RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 C3orf84H3BNL1 204 aa15.55■□□□□ 0.08
RNF40-201ENST00000324685 FAM19A3Q7Z5A8 133 aa15.55■□□□□ 0.08
RNF40-201ENST00000324685 RIF1Q5UIP0 2472 aaKnown RBP15.55■□□□□ 0.08
RNF40-201ENST00000324685 BBC3Q96PG8 261 aaPredicted RBP15.55■□□□□ 0.08
RNF40-201ENST00000324685 NDUFA7O95182 113 aa15.55■□□□□ 0.08
RNF40-201ENST00000324685 UBE2D4Q9Y2X8 147 aa15.55■□□□□ 0.08
RNF40-201ENST00000324685 TMEM131Q92545 1883 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 PSMG3-AS1Q96PY0 264 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 CACNA1GO43497 2377 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 C11orf71Q6IPW1 123 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 SHISA2Q6UWI4 295 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 SHANK1Q9Y566 2161 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 LINC00482Q8N8I6 264 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 RNASE3P12724 160 aaKnown RBP15.54■□□□□ 0.08
RNF40-201ENST00000324685 NOTCH3Q9UM47 2321 aa15.54■□□□□ 0.08
RNF40-201ENST00000324685 COX17Q14061 63 aa15.53■□□□□ 0.08
RNF40-201ENST00000324685 IGLV4-69A0A075B6H9 119 aa15.52■□□□□ 0.08
RNF40-201ENST00000324685 Q6ZQY7 126 aa15.52■□□□□ 0.08
RNF40-201ENST00000324685 ZGRF1Q86YA3 2104 aa15.52■□□□□ 0.08
RNF40-201ENST00000324685 C2orf91Q6ZV80 131 aa15.52■□□□□ 0.08
RNF40-201ENST00000324685 A8MZ25 164 aa15.51■□□□□ 0.07
RNF40-201ENST00000324685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.51■□□□□ 0.071e-6■■■□□ 16.4
RNF40-201ENST00000324685 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.51■□□□□ 0.07
RNF40-201ENST00000324685 IGKV2-28A0A075B6P5 120 aa15.51■□□□□ 0.07
RNF40-201ENST00000324685 LINC00959A0A1B0GUT2 108 aa15.51■□□□□ 0.07
RNF40-201ENST00000324685 IGKV2D-28P01615 120 aa15.51■□□□□ 0.07
RNF40-201ENST00000324685 LELP1Q5T871 98 aa15.51■□□□□ 0.07
RNF40-201ENST00000324685 MUC7Q8TAX7 377 aa15.51■□□□□ 0.07
RNF40-201ENST00000324685 Q8N6K4 173 aa15.5■□□□□ 0.07
RNF40-201ENST00000324685 C9orf85Q96MD7 179 aa15.5■□□□□ 0.07
RNF40-201ENST00000324685 ZNF702PQ9H963 129 aa15.5■□□□□ 0.07
RNF40-201ENST00000324685 KLLNB2CW77 178 aa15.5■□□□□ 0.07
RNF40-201ENST00000324685 C22orf34Q6ZV56 151 aa15.5■□□□□ 0.07
RNF40-201ENST00000324685 CACNA1HO95180 2353 aa15.5■□□□□ 0.07
RNF40-201ENST00000324685 UBE2D1P51668 147 aa15.49■□□□□ 0.07
RNF40-201ENST00000324685 SMIM11BQ8TCY0 68 aa15.49■□□□□ 0.07
RNF40-201ENST00000324685 INAFM1C9JVW0 142 aa15.48■□□□□ 0.07
RNF40-201ENST00000324685 LOC107984640A0A0U1RRK4 108 aa15.48■□□□□ 0.07
RNF40-201ENST00000324685 A0A0U1RQV1 116 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 POLR2KP53803 58 aaKnown RBP15.47■□□□□ 0.07
RNF40-201ENST00000324685 C10orf99Q6UWK7 81 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 SNURFQ9Y675 71 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 CREBBPQ92793 2442 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 COX7CP15954 63 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 PRR9Q5T870 116 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 WFDC13Q8IUB5 93 aa15.47■□□□□ 0.07
RNF40-201ENST00000324685 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.47■□□□□ 0.07
RNF40-201ENST00000324685 ADAMTS9Q9P2N4 1935 aa15.46■□□□□ 0.07
RNF40-201ENST00000324685 Q6JHZ5 121 aa15.45■□□□□ 0.06
RNF40-201ENST00000324685 Q8N9L7 120 aa15.45■□□□□ 0.06
RNF40-201ENST00000324685 C11orf21Q9P2W6 132 aa15.45■□□□□ 0.06
RNF40-201ENST00000324685 A0A0J9YWU9 116 aa15.44■□□□□ 0.06
RNF40-201ENST00000324685 ZNF73O43830 326 aaPredicted RBP15.44■□□□□ 0.06
RNF40-201ENST00000324685 KPRPQ5T749 579 aaPredicted RBP15.44■□□□□ 0.06
RNF40-201ENST00000324685 MRGPRG-AS1Q2M3A8 158 aa15.44■□□□□ 0.06
RNF40-201ENST00000324685 PPDPFQ9H3Y8 114 aa15.44■□□□□ 0.06
RNF40-201ENST00000324685 Q8IZM0 81 aa15.44■□□□□ 0.06
RNF40-201ENST00000324685 SERP1Q9Y6X1 66 aa15.43■□□□□ 0.06
RNF40-201ENST00000324685 PCNX1Q96RV3 2341 aa15.42■□□□□ 0.06
RNF40-201ENST00000324685 LOC100131303A0A0U1RQF7 123 aa15.42■□□□□ 0.06
RNF40-201ENST00000324685 IGLV1-40P01703 118 aa15.41■□□□□ 0.06
RNF40-201ENST00000324685 A6NED7 52 aa15.41■□□□□ 0.06
RNF40-201ENST00000324685 Q6ZS46 218 aa15.41■□□□□ 0.06
RNF40-201ENST00000324685 SPINK6Q6UWN8 80 aa15.41■□□□□ 0.06
RNF40-201ENST00000324685 ZNF106Q9H2Y7 1883 aaKnown RBP15.41■□□□□ 0.06
RNF40-201ENST00000324685 UBE2D3P61077 147 aa15.4■□□□□ 0.06
RNF40-201ENST00000324685 UBE2D2P62837 147 aa15.4■□□□□ 0.06
RNF40-201ENST00000324685 CLUHP3Q96NS8 147 aa15.39■□□□□ 0.05
RNF40-201ENST00000324685 CNFNQ9BYD5 112 aa15.39■□□□□ 0.05
RNF40-201ENST00000324685 KIAA1549LQ6ZVL6 1849 aa15.39■□□□□ 0.05
RNF40-201ENST00000324685 LINC00526Q96FQ7 95 aa15.39■□□□□ 0.05
RNF40-201ENST00000324685 LINC00474Q9P2X8 69 aa15.38■□□□□ 0.05
RNF40-201ENST00000324685 CDC42SE2Q9NRR3 84 aa15.38■□□□□ 0.05
RNF40-201ENST00000324685 NBASA2RRP1 2371 aa15.38■□□□□ 0.05
RNF40-201ENST00000324685 CCDC179H3BU77 68 aa15.37■□□□□ 0.05
RNF40-201ENST00000324685 HRCT1Q6UXD1 115 aa15.37■□□□□ 0.05
RNF40-201ENST00000324685 PLAC8L1A1L4L8 177 aa15.36■□□□□ 0.05
RNF40-201ENST00000324685 XGP55808 180 aa15.36■□□□□ 0.05
RNF40-201ENST00000324685 LINC01006Q8NI28 216 aa15.36■□□□□ 0.05
RNF40-201ENST00000324685 RPL37AP8A6NKH3 93 aa15.36■□□□□ 0.05
RNF40-201ENST00000324685 Q6Q795 121 aa15.36■□□□□ 0.05
RNF40-201ENST00000324685 POM121L12Q8N7R1 296 aa15.36■□□□□ 0.05
RNF40-201ENST00000324685 FAM30AQ9NZY2 134 aa15.35■□□□□ 0.05
RNF40-201ENST00000324685 C2orf16Q68DN1 1984 aa15.35■□□□□ 0.05
RNF40-201ENST00000324685 ALPK3Q96L96 1907 aa15.34■□□□□ 0.05
RNF40-201ENST00000324685 ARHGAP21Q5T5U3 1957 aa15.34■□□□□ 0.05
RNF40-201ENST00000324685 IGIPA6NJ69 53 aa15.34■□□□□ 0.05
RNF40-201ENST00000324685 LY6G6DO95868 133 aa15.34■□□□□ 0.05
RNF40-201ENST00000324685 C18orf65Q6ZTR6 163 aa15.33■□□□□ 0.04
RNF40-201ENST00000324685 WFDC10AQ9H1F0 79 aa15.32■□□□□ 0.04
RNF40-201ENST00000324685 IGLV2-18A0A075B6J9 118 aa15.32■□□□□ 0.04
RNF40-201ENST00000324685 GAS8-AS1O95177 125 aa15.32■□□□□ 0.04
RNF40-201ENST00000324685 IGLV9-49A0A0B4J1Y8 123 aa15.32■□□□□ 0.04
RNF40-201ENST00000324685 NTM-AS1Q6ZSK4 140 aa15.31■□□□□ 0.04
RNF40-201ENST00000324685 LTBP2Q14767 1821 aa15.31■□□□□ 0.04
RNF40-201ENST00000324685 PRR4Q16378 134 aa15.31■□□□□ 0.04
RNF40-201ENST00000324685 PCNX2A6NKB5 2137 aa15.31■□□□□ 0.04
RNF40-201ENST00000324685 C10orf25Q5T742 122 aa15.31■□□□□ 0.04
RNF40-201ENST00000324685 CYSRT1A8MQ03 144 aa15.31■□□□□ 0.04
RNF40-201ENST00000324685 TRAV7A0A075B6U4 112 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms