RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 Q9H8V8 135 aa17.71■□□□□ 0.42
SOX1-201ENST00000330949 SORL1Q92673 2214 aa17.7■□□□□ 0.42
SOX1-201ENST00000330949 IGLV5-45A0A087WSX0 123 aa17.7■□□□□ 0.42
SOX1-201ENST00000330949 CYSTM1Q9H1C7 97 aa17.7■□□□□ 0.42
SOX1-201ENST00000330949 PF4V1P10720 104 aa17.69■□□□□ 0.42
SOX1-201ENST00000330949 CHCHD7Q9BUK0 85 aa17.69■□□□□ 0.42
SOX1-201ENST00000330949 DNAL4O96015 105 aa17.69■□□□□ 0.42
SOX1-201ENST00000330949 MALP21145 153 aa17.69■□□□□ 0.42
SOX1-201ENST00000330949 ZNF415Q09FC8 603 aa17.69■□□□□ 0.42
SOX1-201ENST00000330949 TRAV13-1A0A0B4J241 112 aa17.68■□□□□ 0.42
SOX1-201ENST00000330949 IGHG2P01859 326 aa17.68■□□□□ 0.42
SOX1-201ENST00000330949 FAM218AQ96MZ4 157 aa17.68■□□□□ 0.42
SOX1-201ENST00000330949 H3BUA1 57 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 C19orf84I3L1E1 186 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 IGKV3-20P01619 116 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 ACACBO00763 2458 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 LMO4P61968 165 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 PRIMA1Q86XR5 153 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 USP9YO00507 2555 aaPredicted RBP17.67■□□□□ 0.42
SOX1-201ENST00000330949 POLQO75417 2590 aa17.67■□□□□ 0.42
SOX1-201ENST00000330949 KIR2DL5BQ8NHK3 375 aa17.66■□□□□ 0.42
SOX1-201ENST00000330949 IGHV3-73A0A0B4J1V6 119 aa17.66■□□□□ 0.42
SOX1-201ENST00000330949 SOSTDC1Q6X4U4 206 aa17.66■□□□□ 0.42
SOX1-201ENST00000330949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.65■□□□□ 0.42
SOX1-201ENST00000330949 A0A0U1RRA0 63 aa17.65■□□□□ 0.42
SOX1-201ENST00000330949 IGKV2-29A2NJV5 120 aaPredicted RBP17.65■□□□□ 0.42
SOX1-201ENST00000330949 ZANQ9Y493 2812 aa17.65■□□□□ 0.42
SOX1-201ENST00000330949 Q6JHZ5 121 aa17.65■□□□□ 0.42
SOX1-201ENST00000330949 ZNF625Q96I27 306 aaPredicted RBP17.65■□□□□ 0.42
SOX1-201ENST00000330949 IGLV5-39A0A0G2JS06 123 aa17.64■□□□□ 0.41
SOX1-201ENST00000330949 SPINK13Q1W4C9 94 aa17.64■□□□□ 0.41
SOX1-201ENST00000330949 UPK3BQ9BT76 320 aa17.64■□□□□ 0.41
SOX1-201ENST00000330949 PRORYQ9H606 182 aa17.64■□□□□ 0.41
SOX1-201ENST00000330949 HIST2H2BCQ6DN03 193 aa17.63■□□□□ 0.41
SOX1-201ENST00000330949 HIST2H2BDQ6DRA6 164 aa17.63■□□□□ 0.41
SOX1-201ENST00000330949 K7EMT4 169 aa17.63■□□□□ 0.41
SOX1-201ENST00000330949 OVOL2Q9BRP0 275 aa17.62■□□□□ 0.41
SOX1-201ENST00000330949 PROK1P58294 105 aa17.62■□□□□ 0.41
SOX1-201ENST00000330949 SNRPD3P62318 126 aaKnown RBP17.62■□□□□ 0.41
SOX1-201ENST00000330949 LINC00467Q9BRT7 94 aa17.62■□□□□ 0.41
SOX1-201ENST00000330949 Q9HAA7 133 aa17.62■□□□□ 0.41
SOX1-201ENST00000330949 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.61■□□□□ 0.41
SOX1-201ENST00000330949 PKD1L2Q7Z442 2459 aa17.61■□□□□ 0.41
SOX1-201ENST00000330949 PF4P02776 101 aa17.6■□□□□ 0.41
SOX1-201ENST00000330949 MYO18BQ8IUG5 2567 aa17.6■□□□□ 0.41
SOX1-201ENST00000330949 DSCR8Q96T75 97 aa17.6■□□□□ 0.41
SOX1-201ENST00000330949 IGKV3D-7A0A0C4DH55 119 aa17.59■□□□□ 0.41
SOX1-201ENST00000330949 EDN2P20800 178 aa17.59■□□□□ 0.41
SOX1-201ENST00000330949 RPL28P46779 137 aaKnown RBP17.59■□□□□ 0.41
SOX1-201ENST00000330949 CACNA1AO00555 2505 aa17.58■□□□□ 0.41
SOX1-201ENST00000330949 ZFYVE26Q68DK2 2539 aa17.58■□□□□ 0.41
SOX1-201ENST00000330949 DGAT2L7PQ6IED9 249 aa17.58■□□□□ 0.4
SOX1-201ENST00000330949 EPG5Q9HCE0 2579 aa17.58■□□□□ 0.4
SOX1-201ENST00000330949 TRAV13-2A0A0B4J235 113 aa17.57■□□□□ 0.4
SOX1-201ENST00000330949 IGHV4-38-2P0DP08 117 aa17.57■□□□□ 0.4
SOX1-201ENST00000330949 COX6A2Q02221 97 aa17.57■□□□□ 0.4
SOX1-201ENST00000330949 USP17L23D6RBM5 183 aa17.57■□□□□ 0.4
SOX1-201ENST00000330949 RS1O15537 224 aa17.57■□□□□ 0.4
SOX1-201ENST00000330949 BLCAPP62952 87 aa17.57■□□□□ 0.4
SOX1-201ENST00000330949 UCNP55089 124 aa17.56■□□□□ 0.4
SOX1-201ENST00000330949 USP9XQ93008 2570 aaPredicted RBP17.56■□□□□ 0.4
SOX1-201ENST00000330949 OXTP01178 125 aa17.56■□□□□ 0.4
SOX1-201ENST00000330949 GNLYP22749 145 aa17.55■□□□□ 0.4
SOX1-201ENST00000330949 C14orf132Q9NPU4 83 aa17.55■□□□□ 0.4
SOX1-201ENST00000330949 SYNJ2BPP57105 145 aa17.55■□□□□ 0.4
SOX1-201ENST00000330949 LINC00846Q9NV44 126 aa17.54■□□□□ 0.4
SOX1-201ENST00000330949 IGHV4-61A0A0C4DH41 118 aa17.54■□□□□ 0.4
SOX1-201ENST00000330949 HOXD3P31249 432 aaPredicted RBP17.54■□□□□ 0.4
SOX1-201ENST00000330949 Q9UF83 564 aa17.54■□□□□ 0.4
SOX1-201ENST00000330949 SMIM1B2RUZ4 78 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 CRPP02741 224 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 C4orf26Q17RF5 130 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 LINC01561Q8N1V8 128 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 A0A087WVE0 104 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 H3BUX3 64 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 LINC00242Q5T6M2 205 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 FAM208BQ5VWN6 2430 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 IGHV3OR16-12A0A075B7B8 117 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 RNF152Q8N8N0 203 aa17.53■□□□□ 0.4
SOX1-201ENST00000330949 F5H768 121 aa17.52■□□□□ 0.4
SOX1-201ENST00000330949 Q5XG85 94 aa17.52■□□□□ 0.39
SOX1-201ENST00000330949 OBSCN-AS1Q96MR7 158 aa17.52■□□□□ 0.39
SOX1-201ENST00000330949 KNCNA6PVL3 124 aa17.51■□□□□ 0.39
SOX1-201ENST00000330949 K7EQG2 157 aa17.51■□□□□ 0.39
SOX1-201ENST00000330949 HTN1P15515 57 aa17.51■□□□□ 0.39
SOX1-201ENST00000330949 IGHV3-38A0A0C4DH36 116 aa17.5■□□□□ 0.39
SOX1-201ENST00000330949 PIK3CD-AS1Q5SR53 167 aa17.5■□□□□ 0.39
SOX1-201ENST00000330949 Q6ZSN1 163 aa17.5■□□□□ 0.39
SOX1-201ENST00000330949 HRCT1Q6UXD1 115 aa17.49■□□□□ 0.39
SOX1-201ENST00000330949 IGLV1-40P01703 118 aa17.48■□□□□ 0.39
SOX1-201ENST00000330949 FAM19A3Q7Z5A8 133 aa17.48■□□□□ 0.39
SOX1-201ENST00000330949 C9orf129Q5T035 196 aaKnown RBP17.48■□□□□ 0.39
SOX1-201ENST00000330949 NDUFC2-KCTD14E9PQ53 114 aa17.46■□□□□ 0.39
SOX1-201ENST00000330949 H0YGX0 51 aa17.46■□□□□ 0.39
SOX1-201ENST00000330949 A0A087WYN8 130 aa17.46■□□□□ 0.39
SOX1-201ENST00000330949 MRAPQ8TCY5 172 aa17.46■□□□□ 0.39
SOX1-201ENST00000330949 IGHV3-53P01767 116 aa17.45■□□□□ 0.38
SOX1-201ENST00000330949 RBMY1A1P0DJD3 496 aaKnown RBP17.45■□□□□ 0.38
SOX1-201ENST00000330949 RBMY1CP0DJD4 496 aa17.45■□□□□ 0.38
SOX1-201ENST00000330949 RBMY1FQ15415 496 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms