 CCL25O15444 150 aa11.96□□□□□ -0.49
HLA-F-217ENST00000334668 XGP55808 180 aa11.96□□□□□ -0.49
HLA-F-217ENST00000334668 MRPS36P82909 103 aaKnown RBP11.96□□□□□ -0.49
HLA-F-217ENST00000334668 FOXI1Q12951 378 aa11.96□□□□□ -0.49
HLA-F-217ENST00000334668 Q6ZUT4 128 aa11.96□□□□□ -0.49
HLA-F-217ENST00000334668 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.49
HLA-F-217ENST00000334668 TGIF2-C20orf24A0A0A6YYL0 155 aa11.95□□□□□ -0.5
HLA-F-217ENST00000334668 SLC7A5P1Q8MH63 180 aa11.95□□□□□ -0.5
HLA-F-217ENST00000334668 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
HLA-F-217ENST00000334668 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
HLA-F-217ENST00000334668 IFI27P40305 119 aaPredicted RBP11.94□□□□□ -0.5
HLA-F-217ENST00000334668 SS18Q15532 418 aa11.94□□□□□ -0.5
HLA-F-217ENST00000334668 Q6ZSA8 131 aa11.94□□□□□ -0.5
HLA-F-217ENST00000334668 C15orf56Q8N910 161 aa11.94□□□□□ -0.5
HLA-F-217ENST00000334668 YPEL4Q96NS1 127 aa11.94□□□□□ -0.5
HLA-F-217ENST00000334668 C1orf196B1AJZ1 125 aa11.93□□□□□ -0.5
HLA-F-217ENST00000334668 XCL1P47992 114 aa11.93□□□□□ -0.5
HLA-F-217ENST00000334668 ORMDL2Q53FV1 153 aa11.93□□□□□ -0.5
HLA-F-217ENST00000334668 RNASE13Q5GAN3 156 aaKnown RBP11.93□□□□□ -0.5
HLA-F-217ENST00000334668 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
HLA-F-217ENST00000334668 CNBPP62633 177 aaKnown RBP11.92□□□□□ -0.5
HLA-F-217ENST00000334668 FABP9Q0Z7S8 132 aa11.92□□□□□ -0.5
HLA-F-217ENST00000334668 CFAP161Q6P656 301 aa11.92□□□□□ -0.5
HLA-F-217ENST00000334668 OPRPNQ99935 248 aaPredicted RBP11.92□□□□□ -0.5
HLA-F-217ENST00000334668 FAM30AQ9NZY2 134 aa11.92□□□□□ -0.5
HLA-F-217ENST00000334668 LINC01546A6NGU7 62 aa11.91□□□□□ -0.5
HLA-F-217ENST00000334668 hDV102S1A0JD36 115 aa11.9□□□□□ -0.5
HLA-F-217ENST00000334668 LINC01620Q4KN68 170 aa11.9□□□□□ -0.5
HLA-F-217ENST00000334668 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
HLA-F-217ENST00000334668 C9orf163Q8N9P6 203 aa11.9□□□□□ -0.5
HLA-F-217ENST00000334668 CYSLTR1Q9Y271 337 aa11.9□□□□□ -0.5
HLA-F-217ENST00000334668 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
HLA-F-217ENST00000334668 GVQW2A0A096LPI5 108 aaPredicted RBP11.89□□□□□ -0.51
HLA-F-217ENST00000334668 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
HLA-F-217ENST00000334668 SLPIP03973 132 aa11.89□□□□□ -0.51
HLA-F-217ENST00000334668 NPSP0C0P6 89 aa11.88□□□□□ -0.51
HLA-F-217ENST00000334668 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms